RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 LRP1BQ9NZR2 4599 aa7.18□□□□□ -1.26
CLN8-212ENST00000637083 FP248Q71RG6 208 aaPredicted RBP7.17□□□□□ -1.26
CLN8-212ENST00000637083 MRPL34Q9BQ48 92 aaKnown RBP7.17□□□□□ -1.26
CLN8-212ENST00000637083 FAM229BQ4G0N7 80 aa7.15□□□□□ -1.26
CLN8-212ENST00000637083 NDUFS5O43920 106 aa7.15□□□□□ -1.27
CLN8-212ENST00000637083 KRTAP10-1P60331 282 aa7.14□□□□□ -1.27
CLN8-212ENST00000637083 SACSQ9NZJ4 4579 aa7.13□□□□□ -1.27
CLN8-212ENST00000637083 C8orf87E5RJ46 101 aa7.13□□□□□ -1.27
CLN8-212ENST00000637083 SPINK6Q6UWN8 80 aa7.12□□□□□ -1.27
CLN8-212ENST00000637083 PRR4Q16378 134 aa7.1□□□□□ -1.27
CLN8-212ENST00000637083 RYR3Q15413 4870 aa7.09□□□□□ -1.27
CLN8-212ENST00000637083 VPS13BQ7Z7G8 4022 aa7.09□□□□□ -1.28
CLN8-212ENST00000637083 MPLKIPQ8TAP9 179 aa7.08□□□□□ -1.28
CLN8-212ENST00000637083 IGLV7-46A0A075B6I9 117 aa7.08□□□□□ -1.28
CLN8-212ENST00000637083 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
CLN8-212ENST00000637083 Q1T7F1 81 aa7.06□□□□□ -1.28
CLN8-212ENST00000637083 V9GYY9 64 aa7.06□□□□□ -1.28
CLN8-212ENST00000637083 A0A087X002 238 aa7.06□□□□□ -1.28
CLN8-212ENST00000637083 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
CLN8-212ENST00000637083 LOC101927531A0A1B0GV80 90 aa7.05□□□□□ -1.28
CLN8-212ENST00000637083 NOTCH2NLQ7Z3S9 236 aa7.05□□□□□ -1.28
CLN8-212ENST00000637083 PKHD1P08F94 4074 aa7.04□□□□□ -1.28
CLN8-212ENST00000637083 LINC00313P59037 77 aa7.03□□□□□ -1.28
CLN8-212ENST00000637083 LINC00336Q6ZUF6 198 aa7.03□□□□□ -1.28
CLN8-212ENST00000637083 C4orf48Q5BLP8 95 aa7.03□□□□□ -1.28
CLN8-212ENST00000637083 PCOTHQ58A44 107 aa7.02□□□□□ -1.29
CLN8-212ENST00000637083 KRTAP1-4P0C5Y4 121 aa7.01□□□□□ -1.29
CLN8-212ENST00000637083 C1orf195Q5TG92 126 aa7.01□□□□□ -1.29
CLN8-212ENST00000637083 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
CLN8-212ENST00000637083 DYNC1H1Q14204 4646 aaKnown RBP6.99□□□□□ -1.29
CLN8-212ENST00000637083 FAM229AH3BQW9 127 aa6.98□□□□□ -1.29
CLN8-212ENST00000637083 SPINK1P00995 79 aa6.98□□□□□ -1.29
CLN8-212ENST00000637083 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
CLN8-212ENST00000637083 PRO0628Q9UI54 55 aa6.98□□□□□ -1.29
CLN8-212ENST00000637083 COA5Q86WW8 74 aa6.96□□□□□ -1.29
CLN8-212ENST00000637083 Q8N9P0 234 aaPredicted RBP6.96□□□□□ -1.29
CLN8-212ENST00000637083 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.3
CLN8-212ENST00000637083 Q5W150 140 aa6.94□□□□□ -1.3
CLN8-212ENST00000637083 RYR2Q92736 4967 aa6.94□□□□□ -1.3
CLN8-212ENST00000637083 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
CLN8-212ENST00000637083 SPAG11AQ6PDA7 123 aa6.93□□□□□ -1.3
CLN8-212ENST00000637083 BRK1Q8WUW1 75 aa6.93□□□□□ -1.3
CLN8-212ENST00000637083 FAT1Q14517 4588 aa6.89□□□□□ -1.31
CLN8-212ENST00000637083 PSPHP1O15172 72 aa6.89□□□□□ -1.31
CLN8-212ENST00000637083 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
CLN8-212ENST00000637083 APOBP04114 4563 aaKnown RBP6.88□□□□□ -1.31
CLN8-212ENST00000637083 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
CLN8-212ENST00000637083 A0A1B0GVY2 172 aa6.87□□□□□ -1.31
CLN8-212ENST00000637083 ACYP2P14621 99 aa6.87□□□□□ -1.31
CLN8-212ENST00000637083 IGKV2-30P06310 120 aa6.86□□□□□ -1.31
CLN8-212ENST00000637083 HRES1P13985 223 aa6.86□□□□□ -1.31
CLN8-212ENST00000637083 A8MUN3 132 aa6.86□□□□□ -1.31
CLN8-212ENST00000637083 PRR26Q8N8Z3 221 aa6.85□□□□□ -1.31
CLN8-212ENST00000637083 SMR3BP02814 79 aaPredicted RBP6.84□□□□□ -1.31
CLN8-212ENST00000637083 PRR15LQ9BU68 103 aa6.84□□□□□ -1.31
CLN8-212ENST00000637083 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
CLN8-212ENST00000637083 Q5VV11 94 aa6.82□□□□□ -1.32
CLN8-212ENST00000637083 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
CLN8-212ENST00000637083 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
CLN8-212ENST00000637083 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
CLN8-212ENST00000637083 CHKB-CPT1BH3BT56 60 aa6.79□□□□□ -1.32
CLN8-212ENST00000637083 Q75L30 129 aa6.79□□□□□ -1.32
CLN8-212ENST00000637083 BIRC6Q9NR09 4857 aa6.79□□□□□ -1.32
CLN8-212ENST00000637083 IGKV2D-30A0A075B6S6 120 aa6.76□□□□□ -1.33
CLN8-212ENST00000637083 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
CLN8-212ENST00000637083 PKHD1L1Q86WI1 4243 aa6.75□□□□□ -1.33
CLN8-212ENST00000637083 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
CLN8-212ENST00000637083 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
CLN8-212ENST00000637083 A6NED7 52 aa6.72□□□□□ -1.33
CLN8-212ENST00000637083 C20orf166-AS1Q96NR2 134 aa6.67□□□□□ -1.34
CLN8-212ENST00000637083 A8MUU9 505 aa6.67□□□□□ -1.34
CLN8-212ENST00000637083 CDC42SE1Q9NRR8 79 aa6.65□□□□□ -1.35
CLN8-212ENST00000637083 HSPG2P98160 4391 aa6.64□□□□□ -1.35
CLN8-212ENST00000637083 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
CLN8-212ENST00000637083 ATP11AUNQ6ZP68 121 aa6.63□□□□□ -1.35
CLN8-212ENST00000637083 A0A1B0GU69 56 aa6.62□□□□□ -1.35
CLN8-212ENST00000637083 LCA10Q71F78 164 aa6.6□□□□□ -1.35
CLN8-212ENST00000637083 LRP1Q07954 4544 aaKnown RBP6.6□□□□□ -1.35
CLN8-212ENST00000637083 RYR1P21817 5038 aa6.6□□□□□ -1.35
CLN8-212ENST00000637083 SPTSSBQ8NFR3 76 aa6.59□□□□□ -1.35
CLN8-212ENST00000637083 TNXBP22105 4242 aa6.59□□□□□ -1.35
CLN8-212ENST00000637083 SPINK7P58062 85 aa6.57□□□□□ -1.36
CLN8-212ENST00000637083 PMAIP1Q13794 54 aa6.57□□□□□ -1.36
CLN8-212ENST00000637083 Q5VSD8 79 aa6.55□□□□□ -1.36
CLN8-212ENST00000637083 HERC2O95714 4834 aa6.55□□□□□ -1.36
CLN8-212ENST00000637083 A8MU10 97 aa6.55□□□□□ -1.36
CLN8-212ENST00000637083 KRTAP10-8P60410 259 aa6.55□□□□□ -1.36
CLN8-212ENST00000637083 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
CLN8-212ENST00000637083 Q8N1X5 172 aa6.54□□□□□ -1.36
CLN8-212ENST00000637083 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
CLN8-212ENST00000637083 SEC61GP60059 68 aa6.51□□□□□ -1.37
CLN8-212ENST00000637083 UQCR11O14957 56 aa6.5□□□□□ -1.37
CLN8-212ENST00000637083 KIAA1109Q2LD37 5005 aa6.49□□□□□ -1.37
CLN8-212ENST00000637083 SPATA8Q6RVD6 105 aa6.46□□□□□ -1.38
CLN8-212ENST00000637083 PCLOQ9Y6V0 5065 aa6.45□□□□□ -1.38
CLN8-212ENST00000637083 DMBT1Q9UGM3 2413 aaPredicted RBP6.44□□□□□ -1.38
CLN8-212ENST00000637083 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
CLN8-212ENST00000637083 A6NN06 94 aa6.43□□□□□ -1.38
CLN8-212ENST00000637083 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
CLN8-212ENST00000637083 MYCBP2O75592 4640 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms