RNA–Protein interactions for RNA: ENST00000637266.2

SCN2A-215, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-215ENST00000637266 A0A0C4DFX4 3053 aa3.23□□□□□ -1.89
SCN2A-215ENST00000637266 CHD7Q9P2D1 2997 aa3.22□□□□□ -1.89
SCN2A-215ENST00000637266 C5orf42Q9H799 3197 aa3.21□□□□□ -1.9
SCN2A-215ENST00000637266 KALRNO60229 2985 aa3.2□□□□□ -1.9
SCN2A-215ENST00000637266 CFAP54Q96N23 3096 aa3.2□□□□□ -1.9
SCN2A-215ENST00000637266 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
SCN2A-215ENST00000637266 MXRA5Q9NR99 2828 aa3.18□□□□□ -1.9
SCN2A-215ENST00000637266 MGAQ8IWI9 3026 aa3.18□□□□□ -1.9
SCN2A-215ENST00000637266 LRBAP50851 2863 aa3.17□□□□□ -1.9
SCN2A-215ENST00000637266 TENM2Q9NT68 2774 aa3.16□□□□□ -1.9
SCN2A-215ENST00000637266 LAMA1P25391 3075 aa3.15□□□□□ -1.91
SCN2A-215ENST00000637266 KRTAP3-2Q9BYR7 98 aa3.14□□□□□ -1.91
SCN2A-215ENST00000637266 NF1P21359 2839 aa3.11□□□□□ -1.91
SCN2A-215ENST00000637266 FRYQ5TBA9 3013 aa3.1□□□□□ -1.91
SCN2A-215ENST00000637266 HRNRQ86YZ3 2850 aaPredicted RBP3.1□□□□□ -1.91
SCN2A-215ENST00000637266 PCNTO95613 3336 aa3.09□□□□□ -1.91
SCN2A-215ENST00000637266 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
SCN2A-215ENST00000637266 KRTAP3-3Q9BYR6 98 aa3.08□□□□□ -1.92
SCN2A-215ENST00000637266 GOLGB1Q14789 3259 aaKnown RBP3.07□□□□□ -1.92
SCN2A-215ENST00000637266 MT1HL1P0DM35 61 aa3.05□□□□□ -1.92
SCN2A-215ENST00000637266 DCHS2Q6V1P9 2916 aa3.04□□□□□ -1.92
SCN2A-215ENST00000637266 ASH1LQ9NR48 2969 aaKnown RBP3.04□□□□□ -1.92
SCN2A-215ENST00000637266 ZANQ9Y493 2812 aa3.04□□□□□ -1.92
SCN2A-215ENST00000637266 CELSR2Q9HCU4 2923 aa3.03□□□□□ -1.92
SCN2A-215ENST00000637266 PDZD2O15018 2839 aa3.02□□□□□ -1.93
SCN2A-215ENST00000637266 LAMA2P24043 3122 aaKnown RBP3.02□□□□□ -1.93
SCN2A-215ENST00000637266 KRTAP10-4P60372 401 aaPredicted RBP3.01□□□□□ -1.93
SCN2A-215ENST00000637266 WDFY4Q6ZS81 3184 aa3.01□□□□□ -1.93
SCN2A-215ENST00000637266 HUWE1Q7Z6Z7 4374 aaKnown RBP3.01□□□□□ -1.93
SCN2A-215ENST00000637266 PRUNE2Q8WUY3 3088 aa2.99□□□□□ -1.93
SCN2A-215ENST00000637266 NBEAQ8NFP9 2946 aa2.99□□□□□ -1.93
SCN2A-215ENST00000637266 HTTP42858 3142 aa2.98□□□□□ -1.93
SCN2A-215ENST00000637266 ALMS1Q8TCU4 4167 aa2.98□□□□□ -1.93
SCN2A-215ENST00000637266 TRIOO75962 3097 aa2.98□□□□□ -1.93
SCN2A-215ENST00000637266 TACC2O95359 2948 aa2.97□□□□□ -1.93
SCN2A-215ENST00000637266 DMXL2Q8TDJ6 3036 aa2.96□□□□□ -1.94
SCN2A-215ENST00000637266 FREM2Q5SZK8 3169 aa2.96□□□□□ -1.94
SCN2A-215ENST00000637266 VPS13AQ96RL7 3174 aa2.95□□□□□ -1.94
SCN2A-215ENST00000637266 UTRNP46939 3433 aa2.95□□□□□ -1.94
SCN2A-215ENST00000637266 MEGF8Q7Z7M0 2845 aa2.95□□□□□ -1.94
SCN2A-215ENST00000637266 ZZEF1O43149 2961 aa2.94□□□□□ -1.94
SCN2A-215ENST00000637266 FRYLO94915 3013 aa2.94□□□□□ -1.94
SCN2A-215ENST00000637266 RANBP2P49792 3224 aaKnown RBP2.94□□□□□ -1.94
SCN2A-215ENST00000637266 VWFP04275 2813 aa2.91□□□□□ -1.94
SCN2A-215ENST00000637266 ATMQ13315 3056 aa2.91□□□□□ -1.94
SCN2A-215ENST00000637266 ADGRG4Q8IZF6 3080 aa2.91□□□□□ -1.94
SCN2A-215ENST00000637266 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
SCN2A-215ENST00000637266 RYR1P21817 5038 aa2.89□□□□□ -1.95
SCN2A-215ENST00000637266 COL12A1Q99715 3063 aa2.89□□□□□ -1.95
SCN2A-215ENST00000637266 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
SCN2A-215ENST00000637266 PKD1L1Q8TDX9 2849 aa2.85□□□□□ -1.95
SCN2A-215ENST00000637266 TNRC18O15417 2968 aaPredicted RBP2.85□□□□□ -1.95
SCN2A-215ENST00000637266 MKI67P46013 3256 aaKnown RBP2.84□□□□□ -1.95
SCN2A-215ENST00000637266 OTOGQ6ZRI0 2925 aa2.84□□□□□ -1.96
SCN2A-215ENST00000637266 UNC80Q8N2C7 3258 aa2.83□□□□□ -1.96
SCN2A-215ENST00000637266 KRTAP8-1Q8IUC2 63 aa2.82□□□□□ -1.96
SCN2A-215ENST00000637266 FBN3Q75N90 2809 aa2.82□□□□□ -1.96
SCN2A-215ENST00000637266 FBN2P35556 2912 aa2.82□□□□□ -1.96
SCN2A-215ENST00000637266 LAMA3Q16787 3333 aa2.81□□□□□ -1.96
SCN2A-215ENST00000637266 BOD1L1Q8NFC6 3051 aa2.81□□□□□ -1.96
SCN2A-215ENST00000637266 REV3LO60673 3130 aa2.78□□□□□ -1.96
SCN2A-215ENST00000637266 CELSR1Q9NYQ6 3014 aa2.78□□□□□ -1.96
SCN2A-215ENST00000637266 CRYBG3Q68DQ2 2970 aa2.76□□□□□ -1.97
SCN2A-215ENST00000637266 XIRP2A4UGR9 3374 aa2.75□□□□□ -1.97
SCN2A-215ENST00000637266 CELSR3Q9NYQ7 3312 aa2.75□□□□□ -1.97
SCN2A-215ENST00000637266 MYCBP2O75592 4640 aa2.74□□□□□ -1.97
SCN2A-215ENST00000637266 EYSQ5T1H1 3165 aa2.73□□□□□ -1.97
SCN2A-215ENST00000637266 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
SCN2A-215ENST00000637266 KRTAP10-5P60370 271 aa2.71□□□□□ -1.98
SCN2A-215ENST00000637266 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
SCN2A-215ENST00000637266 LORP23490 312 aaPredicted RBP2.7□□□□□ -1.98
SCN2A-215ENST00000637266 DMXL1Q9Y485 3027 aa2.69□□□□□ -1.98
SCN2A-215ENST00000637266 DNAH2Q9P225 4427 aa2.69□□□□□ -1.98
SCN2A-215ENST00000637266 COL6A3P12111 3177 aa2.68□□□□□ -1.98
SCN2A-215ENST00000637266 CFAP47Q6ZTR5 3102 aa2.68□□□□□ -1.98
SCN2A-215ENST00000637266 BRCA2P51587 3418 aa2.67□□□□□ -1.98
SCN2A-215ENST00000637266 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
SCN2A-215ENST00000637266 VCANP13611 3396 aa2.66□□□□□ -1.98
SCN2A-215ENST00000637266 SRRM2Q9UQ35 2752 aaKnown RBP2.66□□□□□ -1.98
SCN2A-215ENST00000637266 MT1HP80294 61 aa2.65□□□□□ -1.98
SCN2A-215ENST00000637266 MT2AP02795 61 aa2.65□□□□□ -1.99
SCN2A-215ENST00000637266 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.99
SCN2A-215ENST00000637266 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
SCN2A-215ENST00000637266 FBN1P35555 2871 aaKnown RBP2.64□□□□□ -1.99
SCN2A-215ENST00000637266 DNAH1Q9P2D7 4330 aa2.63□□□□□ -1.99
SCN2A-215ENST00000637266 COL7A1Q02388 2944 aa2.63□□□□□ -1.99
SCN2A-215ENST00000637266 DYNC1H1Q14204 4646 aaKnown RBP2.61□□□□□ -1.99
SCN2A-215ENST00000637266 CDH23Q9H251 3354 aa2.59□□□□□ -2
SCN2A-215ENST00000637266 DNAH10Q8IVF4 4471 aa2.59□□□□□ -2
SCN2A-215ENST00000637266 FAT2Q9NYQ8 4349 aa2.58□□□□□ -2
SCN2A-215ENST00000637266 KRTAP19-5Q3LI72 72 aa2.58□□□□□ -2
SCN2A-215ENST00000637266 DNAH14Q0VDD8 3507 aa2.56□□□□□ -2
SCN2A-215ENST00000637266 DNAH3Q8TD57 4116 aa2.55□□□□□ -2
SCN2A-215ENST00000637266 DNAH11Q96DT5 4516 aa2.53□□□□□ -2
SCN2A-215ENST00000637266 DNAH6Q9C0G6 4158 aa2.53□□□□□ -2
SCN2A-215ENST00000637266 KRTAP4-5Q9BYR2 181 aa2.53□□□□□ -2
SCN2A-215ENST00000637266 SZT2Q5T011 3432 aa2.52□□□□□ -2.01
SCN2A-215ENST00000637266 USP34Q70CQ2 3546 aa2.52□□□□□ -2.01
SCN2A-215ENST00000637266 MT1FP04733 61 aa2.51□□□□□ -2.01
SCN2A-215ENST00000637266 CMYA5Q8N3K9 4069 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms