RNA–Protein interactions for RNA: ENST00000633364.1

LIMS4-205, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 957 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-205ENST00000633364 LOC105371267A0A1B0GV96 52 aa8.01□□□□□ -1.13
LIMS4-205ENST00000633364 KRTAP10-6P60371 365 aaPredicted RBP8.01□□□□□ -1.13
LIMS4-205ENST00000633364 BATFQ16520 125 aa8.01□□□□□ -1.13
LIMS4-205ENST00000633364 FLGP20930 4061 aaPredicted RBP8□□□□□ -1.13
LIMS4-205ENST00000633364 JMJD7-PLA2G4BH0Y9G9 81 aa7.99□□□□□ -1.13
LIMS4-205ENST00000633364 A0A1B0GVX0 72 aa7.98□□□□□ -1.13
LIMS4-205ENST00000633364 KRTAP16-1A8MUX0 517 aa7.98□□□□□ -1.13
LIMS4-205ENST00000633364 C8orf87E5RJ46 101 aa7.98□□□□□ -1.13
LIMS4-205ENST00000633364 J3KT08 172 aa7.98□□□□□ -1.13
LIMS4-205ENST00000633364 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
LIMS4-205ENST00000633364 NDUFB1O75438 58 aa7.95□□□□□ -1.14
LIMS4-205ENST00000633364 Q6ZQT0 140 aa7.95□□□□□ -1.14
LIMS4-205ENST00000633364 FSIP2Q5CZC0 6907 aa7.94□□□□□ -1.14
LIMS4-205ENST00000633364 FAM236DA0A1B0GTK5 79 aa7.94□□□□□ -1.14
LIMS4-205ENST00000633364 FAM236CP0DP71 79 aa7.94□□□□□ -1.14
LIMS4-205ENST00000633364 PDE6GP18545 87 aa7.93□□□□□ -1.14
LIMS4-205ENST00000633364 A0A1B0GW54 56 aa7.92□□□□□ -1.14
LIMS4-205ENST00000633364 LOC110117498A0A087WWA1 95 aa7.91□□□□□ -1.14
LIMS4-205ENST00000633364 C9orf118A6NHY6 69 aa7.91□□□□□ -1.14
LIMS4-205ENST00000633364 C14orf132Q9NPU4 83 aa7.9□□□□□ -1.14
LIMS4-205ENST00000633364 RBM12B-AS1Q9P1G2 102 aa7.9□□□□□ -1.14
LIMS4-205ENST00000633364 TAX1BP3O14907 124 aa7.87□□□□□ -1.15
LIMS4-205ENST00000633364 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
LIMS4-205ENST00000633364 A0A1W2PPM0 123 aa7.86□□□□□ -1.15
LIMS4-205ENST00000633364 NREPQ16612 68 aa7.86□□□□□ -1.15
LIMS4-205ENST00000633364 A8MWP4 228 aa7.85□□□□□ -1.15
LIMS4-205ENST00000633364 ZCCHC13Q8WW36 166 aaKnown RBP7.84□□□□□ -1.15
LIMS4-205ENST00000633364 H3BT86 120 aa7.83□□□□□ -1.16
LIMS4-205ENST00000633364 C8orf17Q9NRJ1 99 aa7.83□□□□□ -1.16
LIMS4-205ENST00000633364 HRES1P13985 223 aa7.81□□□□□ -1.16
LIMS4-205ENST00000633364 MTURNQ8N3F0 131 aa7.81□□□□□ -1.16
LIMS4-205ENST00000633364 IGKV3D-7A0A0C4DH55 119 aa7.8□□□□□ -1.16
LIMS4-205ENST00000633364 Q8N9P0 234 aaPredicted RBP7.79□□□□□ -1.16
LIMS4-205ENST00000633364 SPINK7P58062 85 aa7.78□□□□□ -1.16
LIMS4-205ENST00000633364 Q6ZVQ6 151 aa7.78□□□□□ -1.16
LIMS4-205ENST00000633364 PRR15Q8IV56 129 aa7.77□□□□□ -1.17
LIMS4-205ENST00000633364 MPLKIPQ8TAP9 179 aa7.77□□□□□ -1.17
LIMS4-205ENST00000633364 SPCS1Q9Y6A9 102 aa7.77□□□□□ -1.17
LIMS4-205ENST00000633364 COL5A1-AS1Q5SY13 56 aa7.75□□□□□ -1.17
LIMS4-205ENST00000633364 NDUFS5O43920 106 aa7.71□□□□□ -1.18
LIMS4-205ENST00000633364 MRPL34Q9BQ48 92 aaKnown RBP7.71□□□□□ -1.18
LIMS4-205ENST00000633364 BPY2O14599 106 aa7.7□□□□□ -1.18
LIMS4-205ENST00000633364 TMEM254Q8TBM7 123 aa7.7□□□□□ -1.18
LIMS4-205ENST00000633364 KRTAP9-8Q9BYQ0 159 aa7.7□□□□□ -1.18
LIMS4-205ENST00000633364 MMP24-AS1A0A0U1RRL7 71 aa7.69□□□□□ -1.18
LIMS4-205ENST00000633364 hDV103S1A0JD37 113 aa7.69□□□□□ -1.18
LIMS4-205ENST00000633364 K7EQZ3 153 aa7.68□□□□□ -1.18
LIMS4-205ENST00000633364 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
LIMS4-205ENST00000633364 K7EP34 96 aa7.64□□□□□ -1.19
LIMS4-205ENST00000633364 MT2AP02795 61 aa7.61□□□□□ -1.19
LIMS4-205ENST00000633364 PRO0461Q9UI25 63 aa7.61□□□□□ -1.19
LIMS4-205ENST00000633364 PCP4L1A6NKN8 68 aa7.6□□□□□ -1.19
LIMS4-205ENST00000633364 KRTAP10-10P60014 251 aa7.6□□□□□ -1.19
LIMS4-205ENST00000633364 GTF2H5Q6ZYL4 71 aa7.59□□□□□ -1.19
LIMS4-205ENST00000633364 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
LIMS4-205ENST00000633364 Q8N9L7 120 aa7.58□□□□□ -1.2
LIMS4-205ENST00000633364 USH2AO75445 5202 aa7.57□□□□□ -1.2
LIMS4-205ENST00000633364 UBL5Q9BZL1 73 aa7.57□□□□□ -1.2
LIMS4-205ENST00000633364 IGKV2D-30A0A075B6S6 120 aa7.56□□□□□ -1.2
LIMS4-205ENST00000633364 IGKV2-30P06310 120 aa7.56□□□□□ -1.2
LIMS4-205ENST00000633364 MT1FP04733 61 aa7.55□□□□□ -1.2
LIMS4-205ENST00000633364 HCG22E2RYF7 251 aa7.54□□□□□ -1.2
LIMS4-205ENST00000633364 LINC00846Q9NV44 126 aa7.54□□□□□ -1.2
LIMS4-205ENST00000633364 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
LIMS4-205ENST00000633364 F8W1H4 67 aa7.51□□□□□ -1.21
LIMS4-205ENST00000633364 H1FX-AS1Q4G0G2 97 aa7.5□□□□□ -1.21
LIMS4-205ENST00000633364 Q5W150 140 aa7.5□□□□□ -1.21
LIMS4-205ENST00000633364 CXCL6P80162 114 aa7.49□□□□□ -1.21
LIMS4-205ENST00000633364 SSPOA2VEC9 5147 aa7.47□□□□□ -1.21
LIMS4-205ENST00000633364 ETDBQ3ZM63 59 aa7.46□□□□□ -1.22
LIMS4-205ENST00000633364 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
LIMS4-205ENST00000633364 C4orf26Q17RF5 130 aa7.4□□□□□ -1.22
LIMS4-205ENST00000633364 TP53AIP1Q9HCN2 124 aa7.36□□□□□ -1.23
LIMS4-205ENST00000633364 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
LIMS4-205ENST00000633364 ACYP1P07311 99 aa7.32□□□□□ -1.24
LIMS4-205ENST00000633364 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
LIMS4-205ENST00000633364 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.3□□□□□ -1.24
LIMS4-205ENST00000633364 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
LIMS4-205ENST00000633364 FAM240AA0A1B0GVK7 77 aa7.27□□□□□ -1.25
LIMS4-205ENST00000633364 C5orf47Q569G3 176 aa7.27□□□□□ -1.25
LIMS4-205ENST00000633364 S4R3F8 94 aa7.26□□□□□ -1.25
LIMS4-205ENST00000633364 ATP5EP2Q5VTU8 51 aa7.24□□□□□ -1.25
LIMS4-205ENST00000633364 FAM236AA0A1B0GUQ0 79 aa7.23□□□□□ -1.25
LIMS4-205ENST00000633364 FAM236BA0A1B0GV22 79 aa7.23□□□□□ -1.25
LIMS4-205ENST00000633364 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
LIMS4-205ENST00000633364 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
LIMS4-205ENST00000633364 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.26
LIMS4-205ENST00000633364 HIST1H4AP62805 103 aaKnown RBP7.2□□□□□ -1.26
LIMS4-205ENST00000633364 TRAV22A0A0B4J277 110 aa7.19□□□□□ -1.26
LIMS4-205ENST00000633364 A0A1B0GV90 55 aa7.17□□□□□ -1.26
LIMS4-205ENST00000633364 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
LIMS4-205ENST00000633364 LCA10Q71F78 164 aa7.17□□□□□ -1.26
LIMS4-205ENST00000633364 CYP4F30PQ9H0H9 118 aa7.17□□□□□ -1.26
LIMS4-205ENST00000633364 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
LIMS4-205ENST00000633364 LOC101927531A0A1B0GV80 90 aa7.16□□□□□ -1.26
LIMS4-205ENST00000633364 KRTAP4-6Q9BYQ5 205 aa7.16□□□□□ -1.26
LIMS4-205ENST00000633364 LINC00643Q86TS7 51 aa7.14□□□□□ -1.27
LIMS4-205ENST00000633364 UQCRQO14949 82 aa7.11□□□□□ -1.27
LIMS4-205ENST00000633364 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
LIMS4-205ENST00000633364 H0Y9P7 68 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms