RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 A0A1B0GW54 56 aa10.56□□□□□ -0.72
PNKP-224ENST00000631020 SS18L2Q9UHA2 77 aa10.55□□□□□ -0.72
PNKP-224ENST00000631020 A0A1W2PNM2 257 aa10.54□□□□□ -0.72
PNKP-224ENST00000631020 SMIM20Q8N5G0 67 aa10.53□□□□□ -0.72
PNKP-224ENST00000631020 Q5XG85 94 aa10.52□□□□□ -0.73
PNKP-224ENST00000631020 LIMD2Q9BT23 127 aa10.51□□□□□ -0.73
PNKP-224ENST00000631020 TPRXLQ17RH7 258 aa10.5□□□□□ -0.73
PNKP-224ENST00000631020 MUC2Q02817 5179 aa10.48□□□□□ -0.73
PNKP-224ENST00000631020 NREPQ16612 68 aa10.47□□□□□ -0.73
PNKP-224ENST00000631020 IGLV7-46A0A075B6I9 117 aa10.46□□□□□ -0.74
PNKP-224ENST00000631020 A0A087WSZ3 146 aa10.44□□□□□ -0.74
PNKP-224ENST00000631020 C1orf195Q5TG92 126 aa10.44□□□□□ -0.74
PNKP-224ENST00000631020 FP248Q71RG6 208 aaPredicted RBP10.43□□□□□ -0.74
PNKP-224ENST00000631020 ASB16-AS1Q495Z4 193 aa10.43□□□□□ -0.74
PNKP-224ENST00000631020 TRAV7A0A075B6U4 112 aa10.42□□□□□ -0.74
PNKP-224ENST00000631020 A0A0U1RQV1 116 aa10.41□□□□□ -0.74
PNKP-224ENST00000631020 BPY2O14599 106 aa10.39□□□□□ -0.75
PNKP-224ENST00000631020 TMEM258P61165 79 aa10.38□□□□□ -0.75
PNKP-224ENST00000631020 Q96NJ1 140 aa10.34□□□□□ -0.75
PNKP-224ENST00000631020 IGKV4-1P06312 121 aa10.31□□□□□ -0.76
PNKP-224ENST00000631020 KRTAP13-3Q3SY46 172 aa10.31□□□□□ -0.76
PNKP-224ENST00000631020 MUC17Q685J3 4493 aa10.31□□□□□ -0.76
PNKP-224ENST00000631020 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
PNKP-224ENST00000631020 C20orf197Q8N268 126 aa10.28□□□□□ -0.76
PNKP-224ENST00000631020 J3KT08 172 aa10.27□□□□□ -0.77
PNKP-224ENST00000631020 DEFB116Q30KQ4 102 aa10.26□□□□□ -0.77
PNKP-224ENST00000631020 NDUFC1O43677 76 aa10.24□□□□□ -0.77
PNKP-224ENST00000631020 RPS28P62857 69 aaKnown RBP10.24□□□□□ -0.77
PNKP-224ENST00000631020 KLKP1Q107X0 134 aa10.24□□□□□ -0.77
PNKP-224ENST00000631020 C9orf92A6NGG3 77 aa10.21□□□□□ -0.78
PNKP-224ENST00000631020 Q8N9L7 120 aa10.21□□□□□ -0.78
PNKP-224ENST00000631020 CYSTM1Q9H1C7 97 aa10.2□□□□□ -0.78
PNKP-224ENST00000631020 LCE2AQ5TA79 106 aaPredicted RBP10.17□□□□□ -0.78
PNKP-224ENST00000631020 FAM236DA0A1B0GTK5 79 aa10.17□□□□□ -0.78
PNKP-224ENST00000631020 FAM236CP0DP71 79 aa10.17□□□□□ -0.78
PNKP-224ENST00000631020 FAT4Q6V0I7 4981 aa10.16□□□□□ -0.78
PNKP-224ENST00000631020 ATP5EP56381 51 aaPredicted RBP10.16□□□□□ -0.78
PNKP-224ENST00000631020 SEC61BP60468 96 aaKnown RBP10.15□□□□□ -0.78
PNKP-224ENST00000631020 XP32Q5T750 250 aa10.15□□□□□ -0.78
PNKP-224ENST00000631020 TMEM254Q8TBM7 123 aa10.14□□□□□ -0.79
PNKP-224ENST00000631020 OCR1Q9BZK8 76 aa10.14□□□□□ -0.79
PNKP-224ENST00000631020 DSCR10P59022 87 aa10.13□□□□□ -0.79
PNKP-224ENST00000631020 H7BZZ5 65 aa10.12□□□□□ -0.79
PNKP-224ENST00000631020 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
PNKP-224ENST00000631020 HCG22E2RYF7 251 aa10.1□□□□□ -0.79
PNKP-224ENST00000631020 K7EQZ3 153 aa10.1□□□□□ -0.79
PNKP-224ENST00000631020 NOTCH2NLQ7Z3S9 236 aa10.09□□□□□ -0.79
PNKP-224ENST00000631020 IGHV6-1A0A0B4J1U7 121 aa10.07□□□□□ -0.8
PNKP-224ENST00000631020 A0A1B0GVX0 72 aa10.07□□□□□ -0.8
PNKP-224ENST00000631020 A8MWP4 228 aa10.06□□□□□ -0.8
PNKP-224ENST00000631020 SERP1Q9Y6X1 66 aa10.06□□□□□ -0.8
PNKP-224ENST00000631020 LINC00313P59037 77 aa10.05□□□□□ -0.8
PNKP-224ENST00000631020 NDUFB1O75438 58 aa10.02□□□□□ -0.8
PNKP-224ENST00000631020 C5orf47Q569G3 176 aa10.02□□□□□ -0.8
PNKP-224ENST00000631020 KRTAP4-1Q9BYQ7 146 aa10.02□□□□□ -0.81
PNKP-224ENST00000631020 KRTAP16-1A8MUX0 517 aa10.01□□□□□ -0.81
PNKP-224ENST00000631020 PRR15Q8IV56 129 aa10.01□□□□□ -0.81
PNKP-224ENST00000631020 C8orf87E5RJ46 101 aa9.98□□□□□ -0.81
PNKP-224ENST00000631020 RPL37P61927 97 aaKnown RBP9.98□□□□□ -0.81
PNKP-224ENST00000631020 C20orf166-AS1Q96NR2 134 aa9.96□□□□□ -0.82
PNKP-224ENST00000631020 C8orf17Q9NRJ1 99 aa9.96□□□□□ -0.82
PNKP-224ENST00000631020 MP68P56378 58 aa9.95□□□□□ -0.82
PNKP-224ENST00000631020 CASC2Q6XLA1 102 aa9.95□□□□□ -0.82
PNKP-224ENST00000631020 Q75L30 129 aa9.95□□□□□ -0.82
PNKP-224ENST00000631020 A8MUU9 505 aa9.94□□□□□ -0.82
PNKP-224ENST00000631020 WFDC13Q8IUB5 93 aa9.94□□□□□ -0.82
PNKP-224ENST00000631020 KRTAP9-2Q9BYQ4 174 aa9.94□□□□□ -0.82
PNKP-224ENST00000631020 PCOTHQ58A44 107 aa9.93□□□□□ -0.82
PNKP-224ENST00000631020 H3BPC8 53 aa9.92□□□□□ -0.82
PNKP-224ENST00000631020 MMP24-AS1A0A0U1RRL7 71 aa9.9□□□□□ -0.82
PNKP-224ENST00000631020 ZCCHC13Q8WW36 166 aaKnown RBP9.87□□□□□ -0.83
PNKP-224ENST00000631020 SMIM26A0A096LP01 95 aa9.87□□□□□ -0.83
PNKP-224ENST00000631020 Q8N9P0 234 aaPredicted RBP9.85□□□□□ -0.83
PNKP-224ENST00000631020 ATP11AUNQ6ZP68 121 aa9.84□□□□□ -0.83
PNKP-224ENST00000631020 hDV103S1A0JD37 113 aa9.83□□□□□ -0.84
PNKP-224ENST00000631020 SVIPQ8NHG7 77 aa9.82□□□□□ -0.84
PNKP-224ENST00000631020 H0Y9P7 68 aa9.82□□□□□ -0.84
PNKP-224ENST00000631020 TP53AIP1Q9HCN2 124 aa9.82□□□□□ -0.84
PNKP-224ENST00000631020 LCE2CQ5TA81 110 aa9.81□□□□□ -0.84
PNKP-224ENST00000631020 MRPL34Q9BQ48 92 aaKnown RBP9.81□□□□□ -0.84
PNKP-224ENST00000631020 KRTAP19-2Q3LHN2 52 aa9.79□□□□□ -0.84
PNKP-224ENST00000631020 TRAV22A0A0B4J277 110 aa9.77□□□□□ -0.84
PNKP-224ENST00000631020 LINC00208Q96KT6 92 aa9.77□□□□□ -0.84
PNKP-224ENST00000631020 CYP4F30PQ9H0H9 118 aa9.76□□□□□ -0.85
PNKP-224ENST00000631020 SPANXA2-OT1Q8N9U9 137 aa9.73□□□□□ -0.85
PNKP-224ENST00000631020 C1orf64Q8NEQ6 169 aa9.71□□□□□ -0.86
PNKP-224ENST00000631020 NDUFS5O43920 106 aa9.7□□□□□ -0.86
PNKP-224ENST00000631020 MT1HP80294 61 aa9.69□□□□□ -0.86
PNKP-224ENST00000631020 C4orf26Q17RF5 130 aa9.69□□□□□ -0.86
PNKP-224ENST00000631020 LCE2DQ5TA82 110 aaPredicted RBP9.66□□□□□ -0.86
PNKP-224ENST00000631020 Q5W150 140 aa9.62□□□□□ -0.87
PNKP-224ENST00000631020 KRTAP9-6A0A140TA67 174 aa9.61□□□□□ -0.87
PNKP-224ENST00000631020 V9GYY9 64 aa9.57□□□□□ -0.88
PNKP-224ENST00000631020 COX6B2Q6YFQ2 88 aa9.56□□□□□ -0.88
PNKP-224ENST00000631020 SPINK7P58062 85 aa9.56□□□□□ -0.88
PNKP-224ENST00000631020 MPLKIPQ8TAP9 179 aa9.55□□□□□ -0.88
PNKP-224ENST00000631020 LOC101927531A0A1B0GV80 90 aa9.54□□□□□ -0.88
PNKP-224ENST00000631020 Q1T7F1 81 aa9.53□□□□□ -0.88
PNKP-224ENST00000631020 LORP23490 312 aaPredicted RBP9.52□□□□□ -0.88
PNKP-224ENST00000631020 FLGP20930 4061 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms