RNA–Protein interactions for RNA: ENST00000636905.1

SYNGAP1-218, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-218ENST00000636905 SPINK1P00995 79 aa3.2□□□□□ -1.9
SYNGAP1-218ENST00000636905 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
SYNGAP1-218ENST00000636905 C1orf195Q5TG92 126 aa3.2□□□□□ -1.9
SYNGAP1-218ENST00000636905 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
SYNGAP1-218ENST00000636905 MRPL34Q9BQ48 92 aaKnown RBP3.2□□□□□ -1.9
SYNGAP1-218ENST00000636905 SMR3BP02814 79 aaPredicted RBP3.19□□□□□ -1.9
SYNGAP1-218ENST00000636905 SERP1Q9Y6X1 66 aa3.19□□□□□ -1.9
SYNGAP1-218ENST00000636905 DNAH5Q8TE73 4624 aa3.18□□□□□ -1.9
SYNGAP1-218ENST00000636905 TRAV22A0A0B4J277 110 aa3.18□□□□□ -1.9
SYNGAP1-218ENST00000636905 KRTAP10-4P60372 401 aaPredicted RBP3.18□□□□□ -1.9
SYNGAP1-218ENST00000636905 LINC00208Q96KT6 92 aa3.18□□□□□ -1.9
SYNGAP1-218ENST00000636905 FAT2Q9NYQ8 4349 aa3.17□□□□□ -1.9
SYNGAP1-218ENST00000636905 LINC00313P59037 77 aa3.17□□□□□ -1.9
SYNGAP1-218ENST00000636905 NOTCH2NLQ7Z3S9 236 aa3.17□□□□□ -1.9
SYNGAP1-218ENST00000636905 LINC00304Q8N9R0 145 aa3.17□□□□□ -1.9
SYNGAP1-218ENST00000636905 NDUFS5O43920 106 aa3.16□□□□□ -1.9
SYNGAP1-218ENST00000636905 PRR26Q8N8Z3 221 aa3.16□□□□□ -1.9
SYNGAP1-218ENST00000636905 C1orf64Q8NEQ6 169 aa3.16□□□□□ -1.9
SYNGAP1-218ENST00000636905 FAM229AH3BQW9 127 aa3.15□□□□□ -1.91
SYNGAP1-218ENST00000636905 SPANXA2-OT1Q8N9U9 137 aa3.15□□□□□ -1.91
SYNGAP1-218ENST00000636905 CYP4F30PQ9H0H9 118 aa3.15□□□□□ -1.91
SYNGAP1-218ENST00000636905 Q8N9P0 234 aaPredicted RBP3.14□□□□□ -1.91
SYNGAP1-218ENST00000636905 LOC101927531A0A1B0GV80 90 aa3.13□□□□□ -1.91
SYNGAP1-218ENST00000636905 OXTP01178 125 aa3.13□□□□□ -1.91
SYNGAP1-218ENST00000636905 SACSQ9NZJ4 4579 aa3.13□□□□□ -1.91
SYNGAP1-218ENST00000636905 HYDINQ4G0P3 5121 aa3.12□□□□□ -1.91
SYNGAP1-218ENST00000636905 LRP1BQ9NZR2 4599 aa3.12□□□□□ -1.91
SYNGAP1-218ENST00000636905 SMIM26A0A096LP01 95 aa3.12□□□□□ -1.91
SYNGAP1-218ENST00000636905 KRTAP16-1A8MUX0 517 aa3.12□□□□□ -1.91
SYNGAP1-218ENST00000636905 KRTAP13-3Q3SY46 172 aa3.12□□□□□ -1.91
SYNGAP1-218ENST00000636905 IGLV7-46A0A075B6I9 117 aa3.11□□□□□ -1.91
SYNGAP1-218ENST00000636905 Q5W150 140 aa3.11□□□□□ -1.91
SYNGAP1-218ENST00000636905 Q5VSD8 79 aa3.1□□□□□ -1.91
SYNGAP1-218ENST00000636905 KRTAP10-8P60410 259 aa3.09□□□□□ -1.91
SYNGAP1-218ENST00000636905 VPS13BQ7Z7G8 4022 aa3.09□□□□□ -1.92
SYNGAP1-218ENST00000636905 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
SYNGAP1-218ENST00000636905 DYNC1H1Q14204 4646 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-218ENST00000636905 IGKV2-30P06310 120 aa3.07□□□□□ -1.92
SYNGAP1-218ENST00000636905 PRR4Q16378 134 aa3.07□□□□□ -1.92
SYNGAP1-218ENST00000636905 PKHD1P08F94 4074 aa3.06□□□□□ -1.92
SYNGAP1-218ENST00000636905 FP248Q71RG6 208 aaPredicted RBP3.06□□□□□ -1.92
SYNGAP1-218ENST00000636905 A8MUU9 505 aa3.05□□□□□ -1.92
SYNGAP1-218ENST00000636905 Q8N1X5 172 aa3.05□□□□□ -1.92
SYNGAP1-218ENST00000636905 C20orf166-AS1Q96NR2 134 aa3.05□□□□□ -1.92
SYNGAP1-218ENST00000636905 FLG2Q5D862 2391 aaPredicted RBP3.04□□□□□ -1.92
SYNGAP1-218ENST00000636905 Q1T7F1 81 aa3.04□□□□□ -1.92
SYNGAP1-218ENST00000636905 COA5Q86WW8 74 aa3.04□□□□□ -1.92
SYNGAP1-218ENST00000636905 RETNLBQ9BQ08 111 aa3.04□□□□□ -1.92
SYNGAP1-218ENST00000636905 V9GYY9 64 aa3.04□□□□□ -1.92
SYNGAP1-218ENST00000636905 APOBP04114 4563 aaKnown RBP3.03□□□□□ -1.92
SYNGAP1-218ENST00000636905 RYR2Q92736 4967 aa3.03□□□□□ -1.92
SYNGAP1-218ENST00000636905 HRES1P13985 223 aa3.03□□□□□ -1.92
SYNGAP1-218ENST00000636905 ACYP2P14621 99 aa3.03□□□□□ -1.92
SYNGAP1-218ENST00000636905 C4orf26Q17RF5 130 aa3.03□□□□□ -1.92
SYNGAP1-218ENST00000636905 IGKV2D-30A0A075B6S6 120 aa3.02□□□□□ -1.93
SYNGAP1-218ENST00000636905 C9orf92A6NGG3 77 aa3.02□□□□□ -1.93
SYNGAP1-218ENST00000636905 C7orf65Q6ZTY9 151 aa3.02□□□□□ -1.93
SYNGAP1-218ENST00000636905 DMAC1Q96GE9 116 aa3.02□□□□□ -1.93
SYNGAP1-218ENST00000636905 PKHD1L1Q86WI1 4243 aa3.01□□□□□ -1.93
SYNGAP1-218ENST00000636905 Q75L30 129 aa3.01□□□□□ -1.93
SYNGAP1-218ENST00000636905 MPLKIPQ8TAP9 179 aa3.01□□□□□ -1.93
SYNGAP1-218ENST00000636905 KRTAP17-1Q9BYP8 105 aa3□□□□□ -1.93
SYNGAP1-218ENST00000636905 KMT2CQ8NEZ4 4911 aaKnown RBP2.99□□□□□ -1.93
SYNGAP1-218ENST00000636905 MT1HL1P0DM35 61 aa2.99□□□□□ -1.93
SYNGAP1-218ENST00000636905 A8MUN3 132 aa2.98□□□□□ -1.93
SYNGAP1-218ENST00000636905 FAT1Q14517 4588 aa2.97□□□□□ -1.93
SYNGAP1-218ENST00000636905 LINC01558Q9Y6Z2 57 aa2.97□□□□□ -1.93
SYNGAP1-218ENST00000636905 DMBT1Q9UGM3 2413 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-218ENST00000636905 CHKB-CPT1BH3BT56 60 aa2.96□□□□□ -1.94
SYNGAP1-218ENST00000636905 ATP11AUNQ6ZP68 121 aa2.96□□□□□ -1.94
SYNGAP1-218ENST00000636905 SPINK7P58062 85 aa2.95□□□□□ -1.94
SYNGAP1-218ENST00000636905 RPL37P61927 97 aaKnown RBP2.95□□□□□ -1.94
SYNGAP1-218ENST00000636905 PSPHP1O15172 72 aa2.94□□□□□ -1.94
SYNGAP1-218ENST00000636905 XP32Q5T750 250 aa2.94□□□□□ -1.94
SYNGAP1-218ENST00000636905 HSPG2P98160 4391 aa2.94□□□□□ -1.94
SYNGAP1-218ENST00000636905 Q5VV11 94 aa2.93□□□□□ -1.94
SYNGAP1-218ENST00000636905 TPRXLQ17RH7 258 aa2.92□□□□□ -1.94
SYNGAP1-218ENST00000636905 SPTSSBQ8NFR3 76 aa2.92□□□□□ -1.94
SYNGAP1-218ENST00000636905 PRR15LQ9BU68 103 aa2.92□□□□□ -1.94
SYNGAP1-218ENST00000636905 COX6B2Q6YFQ2 88 aa2.91□□□□□ -1.94
SYNGAP1-218ENST00000636905 KRTAP4-5Q9BYR2 181 aa2.91□□□□□ -1.94
SYNGAP1-218ENST00000636905 BRK1Q8WUW1 75 aa2.9□□□□□ -1.95
SYNGAP1-218ENST00000636905 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
SYNGAP1-218ENST00000636905 RYR3Q15413 4870 aa2.9□□□□□ -1.95
SYNGAP1-218ENST00000636905 RYR1P21817 5038 aa2.89□□□□□ -1.95
SYNGAP1-218ENST00000636905 TNXBP22105 4242 aa2.89□□□□□ -1.95
SYNGAP1-218ENST00000636905 SVIPQ8NHG7 77 aa2.89□□□□□ -1.95
SYNGAP1-218ENST00000636905 KRTAP3-1Q9BYR8 98 aa2.89□□□□□ -1.95
SYNGAP1-218ENST00000636905 LRP1Q07954 4544 aaKnown RBP2.89□□□□□ -1.95
SYNGAP1-218ENST00000636905 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
SYNGAP1-218ENST00000636905 A0A1B0GU69 56 aa2.87□□□□□ -1.95
SYNGAP1-218ENST00000636905 A6NED7 52 aa2.86□□□□□ -1.95
SYNGAP1-218ENST00000636905 J3QL48 77 aa2.86□□□□□ -1.95
SYNGAP1-218ENST00000636905 SEC61GP60059 68 aa2.85□□□□□ -1.95
SYNGAP1-218ENST00000636905 CDC42SE1Q9NRR8 79 aa2.85□□□□□ -1.95
SYNGAP1-218ENST00000636905 KIAA1109Q2LD37 5005 aa2.84□□□□□ -1.96
SYNGAP1-218ENST00000636905 SEC61BP60468 96 aaKnown RBP2.83□□□□□ -1.96
SYNGAP1-218ENST00000636905 UQCR11O14957 56 aa2.82□□□□□ -1.96
SYNGAP1-218ENST00000636905 H1FX-AS1Q4G0G2 97 aa2.82□□□□□ -1.96
SYNGAP1-218ENST00000636905 LCA10Q71F78 164 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms