RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 A0A1B0GVX0 72 aa9.07□□□□□ -0.96
PNKP-225ENST00000636214 C9JAW5 83 aa9.07□□□□□ -0.96
PNKP-225ENST00000636214 BAALC-AS2P0C853 105 aa9.06□□□□□ -0.96
PNKP-225ENST00000636214 J3KT08 172 aa9.05□□□□□ -0.96
PNKP-225ENST00000636214 NDUFB1O75438 58 aa9.01□□□□□ -0.97
PNKP-225ENST00000636214 TSTD3H0UI37 97 aa9□□□□□ -0.97
PNKP-225ENST00000636214 M0R143 59 aa9□□□□□ -0.97
PNKP-225ENST00000636214 ATXN8Q156A1 80 aa9□□□□□ -0.97
PNKP-225ENST00000636214 MTURNQ8N3F0 131 aa9□□□□□ -0.97
PNKP-225ENST00000636214 HRES1P13985 223 aa8.99□□□□□ -0.97
PNKP-225ENST00000636214 JMJD7-PLA2G4BH0Y9G9 81 aa8.98□□□□□ -0.97
PNKP-225ENST00000636214 Q6ZQT0 140 aa8.97□□□□□ -0.97
PNKP-225ENST00000636214 KRTAP9-8Q9BYQ0 159 aa8.97□□□□□ -0.97
PNKP-225ENST00000636214 LYRM7Q5U5X0 104 aa8.96□□□□□ -0.98
PNKP-225ENST00000636214 MPLKIPQ8TAP9 179 aa8.96□□□□□ -0.98
PNKP-225ENST00000636214 ZCCHC13Q8WW36 166 aaKnown RBP8.96□□□□□ -0.98
PNKP-225ENST00000636214 A0A1B0GW54 56 aa8.93□□□□□ -0.98
PNKP-225ENST00000636214 PDE6GP18545 87 aa8.93□□□□□ -0.98
PNKP-225ENST00000636214 NAA38Q9BRA0 125 aaKnown RBP8.93□□□□□ -0.98
PNKP-225ENST00000636214 LOC110117498A0A087WWA1 95 aa8.9□□□□□ -0.98
PNKP-225ENST00000636214 A8MWP4 228 aa8.89□□□□□ -0.99
PNKP-225ENST00000636214 SPINK7P58062 85 aa8.89□□□□□ -0.99
PNKP-225ENST00000636214 C8orf17Q9NRJ1 99 aa8.89□□□□□ -0.99
PNKP-225ENST00000636214 MT2AP02795 61 aa8.87□□□□□ -0.99
PNKP-225ENST00000636214 Q8N9P0 234 aaPredicted RBP8.87□□□□□ -0.99
PNKP-225ENST00000636214 C14orf132Q9NPU4 83 aa8.87□□□□□ -0.99
PNKP-225ENST00000636214 USH2AO75445 5202 aa8.85□□□□□ -0.99
PNKP-225ENST00000636214 KRTAP10-10P60014 251 aa8.84□□□□□ -0.99
PNKP-225ENST00000636214 NREPQ16612 68 aa8.84□□□□□ -0.99
PNKP-225ENST00000636214 IGKV3D-7A0A0C4DH55 119 aa8.83□□□□□ -1
PNKP-225ENST00000636214 Q6ZVQ6 151 aa8.83□□□□□ -1
PNKP-225ENST00000636214 SSPOA2VEC9 5147 aa8.81□□□□□ -1
PNKP-225ENST00000636214 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
PNKP-225ENST00000636214 MT1FP04733 61 aa8.8□□□□□ -1
PNKP-225ENST00000636214 BATFQ16520 125 aa8.8□□□□□ -1
PNKP-225ENST00000636214 WFDC13Q8IUB5 93 aa8.8□□□□□ -1
PNKP-225ENST00000636214 PRR15Q8IV56 129 aa8.79□□□□□ -1
PNKP-225ENST00000636214 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
PNKP-225ENST00000636214 MRPL34Q9BQ48 92 aaKnown RBP8.74□□□□□ -1.01
PNKP-225ENST00000636214 NDUFS5O43920 106 aa8.73□□□□□ -1.01
PNKP-225ENST00000636214 MMP24-AS1A0A0U1RRL7 71 aa8.71□□□□□ -1.02
PNKP-225ENST00000636214 hDV103S1A0JD37 113 aa8.71□□□□□ -1.02
PNKP-225ENST00000636214 H3BT86 120 aa8.71□□□□□ -1.02
PNKP-225ENST00000636214 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.7□□□□□ -1.02
PNKP-225ENST00000636214 KRTAP9-3Q9BYQ3 159 aa8.7□□□□□ -1.02
PNKP-225ENST00000636214 K7EQZ3 153 aa8.68□□□□□ -1.02
PNKP-225ENST00000636214 LCE2BO14633 110 aa8.68□□□□□ -1.02
PNKP-225ENST00000636214 BPY2O14599 106 aa8.67□□□□□ -1.02
PNKP-225ENST00000636214 C9orf118A6NHY6 69 aa8.66□□□□□ -1.02
PNKP-225ENST00000636214 A0A1W2PPM0 123 aa8.64□□□□□ -1.03
PNKP-225ENST00000636214 KRTAP9-7A8MTY7 169 aa8.64□□□□□ -1.03
PNKP-225ENST00000636214 COL5A1-AS1Q5SY13 56 aa8.63□□□□□ -1.03
PNKP-225ENST00000636214 LINC00846Q9NV44 126 aa8.63□□□□□ -1.03
PNKP-225ENST00000636214 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
PNKP-225ENST00000636214 FCGBPQ9Y6R7 5405 aaPredicted RBP8.62□□□□□ -1.03
PNKP-225ENST00000636214 IGKV2D-30A0A075B6S6 120 aa8.61□□□□□ -1.03
PNKP-225ENST00000636214 IGKV2-30P06310 120 aa8.61□□□□□ -1.03
PNKP-225ENST00000636214 H1FX-AS1Q4G0G2 97 aa8.6□□□□□ -1.03
PNKP-225ENST00000636214 TAX1BP3O14907 124 aa8.59□□□□□ -1.03
PNKP-225ENST00000636214 C7orf65Q6ZTY9 151 aa8.59□□□□□ -1.03
PNKP-225ENST00000636214 CASC2Q6XLA1 102 aa8.55□□□□□ -1.04
PNKP-225ENST00000636214 SPCS1Q9Y6A9 102 aa8.54□□□□□ -1.04
PNKP-225ENST00000636214 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
PNKP-225ENST00000636214 Q8N9L7 120 aa8.52□□□□□ -1.05
PNKP-225ENST00000636214 Q5W150 140 aa8.5□□□□□ -1.05
PNKP-225ENST00000636214 CXCL6P80162 114 aa8.48□□□□□ -1.05
PNKP-225ENST00000636214 UBL5Q9BZL1 73 aa8.48□□□□□ -1.05
PNKP-225ENST00000636214 KRTAP19-6Q3LI70 58 aa8.43□□□□□ -1.06
PNKP-225ENST00000636214 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
PNKP-225ENST00000636214 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
PNKP-225ENST00000636214 GTF2H5Q6ZYL4 71 aa8.4□□□□□ -1.06
PNKP-225ENST00000636214 K7EP34 96 aa8.39□□□□□ -1.07
PNKP-225ENST00000636214 MACF1Q9UPN3 7388 aaKnown RBP8.36□□□□□ -1.07
PNKP-225ENST00000636214 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
PNKP-225ENST00000636214 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
PNKP-225ENST00000636214 PRO0461Q9UI25 63 aa8.33□□□□□ -1.08
PNKP-225ENST00000636214 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
PNKP-225ENST00000636214 A0A1B0GV90 55 aa8.32□□□□□ -1.08
PNKP-225ENST00000636214 C5orf47Q569G3 176 aa8.32□□□□□ -1.08
PNKP-225ENST00000636214 S4R3F8 94 aa8.31□□□□□ -1.08
PNKP-225ENST00000636214 TP53AIP1Q9HCN2 124 aa8.29□□□□□ -1.08
PNKP-225ENST00000636214 C1orf64Q8NEQ6 169 aa8.27□□□□□ -1.09
PNKP-225ENST00000636214 F8W1H4 67 aa8.26□□□□□ -1.09
PNKP-225ENST00000636214 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
PNKP-225ENST00000636214 KRTAP3-1Q9BYR8 98 aa8.2□□□□□ -1.1
PNKP-225ENST00000636214 LCA10Q71F78 164 aa8.19□□□□□ -1.1
PNKP-225ENST00000636214 ETDBQ3ZM63 59 aa8.17□□□□□ -1.1
PNKP-225ENST00000636214 Q5VV11 94 aa8.13□□□□□ -1.11
PNKP-225ENST00000636214 KRTAP6-3Q3LI67 103 aa8.1□□□□□ -1.11
PNKP-225ENST00000636214 TRAV22A0A0B4J277 110 aa8.09□□□□□ -1.11
PNKP-225ENST00000636214 A6NN06 94 aa8.09□□□□□ -1.11
PNKP-225ENST00000636214 CYP4F30PQ9H0H9 118 aa8.09□□□□□ -1.11
PNKP-225ENST00000636214 LOC101927531A0A1B0GV80 90 aa8.08□□□□□ -1.12
PNKP-225ENST00000636214 KLKP1Q107X0 134 aa8.06□□□□□ -1.12
PNKP-225ENST00000636214 ACYP1P07311 99 aa8.05□□□□□ -1.12
PNKP-225ENST00000636214 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
PNKP-225ENST00000636214 MT1BP07438 61 aa8.02□□□□□ -1.13
PNKP-225ENST00000636214 KRTAP19-8Q3LI54 63 aa8.02□□□□□ -1.13
PNKP-225ENST00000636214 ATP5EP2Q5VTU8 51 aa8.02□□□□□ -1.13
PNKP-225ENST00000636214 HIST1H4AP62805 103 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms