RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 SPRR2BP35325 72 aa0.23□□□□□ -2.37
HMHB1-202ENST00000638299 HECTD1Q9ULT8 2610 aa0.23□□□□□ -2.37
HMHB1-202ENST00000638299 COL7A1Q02388 2944 aa0.23□□□□□ -2.37
HMHB1-202ENST00000638299 PDZD2O15018 2839 aa0.23□□□□□ -2.37
HMHB1-202ENST00000638299 PKHD1L1Q86WI1 4243 aa0.22□□□□□ -2.37
HMHB1-202ENST00000638299 MMP24-AS1A0A0U1RRL7 71 aa0.22□□□□□ -2.37
HMHB1-202ENST00000638299 ATP7AQ04656 1500 aa0.22□□□□□ -2.37
HMHB1-202ENST00000638299 CACNA1AO00555 2505 aa0.22□□□□□ -2.37
HMHB1-202ENST00000638299 DNAH3Q8TD57 4116 aa0.21□□□□□ -2.38
HMHB1-202ENST00000638299 PKD1L2Q7Z442 2459 aa0.21□□□□□ -2.38
HMHB1-202ENST00000638299 CUBNO60494 3623 aa0.21□□□□□ -2.38
HMHB1-202ENST00000638299 KRTAP6-2Q3LI66 62 aa0.21□□□□□ -2.38
HMHB1-202ENST00000638299 NOP10Q9NPE3 64 aaKnown RBP0.21□□□□□ -2.38
HMHB1-202ENST00000638299 PKHD1P08F94 4074 aa0.21□□□□□ -2.38
HMHB1-202ENST00000638299 SETXQ7Z333 2677 aaKnown RBP0.2□□□□□ -2.38
HMHB1-202ENST00000638299 NSD1Q96L73 2696 aaPredicted RBP0.2□□□□□ -2.38
HMHB1-202ENST00000638299 NDUFA1O15239 70 aa0.2□□□□□ -2.38
HMHB1-202ENST00000638299 LRP1BQ9NZR2 4599 aa0.2□□□□□ -2.38
HMHB1-202ENST00000638299 TRPM2O94759 1503 aa0.19□□□□□ -2.38
HMHB1-202ENST00000638299 C9orf92A6NGG3 77 aa0.19□□□□□ -2.38
HMHB1-202ENST00000638299 DCHS2Q6V1P9 2916 aa0.18□□□□□ -2.38
HMHB1-202ENST00000638299 SVEP1Q4LDE5 3571 aa0.18□□□□□ -2.38
HMHB1-202ENST00000638299 FLGP20930 4061 aaPredicted RBP0.18□□□□□ -2.38
HMHB1-202ENST00000638299 MAST4O15021 2626 aa0.18□□□□□ -2.38
HMHB1-202ENST00000638299 FLNBO75369 2602 aaKnown RBP0.18□□□□□ -2.38
HMHB1-202ENST00000638299 CREBBPQ92793 2442 aa0.18□□□□□ -2.38
HMHB1-202ENST00000638299 SPTBN4Q9H254 2564 aa0.18□□□□□ -2.38
HMHB1-202ENST00000638299 STAB1Q9NY15 2570 aa0.18□□□□□ -2.38
HMHB1-202ENST00000638299 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
HMHB1-202ENST00000638299 AKAP9Q99996 3911 aa0.17□□□□□ -2.38
HMHB1-202ENST00000638299 DNAH11Q96DT5 4516 aa0.17□□□□□ -2.38
HMHB1-202ENST00000638299 M0QY20 66 aa0.17□□□□□ -2.38
HMHB1-202ENST00000638299 MUC5BQ9HC84 5762 aaPredicted RBP0.17□□□□□ -2.38
HMHB1-202ENST00000638299 A0A0C4DFX4 3053 aa0.17□□□□□ -2.38
HMHB1-202ENST00000638299 ZZEF1O43149 2961 aa0.16□□□□□ -2.38
HMHB1-202ENST00000638299 SAMD9LQ8IVG5 1584 aa0.16□□□□□ -2.38
HMHB1-202ENST00000638299 DMXL1Q9Y485 3027 aa0.16□□□□□ -2.38
HMHB1-202ENST00000638299 DNAH7Q8WXX0 4024 aa0.16□□□□□ -2.38
HMHB1-202ENST00000638299 NF1P21359 2839 aa0.16□□□□□ -2.38
HMHB1-202ENST00000638299 ANK3Q12955 4377 aaKnown RBP0.15□□□□□ -2.38
HMHB1-202ENST00000638299 DEFB131AP59861 70 aa0.15□□□□□ -2.39
HMHB1-202ENST00000638299 DEFB110Q30KQ9 67 aa0.15□□□□□ -2.39
HMHB1-202ENST00000638299 DNAH6Q9C0G6 4158 aa0.15□□□□□ -2.39
HMHB1-202ENST00000638299 GCN1Q92616 2671 aaKnown RBP0.15□□□□□ -2.39
HMHB1-202ENST00000638299 SONP18583 2426 aaKnown RBP0.15□□□□□ -2.39
HMHB1-202ENST00000638299 SRRM2Q9UQ35 2752 aaKnown RBP0.15□□□□□ -2.39
HMHB1-202ENST00000638299 LRP2P98164 4655 aa0.14□□□□□ -2.39
HMHB1-202ENST00000638299 DNAH2Q9P225 4427 aa0.14□□□□□ -2.39
HMHB1-202ENST00000638299 SPENQ96T58 3664 aaKnown RBP0.14□□□□□ -2.39
HMHB1-202ENST00000638299 FLNCQ14315 2725 aa0.13□□□□□ -2.39
HMHB1-202ENST00000638299 SPRR2AP35326 72 aa0.13□□□□□ -2.39
HMHB1-202ENST00000638299 COL6A3P12111 3177 aa0.13□□□□□ -2.39
HMHB1-202ENST00000638299 DNAH9Q9NYC9 4486 aa0.13□□□□□ -2.39
HMHB1-202ENST00000638299 HMCN1Q96RW7 5635 aa0.12□□□□□ -2.39
HMHB1-202ENST00000638299 APOBP04114 4563 aaKnown RBP0.12□□□□□ -2.39
HMHB1-202ENST00000638299 MUC5ACP98088 5654 aa0.12□□□□□ -2.39
HMHB1-202ENST00000638299 DMBT1Q9UGM3 2413 aaPredicted RBP0.12□□□□□ -2.39
HMHB1-202ENST00000638299 TACC2O95359 2948 aa0.11□□□□□ -2.39
HMHB1-202ENST00000638299 KMT2DO14686 5537 aa0.11□□□□□ -2.39
HMHB1-202ENST00000638299 TNP1P09430 55 aa0.11□□□□□ -2.39
HMHB1-202ENST00000638299 POLR2KP53803 58 aaKnown RBP0.11□□□□□ -2.39
HMHB1-202ENST00000638299 COL6A5A8TX70 2615 aa0.11□□□□□ -2.39
HMHB1-202ENST00000638299 A8MTW9 85 aa0.1□□□□□ -2.39
HMHB1-202ENST00000638299 SPRR2EP22531 72 aa0.1□□□□□ -2.39
HMHB1-202ENST00000638299 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
HMHB1-202ENST00000638299 SETD2Q9BYW2 2564 aaPredicted RBP0.1□□□□□ -2.39
HMHB1-202ENST00000638299 ACACAQ13085 2346 aa0.1□□□□□ -2.39
HMHB1-202ENST00000638299 ZANQ9Y493 2812 aa0.09□□□□□ -2.39
HMHB1-202ENST00000638299 FAT3Q8TDW7 4589 aa0.09□□□□□ -2.39
HMHB1-202ENST00000638299 DYNC2H1Q8NCM8 4307 aaKnown RBP0.09□□□□□ -2.39
HMHB1-202ENST00000638299 MT1AP04731 61 aa0.09□□□□□ -2.4
HMHB1-202ENST00000638299 NBPF19A0A087WUL8 3843 aa0.08□□□□□ -2.4
HMHB1-202ENST00000638299 MTORP42345 2549 aa0.08□□□□□ -2.4
HMHB1-202ENST00000638299 M0QZ58 72 aa0.08□□□□□ -2.4
HMHB1-202ENST00000638299 CLPSL2Q6UWE3 100 aa0.08□□□□□ -2.4
HMHB1-202ENST00000638299 TENM2Q9NT68 2774 aa0.08□□□□□ -2.4
HMHB1-202ENST00000638299 KALRNO60229 2985 aa0.08□□□□□ -2.4
HMHB1-202ENST00000638299 FAT1Q14517 4588 aa0.08□□□□□ -2.4
HMHB1-202ENST00000638299 SPG11Q96JI7 2443 aa0.07□□□□□ -2.4
HMHB1-202ENST00000638299 DNAH1Q9P2D7 4330 aa0.07□□□□□ -2.4
HMHB1-202ENST00000638299 SPRR2FQ96RM1 72 aa0.07□□□□□ -2.4
HMHB1-202ENST00000638299 VPS13DQ5THJ4 4388 aa0.07□□□□□ -2.4
HMHB1-202ENST00000638299 LAMA5O15230 3695 aa0.07□□□□□ -2.4
HMHB1-202ENST00000638299 MDN1Q9NU22 5596 aa0.07□□□□□ -2.4
HMHB1-202ENST00000638299 MROH2BQ7Z745 1585 aa0.06□□□□□ -2.4
HMHB1-202ENST00000638299 SPTBN5Q9NRC6 3674 aaKnown RBP0.06□□□□□ -2.4
HMHB1-202ENST00000638299 MAP1AP78559 2803 aaPredicted RBP0.06□□□□□ -2.4
HMHB1-202ENST00000638299 DUOX1Q9NRD9 1551 aa0.06□□□□□ -2.4
HMHB1-202ENST00000638299 ANKHD1Q8IWZ3 2542 aaKnown RBP0.06□□□□□ -2.4
HMHB1-202ENST00000638299 ACACBO00763 2458 aa0.05□□□□□ -2.4
HMHB1-202ENST00000638299 RANBP2P49792 3224 aaKnown RBP0.05□□□□□ -2.4
HMHB1-202ENST00000638299 NBEAL2Q6ZNJ1 2754 aa0.05□□□□□ -2.4
HMHB1-202ENST00000638299 LRRK2Q5S007 2527 aa0.05□□□□□ -2.4
HMHB1-202ENST00000638299 RPL39P62891 51 aaKnown RBP0.04□□□□□ -2.4
HMHB1-202ENST00000638299 FLNAP21333 2647 aaKnown RBP0.04□□□□□ -2.4
HMHB1-202ENST00000638299 FAM186AA6NE01 2351 aa0.04□□□□□ -2.4
HMHB1-202ENST00000638299 TRIOO75962 3097 aa0.04□□□□□ -2.4
HMHB1-202ENST00000638299 HTTP42858 3142 aa0.04□□□□□ -2.4
HMHB1-202ENST00000638299 ANKRD11Q6UB99 2663 aaPredicted RBP0.03□□□□□ -2.4
HMHB1-202ENST00000638299 COL12A1Q99715 3063 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms