RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 ZNF861PO60384 105 aa12.79□□□□□ -0.36
CLN5-215ENST00000636767 RTL8CO15255 209 aa12.78□□□□□ -0.36
CLN5-215ENST00000636767 A6NED7 52 aa12.78□□□□□ -0.36
CLN5-215ENST00000636767 HRES1P13985 223 aa12.78□□□□□ -0.36
CLN5-215ENST00000636767 SPAG11AQ6PDA7 123 aa12.78□□□□□ -0.36
CLN5-215ENST00000636767 FRAS1Q86XX4 4008 aa12.77□□□□□ -0.36
CLN5-215ENST00000636767 VPS13DQ5THJ4 4388 aa12.77□□□□□ -0.36
CLN5-215ENST00000636767 PLAC8Q9NZF1 115 aa12.77□□□□□ -0.36
CLN5-215ENST00000636767 LINC01558Q9Y6Z2 57 aa12.77□□□□□ -0.36
CLN5-215ENST00000636767 PRKDCP78527 4128 aaKnown RBP12.77□□□□□ -0.37
CLN5-215ENST00000636767 SEC61GP60059 68 aa12.76□□□□□ -0.37
CLN5-215ENST00000636767 HECTD4Q9Y4D8 3996 aa12.75□□□□□ -0.37
CLN5-215ENST00000636767 STARD9Q9P2P6 4700 aa12.72□□□□□ -0.37
CLN5-215ENST00000636767 SPTSSBQ8NFR3 76 aa12.71□□□□□ -0.38
CLN5-215ENST00000636767 SPINK6Q6UWN8 80 aa12.7□□□□□ -0.38
CLN5-215ENST00000636767 Q5W150 140 aa12.69□□□□□ -0.38
CLN5-215ENST00000636767 KRTAP13-3Q3SY46 172 aa12.69□□□□□ -0.38
CLN5-215ENST00000636767 ATP11AUNQ6ZP68 121 aa12.69□□□□□ -0.38
CLN5-215ENST00000636767 CDC42SE1Q9NRR8 79 aa12.67□□□□□ -0.38
CLN5-215ENST00000636767 DNAH17Q9UFH2 4485 aa12.67□□□□□ -0.38
CLN5-215ENST00000636767 MEGF8Q7Z7M0 2845 aa12.63□□□□□ -0.39
CLN5-215ENST00000636767 CIRBP-AS1Q8TBR5 109 aa12.62□□□□□ -0.39
CLN5-215ENST00000636767 DNAH2Q9P225 4427 aa12.61□□□□□ -0.39
CLN5-215ENST00000636767 IGLV7-43P04211 117 aa12.61□□□□□ -0.39
CLN5-215ENST00000636767 SPINK7P58062 85 aa12.59□□□□□ -0.39
CLN5-215ENST00000636767 KTN1-AS1Q86SY8 53 aa12.58□□□□□ -0.4
CLN5-215ENST00000636767 A6NN06 94 aa12.57□□□□□ -0.4
CLN5-215ENST00000636767 KMT2AQ03164 3969 aa12.57□□□□□ -0.4
CLN5-215ENST00000636767 PRR26Q8N8Z3 221 aa12.57□□□□□ -0.4
CLN5-215ENST00000636767 FBN3Q75N90 2809 aa12.55□□□□□ -0.4
CLN5-215ENST00000636767 C8orf87E5RJ46 101 aa12.53□□□□□ -0.4
CLN5-215ENST00000636767 SSBP3-AS1Q7Z2R9 100 aa12.5□□□□□ -0.41
CLN5-215ENST00000636767 ALMS1Q8TCU4 4167 aa12.49□□□□□ -0.41
CLN5-215ENST00000636767 ACYP2P14621 99 aa12.49□□□□□ -0.41
CLN5-215ENST00000636767 C1orf134Q5TEV5 83 aa12.45□□□□□ -0.42
CLN5-215ENST00000636767 DMAC1Q96GE9 116 aa12.45□□□□□ -0.42
CLN5-215ENST00000636767 LINC00313P59037 77 aa12.43□□□□□ -0.42
CLN5-215ENST00000636767 FAM229AH3BQW9 127 aa12.41□□□□□ -0.42
CLN5-215ENST00000636767 RETNLBQ9BQ08 111 aa12.4□□□□□ -0.43
CLN5-215ENST00000636767 DNAH11Q96DT5 4516 aa12.39□□□□□ -0.43
CLN5-215ENST00000636767 TGP01266 2768 aa12.37□□□□□ -0.43
CLN5-215ENST00000636767 IGKV2-30P06310 120 aa12.36□□□□□ -0.43
CLN5-215ENST00000636767 KRTAP13-2Q52LG2 175 aa12.36□□□□□ -0.43
CLN5-215ENST00000636767 DNAH6Q9C0G6 4158 aa12.36□□□□□ -0.43
CLN5-215ENST00000636767 RBM12B-AS1Q9P1G2 102 aa12.35□□□□□ -0.43
CLN5-215ENST00000636767 C7orf65Q6ZTY9 151 aa12.34□□□□□ -0.43
CLN5-215ENST00000636767 DNAH5Q8TE73 4624 aa12.31□□□□□ -0.44
CLN5-215ENST00000636767 KRTAP16-1A8MUX0 517 aa12.31□□□□□ -0.44
CLN5-215ENST00000636767 KRTAP10-2P60368 255 aa12.3□□□□□ -0.44
CLN5-215ENST00000636767 LY6G6CO95867 125 aa12.26□□□□□ -0.45
CLN5-215ENST00000636767 A0A1B0GU69 56 aa12.24□□□□□ -0.45
CLN5-215ENST00000636767 IGKV2D-30A0A075B6S6 120 aa12.18□□□□□ -0.46
CLN5-215ENST00000636767 KRTAP1-4P0C5Y4 121 aa12.17□□□□□ -0.46
CLN5-215ENST00000636767 Q6ZSA8 131 aa12.17□□□□□ -0.46
CLN5-215ENST00000636767 LRP1BQ9NZR2 4599 aa12.17□□□□□ -0.46
CLN5-215ENST00000636767 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
CLN5-215ENST00000636767 SPATA8Q6RVD6 105 aa12.13□□□□□ -0.47
CLN5-215ENST00000636767 HYDINQ4G0P3 5121 aa12.12□□□□□ -0.47
CLN5-215ENST00000636767 PKD1P98161 4303 aa12.07□□□□□ -0.48
CLN5-215ENST00000636767 UQCR11O14957 56 aa12.05□□□□□ -0.48
CLN5-215ENST00000636767 MIR22HGQ0VDD5 57 aa12.05□□□□□ -0.48
CLN5-215ENST00000636767 PRAC1Q96KF2 57 aa12.02□□□□□ -0.49
CLN5-215ENST00000636767 C4orf48Q5BLP8 95 aa12□□□□□ -0.49
CLN5-215ENST00000636767 VPS13BQ7Z7G8 4022 aa12□□□□□ -0.49
CLN5-215ENST00000636767 TYMSOSQ8TAI1 123 aa11.99□□□□□ -0.49
CLN5-215ENST00000636767 FAT2Q9NYQ8 4349 aa11.99□□□□□ -0.49
CLN5-215ENST00000636767 PLA2G1BP04054 148 aaKnown RBP11.99□□□□□ -0.49
CLN5-215ENST00000636767 ADM2Q7Z4H4 148 aa11.99□□□□□ -0.49
CLN5-215ENST00000636767 SPINK1P00995 79 aa11.97□□□□□ -0.49
CLN5-215ENST00000636767 KRTAP21-3Q3LHN1 58 aa11.93□□□□□ -0.5
CLN5-215ENST00000636767 Q8N1X5 172 aa11.91□□□□□ -0.5
CLN5-215ENST00000636767 LINC00304Q8N9R0 145 aa11.82□□□□□ -0.52
CLN5-215ENST00000636767 SACSQ9NZJ4 4579 aa11.8□□□□□ -0.52
CLN5-215ENST00000636767 RPS29P62273 56 aaKnown RBP11.79□□□□□ -0.52
CLN5-215ENST00000636767 C9orf92A6NGG3 77 aa11.68□□□□□ -0.54
CLN5-215ENST00000636767 LINC01554Q52M75 96 aa11.68□□□□□ -0.54
CLN5-215ENST00000636767 PKHD1P08F94 4074 aa11.67□□□□□ -0.54
CLN5-215ENST00000636767 A8MUU9 505 aa11.67□□□□□ -0.54
CLN5-215ENST00000636767 C20orf166-AS1Q96NR2 134 aa11.67□□□□□ -0.54
CLN5-215ENST00000636767 H0YAA0 97 aa11.64□□□□□ -0.55
CLN5-215ENST00000636767 KRTAP3-1Q9BYR8 98 aa11.64□□□□□ -0.55
CLN5-215ENST00000636767 CSAG1Q6PB30 78 aa11.62□□□□□ -0.55
CLN5-215ENST00000636767 SMR3BP02814 79 aaPredicted RBP11.57□□□□□ -0.56
CLN5-215ENST00000636767 PKHD1L1Q86WI1 4243 aa11.56□□□□□ -0.56
CLN5-215ENST00000636767 KMT2CQ8NEZ4 4911 aaKnown RBP11.54□□□□□ -0.56
CLN5-215ENST00000636767 A0A1B0GU33 70 aa11.52□□□□□ -0.57
CLN5-215ENST00000636767 RYR2Q92736 4967 aa11.49□□□□□ -0.57
CLN5-215ENST00000636767 DYNC1H1Q14204 4646 aaKnown RBP11.49□□□□□ -0.57
CLN5-215ENST00000636767 H1FX-AS1Q4G0G2 97 aa11.48□□□□□ -0.57
CLN5-215ENST00000636767 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.58
CLN5-215ENST00000636767 KRTAP10-4P60372 401 aaPredicted RBP11.46□□□□□ -0.58
CLN5-215ENST00000636767 FAT1Q14517 4588 aa11.43□□□□□ -0.58
CLN5-215ENST00000636767 COX6B2Q6YFQ2 88 aa11.38□□□□□ -0.59
CLN5-215ENST00000636767 A0A1B0GVY2 172 aa11.32□□□□□ -0.6
CLN5-215ENST00000636767 KRTAP25-1Q3LHN0 102 aa11.29□□□□□ -0.6
CLN5-215ENST00000636767 RYR3Q15413 4870 aa11.25□□□□□ -0.61
CLN5-215ENST00000636767 FLG2Q5D862 2391 aaPredicted RBP11.25□□□□□ -0.61
CLN5-215ENST00000636767 K7ERS5 55 aa11.17□□□□□ -0.62
CLN5-215ENST00000636767 FAT3Q8TDW7 4589 aa11.14□□□□□ -0.63
CLN5-215ENST00000636767 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms