RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 MT1HL1P0DM35 61 aa12.02□□□□□ -0.48
CLN8-213ENST00000637156 LIMD2Q9BT23 127 aa12.02□□□□□ -0.48
CLN8-213ENST00000637156 TRAV7A0A075B6U4 112 aa12.01□□□□□ -0.49
CLN8-213ENST00000637156 IGKV4-1P06312 121 aa12.01□□□□□ -0.49
CLN8-213ENST00000637156 C1orf195Q5TG92 126 aa12.01□□□□□ -0.49
CLN8-213ENST00000637156 J3KT08 172 aa11.98□□□□□ -0.49
CLN8-213ENST00000637156 K7EQZ3 153 aa11.97□□□□□ -0.49
CLN8-213ENST00000637156 OXTP01178 125 aa11.97□□□□□ -0.49
CLN8-213ENST00000637156 A8MWP4 228 aa11.95□□□□□ -0.5
CLN8-213ENST00000637156 DMBT1Q9UGM3 2413 aaPredicted RBP11.94□□□□□ -0.5
CLN8-213ENST00000637156 PRR15Q8IV56 129 aa11.92□□□□□ -0.5
CLN8-213ENST00000637156 TMEM258P61165 79 aa11.91□□□□□ -0.5
CLN8-213ENST00000637156 KRTAP29-1A8MX34 341 aaPredicted RBP11.9□□□□□ -0.5
CLN8-213ENST00000637156 NDUFB1O75438 58 aa11.88□□□□□ -0.51
CLN8-213ENST00000637156 KLKP1Q107X0 134 aa11.85□□□□□ -0.51
CLN8-213ENST00000637156 A0A1B0GVX0 72 aa11.85□□□□□ -0.51
CLN8-213ENST00000637156 C20orf197Q8N268 126 aa11.85□□□□□ -0.51
CLN8-213ENST00000637156 CYSTM1Q9H1C7 97 aa11.85□□□□□ -0.51
CLN8-213ENST00000637156 IGHV6-1A0A0B4J1U7 121 aa11.84□□□□□ -0.51
CLN8-213ENST00000637156 RETNLBQ9BQ08 111 aa11.84□□□□□ -0.51
CLN8-213ENST00000637156 NOTCH2NLQ7Z3S9 236 aa11.83□□□□□ -0.52
CLN8-213ENST00000637156 OCR1Q9BZK8 76 aa11.79□□□□□ -0.52
CLN8-213ENST00000637156 RPS28P62857 69 aaKnown RBP11.78□□□□□ -0.52
CLN8-213ENST00000637156 HCG22E2RYF7 251 aa11.78□□□□□ -0.52
CLN8-213ENST00000637156 MMP24-AS1A0A0U1RRL7 71 aa11.77□□□□□ -0.53
CLN8-213ENST00000637156 NDUFC1O43677 76 aa11.77□□□□□ -0.53
CLN8-213ENST00000637156 C8orf17Q9NRJ1 99 aa11.77□□□□□ -0.53
CLN8-213ENST00000637156 WFDC13Q8IUB5 93 aa11.76□□□□□ -0.53
CLN8-213ENST00000637156 PCLOQ9Y6V0 5065 aa11.73□□□□□ -0.53
CLN8-213ENST00000637156 H7BZZ5 65 aa11.72□□□□□ -0.53
CLN8-213ENST00000637156 CASC2Q6XLA1 102 aa11.72□□□□□ -0.53
CLN8-213ENST00000637156 hDV103S1A0JD37 113 aa11.71□□□□□ -0.53
CLN8-213ENST00000637156 LINC00313P59037 77 aa11.71□□□□□ -0.53
CLN8-213ENST00000637156 J3QL48 77 aa11.7□□□□□ -0.54
CLN8-213ENST00000637156 TMEM254Q8TBM7 123 aa11.7□□□□□ -0.54
CLN8-213ENST00000637156 C8orf87E5RJ46 101 aa11.68□□□□□ -0.54
CLN8-213ENST00000637156 SNURFQ9Y675 71 aa11.66□□□□□ -0.54
CLN8-213ENST00000637156 FAM236DA0A1B0GTK5 79 aa11.65□□□□□ -0.54
CLN8-213ENST00000637156 FAM236CP0DP71 79 aa11.65□□□□□ -0.54
CLN8-213ENST00000637156 FP248Q71RG6 208 aaPredicted RBP11.64□□□□□ -0.55
CLN8-213ENST00000637156 A0A0U1RQV1 116 aa11.63□□□□□ -0.55
CLN8-213ENST00000637156 KRTAP16-1A8MUX0 517 aa11.62□□□□□ -0.55
CLN8-213ENST00000637156 ATP5EP56381 51 aaPredicted RBP11.62□□□□□ -0.55
CLN8-213ENST00000637156 MRPL34Q9BQ48 92 aaKnown RBP11.62□□□□□ -0.55
CLN8-213ENST00000637156 C9orf92A6NGG3 77 aa11.6□□□□□ -0.55
CLN8-213ENST00000637156 IGLV7-46A0A075B6I9 117 aa11.59□□□□□ -0.55
CLN8-213ENST00000637156 C5orf47Q569G3 176 aa11.59□□□□□ -0.55
CLN8-213ENST00000637156 PRR4Q16378 134 aa11.56□□□□□ -0.56
CLN8-213ENST00000637156 Q8N9P0 234 aaPredicted RBP11.54□□□□□ -0.56
CLN8-213ENST00000637156 SERP1Q9Y6X1 66 aa11.53□□□□□ -0.56
CLN8-213ENST00000637156 NDUFS5O43920 106 aa11.51□□□□□ -0.57
CLN8-213ENST00000637156 KRTAP13-3Q3SY46 172 aa11.5□□□□□ -0.57
CLN8-213ENST00000637156 HERC1Q15751 4861 aa11.49□□□□□ -0.57
CLN8-213ENST00000637156 ZCCHC13Q8WW36 166 aaKnown RBP11.49□□□□□ -0.57
CLN8-213ENST00000637156 TP53AIP1Q9HCN2 124 aa11.45□□□□□ -0.58
CLN8-213ENST00000637156 LPAP08519 4548 aa11.45□□□□□ -0.58
CLN8-213ENST00000637156 H3BPC8 53 aa11.44□□□□□ -0.58
CLN8-213ENST00000637156 MP68P56378 58 aa11.44□□□□□ -0.58
CLN8-213ENST00000637156 C20orf166-AS1Q96NR2 134 aa11.43□□□□□ -0.58
CLN8-213ENST00000637156 Q5W150 140 aa11.42□□□□□ -0.58
CLN8-213ENST00000637156 A8MUU9 505 aa11.41□□□□□ -0.58
CLN8-213ENST00000637156 TPRXLQ17RH7 258 aa11.4□□□□□ -0.59
CLN8-213ENST00000637156 XP32Q5T750 250 aa11.38□□□□□ -0.59
CLN8-213ENST00000637156 LRP2P98164 4655 aa11.35□□□□□ -0.59
CLN8-213ENST00000637156 Q75L30 129 aa11.34□□□□□ -0.59
CLN8-213ENST00000637156 TRAV22A0A0B4J277 110 aa11.34□□□□□ -0.59
CLN8-213ENST00000637156 H0Y9P7 68 aa11.32□□□□□ -0.6
CLN8-213ENST00000637156 SMIM26A0A096LP01 95 aa11.32□□□□□ -0.6
CLN8-213ENST00000637156 LINC00208Q96KT6 92 aa11.29□□□□□ -0.6
CLN8-213ENST00000637156 CYP4F30PQ9H0H9 118 aa11.27□□□□□ -0.6
CLN8-213ENST00000637156 RPL37P61927 97 aaKnown RBP11.27□□□□□ -0.61
CLN8-213ENST00000637156 HMCN2Q8NDA2 5059 aa11.25□□□□□ -0.61
CLN8-213ENST00000637156 SPANXA2-OT1Q8N9U9 137 aa11.25□□□□□ -0.61
CLN8-213ENST00000637156 C1orf64Q8NEQ6 169 aa11.23□□□□□ -0.61
CLN8-213ENST00000637156 ATP11AUNQ6ZP68 121 aa11.19□□□□□ -0.62
CLN8-213ENST00000637156 LOC101927531A0A1B0GV80 90 aa11.13□□□□□ -0.63
CLN8-213ENST00000637156 IGKV2-30P06310 120 aa11.13□□□□□ -0.63
CLN8-213ENST00000637156 C4orf26Q17RF5 130 aa11.12□□□□□ -0.63
CLN8-213ENST00000637156 SVIPQ8NHG7 77 aa11.12□□□□□ -0.63
CLN8-213ENST00000637156 PCOTHQ58A44 107 aa11.1□□□□□ -0.63
CLN8-213ENST00000637156 IGKV2D-30A0A075B6S6 120 aa11.1□□□□□ -0.63
CLN8-213ENST00000637156 SPINK7P58062 85 aa11.05□□□□□ -0.64
CLN8-213ENST00000637156 C7orf65Q6ZTY9 151 aa11.02□□□□□ -0.64
CLN8-213ENST00000637156 SEC61BP60468 96 aaKnown RBP10.99□□□□□ -0.65
CLN8-213ENST00000637156 Q1T7F1 81 aa10.98□□□□□ -0.65
CLN8-213ENST00000637156 MUC17Q685J3 4493 aa10.94□□□□□ -0.66
CLN8-213ENST00000637156 HRES1P13985 223 aa10.94□□□□□ -0.66
CLN8-213ENST00000637156 MPLKIPQ8TAP9 179 aa10.93□□□□□ -0.66
CLN8-213ENST00000637156 V9GYY9 64 aa10.93□□□□□ -0.66
CLN8-213ENST00000637156 KRTAP4-1Q9BYQ7 146 aa10.87□□□□□ -0.67
CLN8-213ENST00000637156 MUC2Q02817 5179 aa10.85□□□□□ -0.67
CLN8-213ENST00000637156 COA5Q86WW8 74 aa10.85□□□□□ -0.67
CLN8-213ENST00000637156 UBR4Q5T4S7 5183 aa10.78□□□□□ -0.68
CLN8-213ENST00000637156 KRTAP3-1Q9BYR8 98 aa10.76□□□□□ -0.69
CLN8-213ENST00000637156 PRO0628Q9UI54 55 aa10.74□□□□□ -0.69
CLN8-213ENST00000637156 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
CLN8-213ENST00000637156 COX6B2Q6YFQ2 88 aa10.71□□□□□ -0.69
CLN8-213ENST00000637156 ACYP2P14621 99 aa10.7□□□□□ -0.7
CLN8-213ENST00000637156 PSPHP1O15172 72 aa10.66□□□□□ -0.7
CLN8-213ENST00000637156 BRK1Q8WUW1 75 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms