RNA–Protein interactions for RNA: ENST00000635835.1

CACNB4-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,807 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-215	ENST00000635835	KRTAP13-1	Q8IUC0	172 aa		4.18	□□□□□ -1.74
CACNB4-215	ENST00000635835	CREBBP	Q92793	2442 aa		4.18	□□□□□ -1.74
CACNB4-215	ENST00000635835	AKAP9	Q99996	3911 aa		4.18	□□□□□ -1.74
CACNB4-215	ENST00000635835	FAM208B	Q5VWN6	2430 aa		4.18	□□□□□ -1.74
CACNB4-215	ENST00000635835		J3QKU1	62 aa		4.18	□□□□□ -1.74
CACNB4-215	ENST00000635835	USP9Y	O00507	2555 aa	Predicted RBP	4.17	□□□□□ -1.74
CACNB4-215	ENST00000635835	MYO18B	Q8IUG5	2567 aa		4.17	□□□□□ -1.74
CACNB4-215	ENST00000635835	EPG5	Q9HCE0	2579 aa		4.17	□□□□□ -1.74
CACNB4-215	ENST00000635835	CSMD2	Q7Z408	3487 aa		4.16	□□□□□ -1.74
CACNB4-215	ENST00000635835	HTN3	P15516	51 aa		4.16	□□□□□ -1.74
CACNB4-215	ENST00000635835	PTPN13	Q12923	2485 aa		4.16	□□□□□ -1.74
CACNB4-215	ENST00000635835	POLQ	O75417	2590 aa		4.15	□□□□□ -1.74
CACNB4-215	ENST00000635835	ZFYVE26	Q68DK2	2539 aa		4.15	□□□□□ -1.75
CACNB4-215	ENST00000635835	TEX15	Q9BXT5	2789 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835	KRTAP23-1	A1A580	65 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835	DEFB135	Q30KP9	77 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835	ZAN	Q9Y493	2812 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835	NAV2	Q8IVL1	2488 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835	KRTAP10-3	P60369	221 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835		Q8N1X5	172 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835	SPACA4	Q8TDM5	124 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835	KRTAP9-9	Q9BYP9	154 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835	KRTAP9-4	Q9BYQ2	154 aa		4.14	□□□□□ -1.75
CACNB4-215	ENST00000635835	MXRA5	Q9NR99	2828 aa		4.13	□□□□□ -1.75
CACNB4-215	ENST00000635835	LRRK2	Q5S007	2527 aa		4.13	□□□□□ -1.75
CACNB4-215	ENST00000635835	SPINK6	Q6UWN8	80 aa		4.13	□□□□□ -1.75
CACNB4-215	ENST00000635835		Q6ZRN7	208 aa	Predicted RBP	4.13	□□□□□ -1.75
CACNB4-215	ENST00000635835	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.13	□□□□□ -1.75
CACNB4-215	ENST00000635835	APC	P25054	2843 aa		4.13	□□□□□ -1.75
CACNB4-215	ENST00000635835	DEFB4A	O15263	64 aa		4.12	□□□□□ -1.75
CACNB4-215	ENST00000635835	NF1	P21359	2839 aa		4.11	□□□□□ -1.75
CACNB4-215	ENST00000635835	NBPF19	A0A087WUL8	3843 aa		4.11	□□□□□ -1.75
CACNB4-215	ENST00000635835	ABCA12	Q86UK0	2595 aa		4.11	□□□□□ -1.75
CACNB4-215	ENST00000635835	PDZD2	O15018	2839 aa		4.11	□□□□□ -1.75
CACNB4-215	ENST00000635835	KRTAP4-2	Q9BYR5	136 aa		4.1	□□□□□ -1.75
CACNB4-215	ENST00000635835		R4GN34	69 aa		4.1	□□□□□ -1.75
CACNB4-215	ENST00000635835	ITPR3	Q14573	2671 aa		4.09	□□□□□ -1.75
CACNB4-215	ENST00000635835	SMR3A	Q99954	134 aa		4.09	□□□□□ -1.76
CACNB4-215	ENST00000635835		S4R3F8	94 aa		4.09	□□□□□ -1.76
CACNB4-215	ENST00000635835	CENPE	Q02224	2701 aa		4.08	□□□□□ -1.76
CACNB4-215	ENST00000635835	INE1	O15225	51 aa		4.07	□□□□□ -1.76
CACNB4-215	ENST00000635835	ANK3	Q12955	4377 aa	Known RBP	4.07	□□□□□ -1.76
CACNB4-215	ENST00000635835	SON	P18583	2426 aa	Known RBP	4.06	□□□□□ -1.76
CACNB4-215	ENST00000635835	TENM4	Q6N022	2769 aa		4.05	□□□□□ -1.76
CACNB4-215	ENST00000635835	TLN2	Q9Y4G6	2542 aa		4.05	□□□□□ -1.76
CACNB4-215	ENST00000635835	FLNA	P21333	2647 aa	Known RBP	4.04	□□□□□ -1.76
CACNB4-215	ENST00000635835	CUBN	O60494	3623 aa		4.04	□□□□□ -1.76
CACNB4-215	ENST00000635835	APLN	Q9ULZ1	77 aa		4.04	□□□□□ -1.76
CACNB4-215	ENST00000635835	MYO9A	B2RTY4	2548 aa		4.03	□□□□□ -1.76
CACNB4-215	ENST00000635835	MAST4	O15021	2626 aa		4.03	□□□□□ -1.76
CACNB4-215	ENST00000635835	SETX	Q7Z333	2677 aa	Known RBP	4.03	□□□□□ -1.76
CACNB4-215	ENST00000635835	CCDC168	Q8NDH2	2452 aa		4.03	□□□□□ -1.76
CACNB4-215	ENST00000635835	UBE2DNL	Q8IWF7	75 aa		4.02	□□□□□ -1.77
CACNB4-215	ENST00000635835	ACAN	P16112	2415 aa		4.02	□□□□□ -1.77
CACNB4-215	ENST00000635835	FBN1	P35555	2871 aa	Known RBP	4.02	□□□□□ -1.77
CACNB4-215	ENST00000635835		A0A0D9SG42	100 aa		4.01	□□□□□ -1.77
CACNB4-215	ENST00000635835	KRTAP10-6	P60371	365 aa	Predicted RBP	4.01	□□□□□ -1.77
CACNB4-215	ENST00000635835	KRTAP13-4	Q3LI77	160 aa		4.01	□□□□□ -1.77
CACNB4-215	ENST00000635835	FASN	P49327	2511 aa	Known RBP	4	□□□□□ -1.77
CACNB4-215	ENST00000635835	HIVEP2	P31629	2446 aa		4	□□□□□ -1.77
CACNB4-215	ENST00000635835	ITPR2	Q14571	2701 aa		4	□□□□□ -1.77
CACNB4-215	ENST00000635835	GCN1	Q92616	2671 aa	Known RBP	4	□□□□□ -1.77
CACNB4-215	ENST00000635835	KRTAP3-1	Q9BYR8	98 aa		3.99	□□□□□ -1.77
CACNB4-215	ENST00000635835	KRTAP4-5	Q9BYR2	181 aa		3.98	□□□□□ -1.77
CACNB4-215	ENST00000635835	F8	P00451	2351 aa		3.98	□□□□□ -1.77
CACNB4-215	ENST00000635835	HELZ2	Q9BYK8	2649 aa	Known RBP	3.97	□□□□□ -1.77
CACNB4-215	ENST00000635835	MTOR	P42345	2549 aa		3.96	□□□□□ -1.78
CACNB4-215	ENST00000635835	KRTAP12-2	P59991	146 aa		3.96	□□□□□ -1.78
CACNB4-215	ENST00000635835	KRTAP10-11	P60412	298 aa		3.95	□□□□□ -1.78
CACNB4-215	ENST00000635835	KRTAP12-1	P59990	96 aa		3.94	□□□□□ -1.78
CACNB4-215	ENST00000635835	VWF	P04275	2813 aa		3.94	□□□□□ -1.78
CACNB4-215	ENST00000635835	FN1	P02751	2386 aa	Known RBP	3.93	□□□□□ -1.78
CACNB4-215	ENST00000635835	KRTAP10-8	P60410	259 aa		3.93	□□□□□ -1.78
CACNB4-215	ENST00000635835	KRTAP4-12	Q9BQ66	201 aa		3.93	□□□□□ -1.78
CACNB4-215	ENST00000635835	JMJD1C	Q15652	2540 aa		3.93	□□□□□ -1.78
CACNB4-215	ENST00000635835	SETD2	Q9BYW2	2564 aa	Predicted RBP	3.93	□□□□□ -1.78
CACNB4-215	ENST00000635835	KRTAP4-9	Q9BYQ8	210 aa		3.92	□□□□□ -1.78
CACNB4-215	ENST00000635835	FLNB	O75369	2602 aa	Known RBP	3.92	□□□□□ -1.78
CACNB4-215	ENST00000635835	NIPBL	Q6KC79	2804 aa	eCLIP	3.91	□□□□□ -1.78
CACNB4-215	ENST00000635835	HECTD1	Q9ULT8	2610 aa		3.91	□□□□□ -1.78
CACNB4-215	ENST00000635835	LCE1D	Q5T752	114 aa		3.89	□□□□□ -1.79
CACNB4-215	ENST00000635835	HIVEP1	P15822	2718 aa		3.88	□□□□□ -1.79
CACNB4-215	ENST00000635835	NOTCH2	Q04721	2471 aa		3.88	□□□□□ -1.79
CACNB4-215	ENST00000635835	NSD1	Q96L73	2696 aa	Predicted RBP	3.88	□□□□□ -1.79
CACNB4-215	ENST00000635835	SPRR5	A0A1B0GTR4	108 aa		3.88	□□□□□ -1.79
CACNB4-215	ENST00000635835	SRRM2	Q9UQ35	2752 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-215	ENST00000635835	PP632	Q6XCG6	107 aa		3.87	□□□□□ -1.79
CACNB4-215	ENST00000635835	DNAH1	Q9P2D7	4330 aa		3.86	□□□□□ -1.79
CACNB4-215	ENST00000635835	TEP1	Q99973	2627 aa	Known RBP	3.85	□□□□□ -1.79
CACNB4-215	ENST00000635835	MEGF8	Q7Z7M0	2845 aa		3.85	□□□□□ -1.79
CACNB4-215	ENST00000635835	TRRAP	Q9Y4A5	3859 aa		3.84	□□□□□ -1.79
CACNB4-215	ENST00000635835	TENM1	Q9UKZ4	2725 aa		3.84	□□□□□ -1.8
CACNB4-215	ENST00000635835	NBEAL2	Q6ZNJ1	2754 aa		3.84	□□□□□ -1.8
CACNB4-215	ENST00000635835	VPS13D	Q5THJ4	4388 aa		3.83	□□□□□ -1.8
CACNB4-215	ENST00000635835	CMYA5	Q8N3K9	4069 aa		3.83	□□□□□ -1.8
CACNB4-215	ENST00000635835	ATR	Q13535	2644 aa		3.82	□□□□□ -1.8
CACNB4-215	ENST00000635835	DNAH3	Q8TD57	4116 aa		3.8	□□□□□ -1.8
CACNB4-215	ENST00000635835	KRTAP19-1	Q8IUB9	90 aa		3.8	□□□□□ -1.8
CACNB4-215	ENST00000635835		M0QZ58	72 aa		3.78	□□□□□ -1.8
CACNB4-215	ENST00000635835	KRTAP1-5	Q9BYS1	174 aa		3.78	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms