RNA–Protein interactions for RNA: ENST00000638336.1

SLC35A3-208, Transcript of solute carrier family 35 member A3, humanhuman

TSL 1 (best) BASIC

Gene SLC35A3, Length 2,438 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-208ENST00000638336 PKD1P98161 4303 aa12.09□□□□□ -0.47
SLC35A3-208ENST00000638336 LRP1BQ9NZR2 4599 aa12.09□□□□□ -0.47
SLC35A3-208ENST00000638336 LINC00336Q6ZUF6 198 aa12.08□□□□□ -0.48
SLC35A3-208ENST00000638336 FAT2Q9NYQ8 4349 aa12.08□□□□□ -0.48
SLC35A3-208ENST00000638336 PCOTHQ58A44 107 aa12.07□□□□□ -0.48
SLC35A3-208ENST00000638336 MRPL34Q9BQ48 92 aaKnown RBP12.07□□□□□ -0.48
SLC35A3-208ENST00000638336 TP53AIP1Q9HCN2 124 aa12.07□□□□□ -0.48
SLC35A3-208ENST00000638336 Q6ZSA8 131 aa12.04□□□□□ -0.48
SLC35A3-208ENST00000638336 SSBP3-AS1Q7Z2R9 100 aa12.02□□□□□ -0.48
SLC35A3-208ENST00000638336 SPANXA2-OT1Q8N9U9 137 aa12.02□□□□□ -0.48
SLC35A3-208ENST00000638336 KRTAP13-2Q52LG2 175 aa12□□□□□ -0.49
SLC35A3-208ENST00000638336 CD164Q04900 197 aa11.98□□□□□ -0.49
SLC35A3-208ENST00000638336 VPS13BQ7Z7G8 4022 aa11.94□□□□□ -0.5
SLC35A3-208ENST00000638336 IGLV7-46A0A075B6I9 117 aa11.92□□□□□ -0.5
SLC35A3-208ENST00000638336 PSPHP1O15172 72 aa11.92□□□□□ -0.5
SLC35A3-208ENST00000638336 Q1T7F1 81 aa11.92□□□□□ -0.5
SLC35A3-208ENST00000638336 BRK1Q8WUW1 75 aa11.92□□□□□ -0.5
SLC35A3-208ENST00000638336 KRTAP21-3Q3LHN1 58 aa11.91□□□□□ -0.5
SLC35A3-208ENST00000638336 Q5W150 140 aa11.91□□□□□ -0.5
SLC35A3-208ENST00000638336 KRTAP1-4P0C5Y4 121 aa11.88□□□□□ -0.51
SLC35A3-208ENST00000638336 PKHD1P08F94 4074 aa11.88□□□□□ -0.51
SLC35A3-208ENST00000638336 C1orf195Q5TG92 126 aa11.87□□□□□ -0.51
SLC35A3-208ENST00000638336 COA5Q86WW8 74 aa11.86□□□□□ -0.51
SLC35A3-208ENST00000638336 PRO0628Q9UI54 55 aa11.85□□□□□ -0.51
SLC35A3-208ENST00000638336 LINC00313P59037 77 aa11.84□□□□□ -0.51
SLC35A3-208ENST00000638336 RETNLBQ9BQ08 111 aa11.82□□□□□ -0.52
SLC35A3-208ENST00000638336 C8orf87E5RJ46 101 aa11.82□□□□□ -0.52
SLC35A3-208ENST00000638336 PLA2G1BP04054 148 aaKnown RBP11.82□□□□□ -0.52
SLC35A3-208ENST00000638336 Q8N9P0 234 aaPredicted RBP11.8□□□□□ -0.52
SLC35A3-208ENST00000638336 A8MUN3 132 aa11.8□□□□□ -0.52
SLC35A3-208ENST00000638336 KRTAP13-3Q3SY46 172 aa11.8□□□□□ -0.52
SLC35A3-208ENST00000638336 LOC101927531A0A1B0GV80 90 aa11.78□□□□□ -0.52
SLC35A3-208ENST00000638336 SACSQ9NZJ4 4579 aa11.77□□□□□ -0.53
SLC35A3-208ENST00000638336 TYMSOSQ8TAI1 123 aa11.75□□□□□ -0.53
SLC35A3-208ENST00000638336 V9GYY9 64 aa11.73□□□□□ -0.53
SLC35A3-208ENST00000638336 C4orf48Q5BLP8 95 aa11.72□□□□□ -0.53
SLC35A3-208ENST00000638336 LIMD2Q9BT23 127 aa11.72□□□□□ -0.53
SLC35A3-208ENST00000638336 SMR3BP02814 79 aaPredicted RBP11.72□□□□□ -0.53
SLC35A3-208ENST00000638336 HRES1P13985 223 aa11.71□□□□□ -0.54
SLC35A3-208ENST00000638336 PRR15LQ9BU68 103 aa11.69□□□□□ -0.54
SLC35A3-208ENST00000638336 Q5VV11 94 aa11.68□□□□□ -0.54
SLC35A3-208ENST00000638336 PRR26Q8N8Z3 221 aa11.67□□□□□ -0.54
SLC35A3-208ENST00000638336 KRTAP16-1A8MUX0 517 aa11.66□□□□□ -0.54
SLC35A3-208ENST00000638336 FAM229AH3BQW9 127 aa11.66□□□□□ -0.54
SLC35A3-208ENST00000638336 SPAG11AQ6PDA7 123 aa11.65□□□□□ -0.54
SLC35A3-208ENST00000638336 DYNC1H1Q14204 4646 aaKnown RBP11.62□□□□□ -0.55
SLC35A3-208ENST00000638336 SPINK1P00995 79 aa11.62□□□□□ -0.55
SLC35A3-208ENST00000638336 CHKB-CPT1BH3BT56 60 aa11.6□□□□□ -0.55
SLC35A3-208ENST00000638336 A8MU10 97 aa11.57□□□□□ -0.56
SLC35A3-208ENST00000638336 LINC00304Q8N9R0 145 aa11.57□□□□□ -0.56
SLC35A3-208ENST00000638336 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
SLC35A3-208ENST00000638336 FAT1Q14517 4588 aa11.56□□□□□ -0.56
SLC35A3-208ENST00000638336 IGKV2D-30A0A075B6S6 120 aa11.54□□□□□ -0.56
SLC35A3-208ENST00000638336 A0A1B0GVY2 172 aa11.51□□□□□ -0.57
SLC35A3-208ENST00000638336 ACYP2P14621 99 aa11.51□□□□□ -0.57
SLC35A3-208ENST00000638336 LINC01558Q9Y6Z2 57 aa11.48□□□□□ -0.57
SLC35A3-208ENST00000638336 DMAC1Q96GE9 116 aa11.48□□□□□ -0.57
SLC35A3-208ENST00000638336 Q75L30 129 aa11.47□□□□□ -0.57
SLC35A3-208ENST00000638336 APOBP04114 4563 aaKnown RBP11.47□□□□□ -0.57
SLC35A3-208ENST00000638336 A6NED7 52 aa11.45□□□□□ -0.58
SLC35A3-208ENST00000638336 KRTAP10-4P60372 401 aaPredicted RBP11.42□□□□□ -0.58
SLC35A3-208ENST00000638336 KMT2CQ8NEZ4 4911 aaKnown RBP11.41□□□□□ -0.58
SLC35A3-208ENST00000638336 RYR2Q92736 4967 aa11.41□□□□□ -0.58
SLC35A3-208ENST00000638336 C9orf92A6NGG3 77 aa11.39□□□□□ -0.59
SLC35A3-208ENST00000638336 RPS29P62273 56 aaKnown RBP11.39□□□□□ -0.59
SLC35A3-208ENST00000638336 LCA10Q71F78 164 aa11.37□□□□□ -0.59
SLC35A3-208ENST00000638336 C7orf65Q6ZTY9 151 aa11.34□□□□□ -0.59
SLC35A3-208ENST00000638336 SPINK7P58062 85 aa11.33□□□□□ -0.6
SLC35A3-208ENST00000638336 SPTSSBQ8NFR3 76 aa11.31□□□□□ -0.6
SLC35A3-208ENST00000638336 PKHD1L1Q86WI1 4243 aa11.3□□□□□ -0.6
SLC35A3-208ENST00000638336 Q8N1X5 172 aa11.26□□□□□ -0.61
SLC35A3-208ENST00000638336 CDC42SE1Q9NRR8 79 aa11.24□□□□□ -0.61
SLC35A3-208ENST00000638336 PMAIP1Q13794 54 aa11.23□□□□□ -0.61
SLC35A3-208ENST00000638336 A0A1B0GU69 56 aa11.18□□□□□ -0.62
SLC35A3-208ENST00000638336 C20orf166-AS1Q96NR2 134 aa11.17□□□□□ -0.62
SLC35A3-208ENST00000638336 A8MUU9 505 aa11.17□□□□□ -0.62
SLC35A3-208ENST00000638336 ATP11AUNQ6ZP68 121 aa11.16□□□□□ -0.62
SLC35A3-208ENST00000638336 LRP1Q07954 4544 aaKnown RBP11.14□□□□□ -0.63
SLC35A3-208ENST00000638336 FLG2Q5D862 2391 aaPredicted RBP11.12□□□□□ -0.63
SLC35A3-208ENST00000638336 Q5VSD8 79 aa11.05□□□□□ -0.64
SLC35A3-208ENST00000638336 HSPG2P98160 4391 aa11.05□□□□□ -0.64
SLC35A3-208ENST00000638336 RYR3Q15413 4870 aa11.04□□□□□ -0.64
SLC35A3-208ENST00000638336 TNXBP22105 4242 aa11.02□□□□□ -0.65
SLC35A3-208ENST00000638336 A6NN06 94 aa10.99□□□□□ -0.65
SLC35A3-208ENST00000638336 KRTAP3-1Q9BYR8 98 aa10.98□□□□□ -0.65
SLC35A3-208ENST00000638336 FAT3Q8TDW7 4589 aa10.98□□□□□ -0.65
SLC35A3-208ENST00000638336 KRTAP10-8P60410 259 aa10.96□□□□□ -0.65
SLC35A3-208ENST00000638336 DMBT1Q9UGM3 2413 aaPredicted RBP10.94□□□□□ -0.66
SLC35A3-208ENST00000638336 KRTAP17-1Q9BYP8 105 aa10.94□□□□□ -0.66
SLC35A3-208ENST00000638336 UQCR11O14957 56 aa10.92□□□□□ -0.66
SLC35A3-208ENST00000638336 MIR22HGQ0VDD5 57 aa10.9□□□□□ -0.66
SLC35A3-208ENST00000638336 SPATA8Q6RVD6 105 aa10.88□□□□□ -0.67
SLC35A3-208ENST00000638336 KTN1-AS1Q86SY8 53 aa10.88□□□□□ -0.67
SLC35A3-208ENST00000638336 RYR1P21817 5038 aa10.88□□□□□ -0.67
SLC35A3-208ENST00000638336 SEC61GP60059 68 aa10.86□□□□□ -0.67
SLC35A3-208ENST00000638336 MYCBP2O75592 4640 aa10.85□□□□□ -0.67
SLC35A3-208ENST00000638336 KIAA1109Q2LD37 5005 aa10.83□□□□□ -0.68
SLC35A3-208ENST00000638336 COX6B2Q6YFQ2 88 aa10.79□□□□□ -0.68
SLC35A3-208ENST00000638336 XP32Q5T750 250 aa10.75□□□□□ -0.69
SLC35A3-208ENST00000638336 RPL37P61927 97 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms