RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ATMQ13315 3056 aa9.41□□□□□ -0.9
CACNA1A-258ENST00000638029 COL12A1Q99715 3063 aa9.41□□□□□ -0.9
CACNA1A-258ENST00000638029 TNP1P09430 55 aa9.39□□□□□ -0.91
CACNA1A-258ENST00000638029 P0C880 135 aa9.38□□□□□ -0.91
CACNA1A-258ENST00000638029 FRYLO94915 3013 aa9.37□□□□□ -0.91
CACNA1A-258ENST00000638029 WDFY3Q8IZQ1 3526 aa9.36□□□□□ -0.91
CACNA1A-258ENST00000638029 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
CACNA1A-258ENST00000638029 BOD1L1Q8NFC6 3051 aa9.33□□□□□ -0.92
CACNA1A-258ENST00000638029 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
CACNA1A-258ENST00000638029 CHD9Q3L8U1 2897 aa9.32□□□□□ -0.92
CACNA1A-258ENST00000638029 IGSF10Q6WRI0 2623 aa9.24□□□□□ -0.93
CACNA1A-258ENST00000638029 UTP20O75691 2785 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-258ENST00000638029 LOC400499M0QZD8 3231 aa9.23□□□□□ -0.93
CACNA1A-258ENST00000638029 NBPF19A0A087WUL8 3843 aa9.22□□□□□ -0.93
CACNA1A-258ENST00000638029 KRTAP4-16G5E9R7 235 aaPredicted RBP9.21□□□□□ -0.94
CACNA1A-258ENST00000638029 ZFHX4Q86UP3 3567 aa9.2□□□□□ -0.94
CACNA1A-258ENST00000638029 ITPR1Q14643 2758 aa9.16□□□□□ -0.94
CACNA1A-258ENST00000638029 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-258ENST00000638029 ADGRG4Q8IZF6 3080 aa9.14□□□□□ -0.95
CACNA1A-258ENST00000638029 DCHS1Q96JQ0 3298 aa9.13□□□□□ -0.95
CACNA1A-258ENST00000638029 KRTAP10-10P60014 251 aa9.13□□□□□ -0.95
CACNA1A-258ENST00000638029 KRTAP29-1A8MX34 341 aaPredicted RBP9.13□□□□□ -0.95
CACNA1A-258ENST00000638029 RPS29P62273 56 aaKnown RBP9.11□□□□□ -0.95
CACNA1A-258ENST00000638029 TNRC18O15417 2968 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-258ENST00000638029 LAMA5O15230 3695 aa9.09□□□□□ -0.95
CACNA1A-258ENST00000638029 TACC2O95359 2948 aa9.05□□□□□ -0.96
CACNA1A-258ENST00000638029 KRTAP11-1Q8IUC1 163 aa9.05□□□□□ -0.96
CACNA1A-258ENST00000638029 EYSQ5T1H1 3165 aa9.02□□□□□ -0.97
CACNA1A-258ENST00000638029 HIVEP1P15822 2718 aa8.99□□□□□ -0.97
CACNA1A-258ENST00000638029 NBEAQ8NFP9 2946 aa8.98□□□□□ -0.97
CACNA1A-258ENST00000638029 DMXL1Q9Y485 3027 aa8.97□□□□□ -0.97
CACNA1A-258ENST00000638029 PRO2289Q9P1D8 64 aa8.96□□□□□ -0.98
CACNA1A-258ENST00000638029 CELSR2Q9HCU4 2923 aa8.93□□□□□ -0.98
CACNA1A-258ENST00000638029 Q6ZRN7 208 aaPredicted RBP8.93□□□□□ -0.98
CACNA1A-258ENST00000638029 CELSR1Q9NYQ6 3014 aa8.91□□□□□ -0.98
CACNA1A-258ENST00000638029 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.98
CACNA1A-258ENST00000638029 RELNP78509 3460 aa8.87□□□□□ -0.99
CACNA1A-258ENST00000638029 TENM1Q9UKZ4 2725 aa8.84□□□□□ -1
CACNA1A-258ENST00000638029 KRTAP7-1Q8IUC3 87 aa8.79□□□□□ -1
CACNA1A-258ENST00000638029 KRTAP13-1Q8IUC0 172 aa8.75□□□□□ -1.01
CACNA1A-258ENST00000638029 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
CACNA1A-258ENST00000638029 FLNCQ14315 2725 aa8.73□□□□□ -1.01
CACNA1A-258ENST00000638029 CSMD1Q96PZ7 3565 aa8.72□□□□□ -1.01
CACNA1A-258ENST00000638029 H0YAA0 97 aa8.7□□□□□ -1.02
CACNA1A-258ENST00000638029 DCHS2Q6V1P9 2916 aa8.7□□□□□ -1.02
CACNA1A-258ENST00000638029 SPENQ96T58 3664 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-258ENST00000638029 NF1P21359 2839 aa8.67□□□□□ -1.02
CACNA1A-258ENST00000638029 XP32Q5T750 250 aa8.66□□□□□ -1.02
CACNA1A-258ENST00000638029 NIPBLQ6KC79 2804 aaeCLIP8.58□□□□□ -1.04
CACNA1A-258ENST00000638029 KRTAP21-3Q3LHN1 58 aa8.56□□□□□ -1.04
CACNA1A-258ENST00000638029 FBN2P35556 2912 aa8.56□□□□□ -1.04
CACNA1A-258ENST00000638029 SMG1Q96Q15 3661 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-258ENST00000638029 ZFHX3Q15911 3703 aa8.5□□□□□ -1.05
CACNA1A-258ENST00000638029 TENM3Q9P273 2699 aa8.49□□□□□ -1.05
CACNA1A-258ENST00000638029 TENM4Q6N022 2769 aa8.48□□□□□ -1.05
CACNA1A-258ENST00000638029 CRCT1Q9UGL9 99 aa8.46□□□□□ -1.06
CACNA1A-258ENST00000638029 ZANQ9Y493 2812 aa8.45□□□□□ -1.06
CACNA1A-258ENST00000638029 VWFP04275 2813 aa8.44□□□□□ -1.06
CACNA1A-258ENST00000638029 TPRXLQ17RH7 258 aa8.43□□□□□ -1.06
CACNA1A-258ENST00000638029 TGP01266 2768 aa8.42□□□□□ -1.06
CACNA1A-258ENST00000638029 PKD1L1Q8TDX9 2849 aa8.41□□□□□ -1.06
CACNA1A-258ENST00000638029 PDZD2O15018 2839 aa8.41□□□□□ -1.06
CACNA1A-258ENST00000638029 KRTAP12-2P59991 146 aa8.4□□□□□ -1.06
CACNA1A-258ENST00000638029 CUBNO60494 3623 aa8.39□□□□□ -1.07
CACNA1A-258ENST00000638029 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
CACNA1A-258ENST00000638029 DMDP11532 3685 aa8.35□□□□□ -1.07
CACNA1A-258ENST00000638029 HRNRQ86YZ3 2850 aaPredicted RBP8.34□□□□□ -1.07
CACNA1A-258ENST00000638029 MXRA5Q9NR99 2828 aa8.24□□□□□ -1.09
CACNA1A-258ENST00000638029 MUC3AQ02505 3323 aa8.22□□□□□ -1.09
CACNA1A-258ENST00000638029 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.1
CACNA1A-258ENST00000638029 KRTAP15-1Q3LI76 137 aa8.21□□□□□ -1.1
CACNA1A-258ENST00000638029 KRTAP13-3Q3SY46 172 aa8.19□□□□□ -1.1
CACNA1A-258ENST00000638029 TENM2Q9NT68 2774 aa8.14□□□□□ -1.11
CACNA1A-258ENST00000638029 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
CACNA1A-258ENST00000638029 SVEP1Q4LDE5 3571 aa8.1□□□□□ -1.11
CACNA1A-258ENST00000638029 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
CACNA1A-258ENST00000638029 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
CACNA1A-258ENST00000638029 CSMD3Q7Z407 3707 aa7.94□□□□□ -1.14
CACNA1A-258ENST00000638029 COL7A1Q02388 2944 aa7.93□□□□□ -1.14
CACNA1A-258ENST00000638029 VPS13CQ709C8 3753 aa7.88□□□□□ -1.15
CACNA1A-258ENST00000638029 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
CACNA1A-258ENST00000638029 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
CACNA1A-258ENST00000638029 INE1O15225 51 aa7.74□□□□□ -1.17
CACNA1A-258ENST00000638029 BSNQ9UPA5 3926 aa7.71□□□□□ -1.18
CACNA1A-258ENST00000638029 FBN1P35555 2871 aaKnown RBP7.65□□□□□ -1.19
CACNA1A-258ENST00000638029 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
CACNA1A-258ENST00000638029 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
CACNA1A-258ENST00000638029 KRTAP10-6P60371 365 aaPredicted RBP7.55□□□□□ -1.2
CACNA1A-258ENST00000638029 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
CACNA1A-258ENST00000638029 OTOGQ6ZRI0 2925 aa7.5□□□□□ -1.21
CACNA1A-258ENST00000638029 KRTAP10-5P60370 271 aa7.48□□□□□ -1.21
CACNA1A-258ENST00000638029 KRTAP3-1Q9BYR8 98 aa7.44□□□□□ -1.22
CACNA1A-258ENST00000638029 AKAP9Q99996 3911 aa7.43□□□□□ -1.22
CACNA1A-258ENST00000638029 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
CACNA1A-258ENST00000638029 ANK3Q12955 4377 aaKnown RBP7.24□□□□□ -1.25
CACNA1A-258ENST00000638029 ZNF469Q96JG9 3925 aaPredicted RBP7.19□□□□□ -1.26
CACNA1A-258ENST00000638029 KRTAP12-3P60328 96 aa7.18□□□□□ -1.26
CACNA1A-258ENST00000638029 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
CACNA1A-258ENST00000638029 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
CACNA1A-258ENST00000638029 HUWE1Q7Z6Z7 4374 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms