RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907		A0A1B0GVX0	72 aa		14.06	□□□□□ -0.16
UBE3A-222	ENST00000630907	LINC00313	P59037	77 aa		14.06	□□□□□ -0.16
UBE3A-222	ENST00000630907	NDUFB1	O75438	58 aa		14.05	□□□□□ -0.16
UBE3A-222	ENST00000630907		Q6ZVQ6	151 aa		14.04	□□□□□ -0.16
UBE3A-222	ENST00000630907		A8MWP4	228 aa		14.03	□□□□□ -0.16
UBE3A-222	ENST00000630907	RPL37	P61927	97 aa	Known RBP	14.03	□□□□□ -0.16
UBE3A-222	ENST00000630907	LINC00846	Q9NV44	126 aa		14.03	□□□□□ -0.16
UBE3A-222	ENST00000630907	C8orf87	E5RJ46	101 aa		14	□□□□□ -0.17
UBE3A-222	ENST00000630907	NOTCH2NL	Q7Z3S9	236 aa		14	□□□□□ -0.17
UBE3A-222	ENST00000630907	UBL5	Q9BZL1	73 aa		13.99	□□□□□ -0.17
UBE3A-222	ENST00000630907	BPY2	O14599	106 aa		13.98	□□□□□ -0.17
UBE3A-222	ENST00000630907	IGKV3D-7	A0A0C4DH55	119 aa		13.97	□□□□□ -0.17
UBE3A-222	ENST00000630907		Q75L30	129 aa		13.97	□□□□□ -0.17
UBE3A-222	ENST00000630907	PCOTH	Q58A44	107 aa		13.95	□□□□□ -0.18
UBE3A-222	ENST00000630907	C20orf166-AS1	Q96NR2	134 aa		13.94	□□□□□ -0.18
UBE3A-222	ENST00000630907	KRTAP16-1	A8MUX0	517 aa		13.93	□□□□□ -0.18
UBE3A-222	ENST00000630907	PRR15	Q8IV56	129 aa		13.93	□□□□□ -0.18
UBE3A-222	ENST00000630907		A8MUU9	505 aa		13.92	□□□□□ -0.18
UBE3A-222	ENST00000630907	C8orf17	Q9NRJ1	99 aa		13.89	□□□□□ -0.19
UBE3A-222	ENST00000630907		K7EQZ3	153 aa		13.87	□□□□□ -0.19
UBE3A-222	ENST00000630907	ACYP1	P07311	99 aa		13.87	□□□□□ -0.19
UBE3A-222	ENST00000630907	ATP11AUN	Q6ZP68	121 aa		13.86	□□□□□ -0.19
UBE3A-222	ENST00000630907	FAM240A	A0A1B0GVK7	77 aa		13.83	□□□□□ -0.2
UBE3A-222	ENST00000630907	MUC2	Q02817	5179 aa		13.83	□□□□□ -0.2
UBE3A-222	ENST00000630907	KRTAP4-1	Q9BYQ7	146 aa		13.82	□□□□□ -0.2
UBE3A-222	ENST00000630907		Q8N9L7	120 aa		13.8	□□□□□ -0.2
UBE3A-222	ENST00000630907	MMP24-AS1	A0A0U1RRL7	71 aa		13.78	□□□□□ -0.2
UBE3A-222	ENST00000630907	CXCL6	P80162	114 aa		13.73	□□□□□ -0.21
UBE3A-222	ENST00000630907		Q8N9P0	234 aa	Predicted RBP	13.72	□□□□□ -0.21
UBE3A-222	ENST00000630907	TMEM254	Q8TBM7	123 aa		13.72	□□□□□ -0.21
UBE3A-222	ENST00000630907	hDV103S1	A0JD37	113 aa		13.71	□□□□□ -0.21
UBE3A-222	ENST00000630907	MRPL34	Q9BQ48	92 aa	Known RBP	13.69	□□□□□ -0.22
UBE3A-222	ENST00000630907		J3QR89	54 aa		13.67	□□□□□ -0.22
UBE3A-222	ENST00000630907	WFDC13	Q8IUB5	93 aa		13.65	□□□□□ -0.22
UBE3A-222	ENST00000630907		A0A0U1RQV1	116 aa		13.64	□□□□□ -0.23
UBE3A-222	ENST00000630907	CASC2	Q6XLA1	102 aa		13.64	□□□□□ -0.23
UBE3A-222	ENST00000630907	ATP5EP2	Q5VTU8	51 aa		13.61	□□□□□ -0.23
UBE3A-222	ENST00000630907	ZCCHC13	Q8WW36	166 aa	Known RBP	13.6	□□□□□ -0.23
UBE3A-222	ENST00000630907	HCG22	E2RYF7	251 aa		13.59	□□□□□ -0.23
UBE3A-222	ENST00000630907	NDUFS5	O43920	106 aa		13.57	□□□□□ -0.24
UBE3A-222	ENST00000630907	LINC00643	Q86TS7	51 aa		13.57	□□□□□ -0.24
UBE3A-222	ENST00000630907	HIST1H4A	P62805	103 aa	Known RBP	13.46	□□□□□ -0.25
UBE3A-222	ENST00000630907	FAT4	Q6V0I7	4981 aa		13.46	□□□□□ -0.26
UBE3A-222	ENST00000630907		K7ERU9	68 aa		13.43	□□□□□ -0.26
UBE3A-222	ENST00000630907	KRTAP19-2	Q3LHN2	52 aa		13.39	□□□□□ -0.27
UBE3A-222	ENST00000630907	SPINK7	P58062	85 aa		13.36	□□□□□ -0.27
UBE3A-222	ENST00000630907		Q5W150	140 aa		13.35	□□□□□ -0.27
UBE3A-222	ENST00000630907	LCE2C	Q5TA81	110 aa		13.33	□□□□□ -0.28
UBE3A-222	ENST00000630907	TP53AIP1	Q9HCN2	124 aa		13.32	□□□□□ -0.28
UBE3A-222	ENST00000630907		A0A087WVE0	104 aa		13.31	□□□□□ -0.28
UBE3A-222	ENST00000630907	COX6B2	Q6YFQ2	88 aa		13.31	□□□□□ -0.28
UBE3A-222	ENST00000630907	HRES1	P13985	223 aa		13.3	□□□□□ -0.28
UBE3A-222	ENST00000630907	LCE2A	Q5TA79	106 aa	Predicted RBP	13.23	□□□□□ -0.29
UBE3A-222	ENST00000630907	MPLKIP	Q8TAP9	179 aa		13.22	□□□□□ -0.29
UBE3A-222	ENST00000630907	RBM12B-AS1	Q9P1G2	102 aa		13.22	□□□□□ -0.29
UBE3A-222	ENST00000630907	IGKV2D-30	A0A075B6S6	120 aa		13.21	□□□□□ -0.29
UBE3A-222	ENST00000630907	IGKV2-30	P06310	120 aa		13.21	□□□□□ -0.29
UBE3A-222	ENST00000630907	C7orf65	Q6ZTY9	151 aa		13.18	□□□□□ -0.3
UBE3A-222	ENST00000630907	FAM236D	A0A1B0GTK5	79 aa		13.15	□□□□□ -0.3
UBE3A-222	ENST00000630907	FAM236C	P0DP71	79 aa		13.15	□□□□□ -0.3
UBE3A-222	ENST00000630907	MT-ATP8	P03928	68 aa		13.14	□□□□□ -0.31
UBE3A-222	ENST00000630907	MT1H	P80294	61 aa		13.13	□□□□□ -0.31
UBE3A-222	ENST00000630907	IMUP	Q9GZP8	106 aa		13.12	□□□□□ -0.31
UBE3A-222	ENST00000630907	FLG	P20930	4061 aa	Predicted RBP	13.1	□□□□□ -0.31
UBE3A-222	ENST00000630907	UQCRQ	O14949	82 aa		13.1	□□□□□ -0.31
UBE3A-222	ENST00000630907	TRAV22	A0A0B4J277	110 aa		13.07	□□□□□ -0.32
UBE3A-222	ENST00000630907	SCGB1A1	P11684	91 aa		13	□□□□□ -0.33
UBE3A-222	ENST00000630907	OCR1	Q9BZK8	76 aa		13	□□□□□ -0.33
UBE3A-222	ENST00000630907		H0Y9P7	68 aa		12.98	□□□□□ -0.33
UBE3A-222	ENST00000630907		M0R2T5	61 aa		12.98	□□□□□ -0.33
UBE3A-222	ENST00000630907	ATOX1	O00244	68 aa		12.96	□□□□□ -0.33
UBE3A-222	ENST00000630907	LOC101927531	A0A1B0GV80	90 aa		12.95	□□□□□ -0.34
UBE3A-222	ENST00000630907	CYP4F30P	Q9H0H9	118 aa		12.93	□□□□□ -0.34
UBE3A-222	ENST00000630907	C4orf26	Q17RF5	130 aa		12.91	□□□□□ -0.34
UBE3A-222	ENST00000630907	FAM236A	A0A1B0GUQ0	79 aa		12.88	□□□□□ -0.35
UBE3A-222	ENST00000630907	FAM236B	A0A1B0GV22	79 aa		12.88	□□□□□ -0.35
UBE3A-222	ENST00000630907	MP68	P56378	58 aa		12.87	□□□□□ -0.35
UBE3A-222	ENST00000630907	C5orf47	Q569G3	176 aa		12.86	□□□□□ -0.35
UBE3A-222	ENST00000630907	C1orf64	Q8NEQ6	169 aa		12.85	□□□□□ -0.35
UBE3A-222	ENST00000630907	H1FX-AS1	Q4G0G2	97 aa		12.83	□□□□□ -0.36
UBE3A-222	ENST00000630907	LINC00208	Q96KT6	92 aa		12.83	□□□□□ -0.36
UBE3A-222	ENST00000630907	KRTAP10-6	P60371	365 aa	Predicted RBP	12.79	□□□□□ -0.36
UBE3A-222	ENST00000630907	SMIM20	Q8N5G0	67 aa		12.78	□□□□□ -0.36
UBE3A-222	ENST00000630907		H3BPC8	53 aa		12.75	□□□□□ -0.37
UBE3A-222	ENST00000630907	LOR	P23490	312 aa	Predicted RBP	12.74	□□□□□ -0.37
UBE3A-222	ENST00000630907	TRAV7	A0A075B6U4	112 aa		12.73	□□□□□ -0.37
UBE3A-222	ENST00000630907	KRTAP3-1	Q9BYR8	98 aa		12.72	□□□□□ -0.37
UBE3A-222	ENST00000630907	KLKP1	Q107X0	134 aa		12.66	□□□□□ -0.38
UBE3A-222	ENST00000630907		S4R3F8	94 aa		12.53	□□□□□ -0.4
UBE3A-222	ENST00000630907	SERP2	Q8N6R1	65 aa		12.52	□□□□□ -0.41
UBE3A-222	ENST00000630907	KRTAP9-8	Q9BYQ0	159 aa		12.52	□□□□□ -0.41
UBE3A-222	ENST00000630907		A8MUN3	132 aa		12.47	□□□□□ -0.41
UBE3A-222	ENST00000630907	LCA10	Q71F78	164 aa		12.44	□□□□□ -0.42
UBE3A-222	ENST00000630907	MT2A	P02795	61 aa		12.41	□□□□□ -0.42
UBE3A-222	ENST00000630907	SNURF	Q9Y675	71 aa		12.41	□□□□□ -0.42
UBE3A-222	ENST00000630907	C20orf197	Q8N268	126 aa		12.39	□□□□□ -0.43
UBE3A-222	ENST00000630907	LCE2D	Q5TA82	110 aa	Predicted RBP	12.37	□□□□□ -0.43
UBE3A-222	ENST00000630907	CSAG1	Q6PB30	78 aa		12.37	□□□□□ -0.43
UBE3A-222	ENST00000630907	KRTAP9-2	Q9BYQ4	174 aa		12.35	□□□□□ -0.43
UBE3A-222	ENST00000630907	DMAC1	Q96GE9	116 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms