RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 H0Y9P7 68 aa8.88□□□□□ -0.99
SCN8A-214ENST00000637709 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
SCN8A-214ENST00000637709 C5orf47Q569G3 176 aa8.87□□□□□ -0.99
SCN8A-214ENST00000637709 NDUFC1O43677 76 aa8.85□□□□□ -0.99
SCN8A-214ENST00000637709 PRR26Q8N8Z3 221 aa8.85□□□□□ -0.99
SCN8A-214ENST00000637709 ZCCHC13Q8WW36 166 aaKnown RBP8.85□□□□□ -0.99
SCN8A-214ENST00000637709 LINC00336Q6ZUF6 198 aa8.84□□□□□ -0.99
SCN8A-214ENST00000637709 MP68P56378 58 aa8.83□□□□□ -1
SCN8A-214ENST00000637709 TYMSOSQ8TAI1 123 aa8.82□□□□□ -1
SCN8A-214ENST00000637709 C1orf195Q5TG92 126 aa8.8□□□□□ -1
SCN8A-214ENST00000637709 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
SCN8A-214ENST00000637709 CD164Q04900 197 aa8.79□□□□□ -1
SCN8A-214ENST00000637709 FAM229BQ4G0N7 80 aa8.79□□□□□ -1
SCN8A-214ENST00000637709 RETNLBQ9BQ08 111 aa8.79□□□□□ -1
SCN8A-214ENST00000637709 TRAV22A0A0B4J277 110 aa8.79□□□□□ -1
SCN8A-214ENST00000637709 RPS28P62857 69 aaKnown RBP8.79□□□□□ -1
SCN8A-214ENST00000637709 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
SCN8A-214ENST00000637709 MRPL34Q9BQ48 92 aaKnown RBP8.79□□□□□ -1
SCN8A-214ENST00000637709 PCOTHQ58A44 107 aa8.77□□□□□ -1.01
SCN8A-214ENST00000637709 LRP1Q07954 4544 aaKnown RBP8.77□□□□□ -1.01
SCN8A-214ENST00000637709 SERP1Q9Y6X1 66 aa8.77□□□□□ -1.01
SCN8A-214ENST00000637709 C4orf48Q5BLP8 95 aa8.74□□□□□ -1.01
SCN8A-214ENST00000637709 Q5W150 140 aa8.74□□□□□ -1.01
SCN8A-214ENST00000637709 PKHD1L1Q86WI1 4243 aa8.73□□□□□ -1.01
SCN8A-214ENST00000637709 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
SCN8A-214ENST00000637709 C4orf26Q17RF5 130 aa8.72□□□□□ -1.01
SCN8A-214ENST00000637709 HSPG2P98160 4391 aa8.7□□□□□ -1.02
SCN8A-214ENST00000637709 LINC00313P59037 77 aa8.7□□□□□ -1.02
SCN8A-214ENST00000637709 Q5XG85 94 aa8.69□□□□□ -1.02
SCN8A-214ENST00000637709 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
SCN8A-214ENST00000637709 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
SCN8A-214ENST00000637709 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
SCN8A-214ENST00000637709 ATP5EP56381 51 aaPredicted RBP8.67□□□□□ -1.02
SCN8A-214ENST00000637709 MPLKIPQ8TAP9 179 aa8.67□□□□□ -1.02
SCN8A-214ENST00000637709 TP53AIP1Q9HCN2 124 aa8.67□□□□□ -1.02
SCN8A-214ENST00000637709 LIMD2Q9BT23 127 aa8.66□□□□□ -1.02
SCN8A-214ENST00000637709 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
SCN8A-214ENST00000637709 SPINK1P00995 79 aa8.63□□□□□ -1.03
SCN8A-214ENST00000637709 EPPK1P58107 5090 aaKnown RBP8.63□□□□□ -1.03
SCN8A-214ENST00000637709 MYCBP2O75592 4640 aa8.62□□□□□ -1.03
SCN8A-214ENST00000637709 KRTAP17-1Q9BYP8 105 aa8.62□□□□□ -1.03
SCN8A-214ENST00000637709 H3BPC8 53 aa8.6□□□□□ -1.03
SCN8A-214ENST00000637709 KRTAP16-1A8MUX0 517 aa8.6□□□□□ -1.03
SCN8A-214ENST00000637709 C8orf87E5RJ46 101 aa8.6□□□□□ -1.03
SCN8A-214ENST00000637709 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
SCN8A-214ENST00000637709 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
SCN8A-214ENST00000637709 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
SCN8A-214ENST00000637709 SVIPQ8NHG7 77 aa8.58□□□□□ -1.04
SCN8A-214ENST00000637709 SMIM26A0A096LP01 95 aa8.58□□□□□ -1.04
SCN8A-214ENST00000637709 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
SCN8A-214ENST00000637709 RYR1P21817 5038 aa8.56□□□□□ -1.04
SCN8A-214ENST00000637709 CYP4F30PQ9H0H9 118 aa8.55□□□□□ -1.04
SCN8A-214ENST00000637709 Q5VSD8 79 aa8.55□□□□□ -1.04
SCN8A-214ENST00000637709 TNXBP22105 4242 aa8.54□□□□□ -1.04
SCN8A-214ENST00000637709 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
SCN8A-214ENST00000637709 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
SCN8A-214ENST00000637709 IGLV7-46A0A075B6I9 117 aa8.51□□□□□ -1.05
SCN8A-214ENST00000637709 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
SCN8A-214ENST00000637709 IGKV2-30P06310 120 aa8.5□□□□□ -1.05
SCN8A-214ENST00000637709 Q8N1X5 172 aa8.49□□□□□ -1.05
SCN8A-214ENST00000637709 LOC101927531A0A1B0GV80 90 aa8.48□□□□□ -1.05
SCN8A-214ENST00000637709 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
SCN8A-214ENST00000637709 COA5Q86WW8 74 aa8.47□□□□□ -1.05
SCN8A-214ENST00000637709 PSPHP1O15172 72 aa8.45□□□□□ -1.06
SCN8A-214ENST00000637709 FAT3Q8TDW7 4589 aa8.45□□□□□ -1.06
SCN8A-214ENST00000637709 HRES1P13985 223 aa8.45□□□□□ -1.06
SCN8A-214ENST00000637709 RPS29P62273 56 aaKnown RBP8.41□□□□□ -1.06
SCN8A-214ENST00000637709 A8MUN3 132 aa8.35□□□□□ -1.07
SCN8A-214ENST00000637709 KRTAP10-8P60410 259 aa8.33□□□□□ -1.08
SCN8A-214ENST00000637709 Q1T7F1 81 aa8.32□□□□□ -1.08
SCN8A-214ENST00000637709 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
SCN8A-214ENST00000637709 ABCA13Q86UQ4 5058 aa8.29□□□□□ -1.08
SCN8A-214ENST00000637709 PRR15LQ9BU68 103 aa8.28□□□□□ -1.08
SCN8A-214ENST00000637709 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
SCN8A-214ENST00000637709 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
SCN8A-214ENST00000637709 DMAC1Q96GE9 116 aa8.26□□□□□ -1.09
SCN8A-214ENST00000637709 C20orf166-AS1Q96NR2 134 aa8.26□□□□□ -1.09
SCN8A-214ENST00000637709 A8MUU9 505 aa8.25□□□□□ -1.09
SCN8A-214ENST00000637709 ACYP2P14621 99 aa8.25□□□□□ -1.09
SCN8A-214ENST00000637709 LPAP08519 4548 aa8.24□□□□□ -1.09
SCN8A-214ENST00000637709 A8MU10 97 aa8.23□□□□□ -1.09
SCN8A-214ENST00000637709 CHKB-CPT1BH3BT56 60 aa8.23□□□□□ -1.09
SCN8A-214ENST00000637709 MT1HL1P0DM35 61 aa8.23□□□□□ -1.09
SCN8A-214ENST00000637709 Q5VV11 94 aa8.23□□□□□ -1.09
SCN8A-214ENST00000637709 SPINK7P58062 85 aa8.18□□□□□ -1.1
SCN8A-214ENST00000637709 LRP2P98164 4655 aa8.18□□□□□ -1.1
SCN8A-214ENST00000637709 V9GYY9 64 aa8.15□□□□□ -1.1
SCN8A-214ENST00000637709 Q75L30 129 aa8.11□□□□□ -1.11
SCN8A-214ENST00000637709 XP32Q5T750 250 aa8.11□□□□□ -1.11
SCN8A-214ENST00000637709 LINC01558Q9Y6Z2 57 aa8.1□□□□□ -1.11
SCN8A-214ENST00000637709 KRTAP3-1Q9BYR8 98 aa8.1□□□□□ -1.11
SCN8A-214ENST00000637709 ATP11AUNQ6ZP68 121 aa8.08□□□□□ -1.12
SCN8A-214ENST00000637709 PRO0628Q9UI54 55 aa8.08□□□□□ -1.12
SCN8A-214ENST00000637709 A6NED7 52 aa8.07□□□□□ -1.12
SCN8A-214ENST00000637709 HERC2O95714 4834 aa8.04□□□□□ -1.12
SCN8A-214ENST00000637709 RPL37P61927 97 aaKnown RBP8.02□□□□□ -1.13
SCN8A-214ENST00000637709 LCA10Q71F78 164 aa8.01□□□□□ -1.13
SCN8A-214ENST00000637709 A0A1B0GU69 56 aa7.98□□□□□ -1.13
SCN8A-214ENST00000637709 SPTSSBQ8NFR3 76 aa7.95□□□□□ -1.14
SCN8A-214ENST00000637709 COX6B2Q6YFQ2 88 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms