RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 MT1HP80294 61 aa5.6□□□□□ -1.51
SOX2-OT-257ENST00000630553 RBM3P98179 157 aaKnown RBP5.6□□□□□ -1.51
SOX2-OT-257ENST00000630553 LOC110117498A0A087WWA1 95 aa5.59□□□□□ -1.51
SOX2-OT-257ENST00000630553 PCP4L1A6NKN8 68 aa5.59□□□□□ -1.51
SOX2-OT-257ENST00000630553 SPCS1Q9Y6A9 102 aa5.59□□□□□ -1.51
SOX2-OT-257ENST00000630553 M0R2T5 61 aa5.58□□□□□ -1.52
SOX2-OT-257ENST00000630553 A0A087WSZ3 146 aa5.57□□□□□ -1.52
SOX2-OT-257ENST00000630553 A0A1B0GW54 56 aa5.57□□□□□ -1.52
SOX2-OT-257ENST00000630553 CCKP06307 115 aa5.57□□□□□ -1.52
SOX2-OT-257ENST00000630553 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
SOX2-OT-257ENST00000630553 Q96NJ1 140 aa5.57□□□□□ -1.52
SOX2-OT-257ENST00000630553 DSCR8Q96T75 97 aa5.57□□□□□ -1.52
SOX2-OT-257ENST00000630553 K7EP34 96 aa5.56□□□□□ -1.52
SOX2-OT-257ENST00000630553 PDE6GP18545 87 aa5.56□□□□□ -1.52
SOX2-OT-257ENST00000630553 Q6ZQT0 140 aa5.56□□□□□ -1.52
SOX2-OT-257ENST00000630553 A0A1B0GV72 72 aa5.55□□□□□ -1.52
SOX2-OT-257ENST00000630553 PRO0461Q9UI25 63 aa5.55□□□□□ -1.52
SOX2-OT-257ENST00000630553 MTURNQ8N3F0 131 aa5.52□□□□□ -1.53
SOX2-OT-257ENST00000630553 LINC00472Q9H8W2 130 aa5.52□□□□□ -1.53
SOX2-OT-257ENST00000630553 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
SOX2-OT-257ENST00000630553 GTF2H5Q6ZYL4 71 aa5.51□□□□□ -1.53
SOX2-OT-257ENST00000630553 C14orf132Q9NPU4 83 aa5.51□□□□□ -1.53
SOX2-OT-257ENST00000630553 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
SOX2-OT-257ENST00000630553 VPS25Q9BRG1 176 aa5.48□□□□□ -1.53
SOX2-OT-257ENST00000630553 F8W1H4 67 aa5.47□□□□□ -1.53
SOX2-OT-257ENST00000630553 C9orf92A6NGG3 77 aa5.46□□□□□ -1.54
SOX2-OT-257ENST00000630553 PCOTHQ58A44 107 aa5.46□□□□□ -1.54
SOX2-OT-257ENST00000630553 COX6B2Q6YFQ2 88 aa5.46□□□□□ -1.54
SOX2-OT-257ENST00000630553 J3KT08 172 aa5.45□□□□□ -1.54
SOX2-OT-257ENST00000630553 IGKV4-1P06312 121 aa5.44□□□□□ -1.54
SOX2-OT-257ENST00000630553 RPL37P61927 97 aaKnown RBP5.44□□□□□ -1.54
SOX2-OT-257ENST00000630553 Q75L30 129 aa5.43□□□□□ -1.54
SOX2-OT-257ENST00000630553 SIGMAR1Q99720 223 aa5.43□□□□□ -1.54
SOX2-OT-257ENST00000630553 C20orf166-AS1Q96NR2 134 aa5.42□□□□□ -1.54
SOX2-OT-257ENST00000630553 A0A1B0GVX0 72 aa5.41□□□□□ -1.54
SOX2-OT-257ENST00000630553 KRTAP16-1A8MUX0 517 aa5.41□□□□□ -1.54
SOX2-OT-257ENST00000630553 SSPOA2VEC9 5147 aa5.4□□□□□ -1.54
SOX2-OT-257ENST00000630553 A8MUU9 505 aa5.4□□□□□ -1.54
SOX2-OT-257ENST00000630553 C8orf87E5RJ46 101 aa5.4□□□□□ -1.54
SOX2-OT-257ENST00000630553 USH2AO75445 5202 aa5.4□□□□□ -1.55
SOX2-OT-257ENST00000630553 A8MWP4 228 aa5.39□□□□□ -1.55
SOX2-OT-257ENST00000630553 DEFB116Q30KQ4 102 aa5.39□□□□□ -1.55
SOX2-OT-257ENST00000630553 ETDBQ3ZM63 59 aa5.39□□□□□ -1.55
SOX2-OT-257ENST00000630553 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
SOX2-OT-257ENST00000630553 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
SOX2-OT-257ENST00000630553 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
SOX2-OT-257ENST00000630553 LINC00313P59037 77 aa5.38□□□□□ -1.55
SOX2-OT-257ENST00000630553 NREPQ16612 68 aa5.38□□□□□ -1.55
SOX2-OT-257ENST00000630553 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
SOX2-OT-257ENST00000630553 DSCR10P59022 87 aa5.37□□□□□ -1.55
SOX2-OT-257ENST00000630553 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
SOX2-OT-257ENST00000630553 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
SOX2-OT-257ENST00000630553 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
SOX2-OT-257ENST00000630553 IGKV3D-7A0A0C4DH55 119 aa5.36□□□□□ -1.55
SOX2-OT-257ENST00000630553 Q6ZVQ6 151 aa5.36□□□□□ -1.55
SOX2-OT-257ENST00000630553 NOTCH2NLQ7Z3S9 236 aa5.36□□□□□ -1.55
SOX2-OT-257ENST00000630553 IGHV6-1A0A0B4J1U7 121 aa5.35□□□□□ -1.55
SOX2-OT-257ENST00000630553 A0A1B0GV90 55 aa5.35□□□□□ -1.55
SOX2-OT-257ENST00000630553 NDUFB1O75438 58 aa5.35□□□□□ -1.55
SOX2-OT-257ENST00000630553 LINC00846Q9NV44 126 aa5.35□□□□□ -1.55
SOX2-OT-257ENST00000630553 PRR15Q8IV56 129 aa5.34□□□□□ -1.55
SOX2-OT-257ENST00000630553 FAM240AA0A1B0GVK7 77 aa5.32□□□□□ -1.56
SOX2-OT-257ENST00000630553 Q8N9P0 234 aaPredicted RBP5.32□□□□□ -1.56
SOX2-OT-257ENST00000630553 UBL5Q9BZL1 73 aa5.32□□□□□ -1.56
SOX2-OT-257ENST00000630553 C8orf17Q9NRJ1 99 aa5.32□□□□□ -1.56
SOX2-OT-257ENST00000630553 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
SOX2-OT-257ENST00000630553 K7EQZ3 153 aa5.31□□□□□ -1.56
SOX2-OT-257ENST00000630553 BPY2O14599 106 aa5.31□□□□□ -1.56
SOX2-OT-257ENST00000630553 ACYP1P07311 99 aa5.3□□□□□ -1.56
SOX2-OT-257ENST00000630553 ATP11AUNQ6ZP68 121 aa5.3□□□□□ -1.56
SOX2-OT-257ENST00000630553 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
SOX2-OT-257ENST00000630553 TMEM254Q8TBM7 123 aa5.28□□□□□ -1.56
SOX2-OT-257ENST00000630553 CXCL6P80162 114 aa5.27□□□□□ -1.57
SOX2-OT-257ENST00000630553 MRPL34Q9BQ48 92 aaKnown RBP5.25□□□□□ -1.57
SOX2-OT-257ENST00000630553 hDV103S1A0JD37 113 aa5.24□□□□□ -1.57
SOX2-OT-257ENST00000630553 Q8N9L7 120 aa5.23□□□□□ -1.57
SOX2-OT-257ENST00000630553 ZCCHC13Q8WW36 166 aaKnown RBP5.23□□□□□ -1.57
SOX2-OT-257ENST00000630553 ATP5EP2Q5VTU8 51 aa5.22□□□□□ -1.57
SOX2-OT-257ENST00000630553 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
SOX2-OT-257ENST00000630553 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
SOX2-OT-257ENST00000630553 CASC2Q6XLA1 102 aa5.19□□□□□ -1.58
SOX2-OT-257ENST00000630553 MPLKIPQ8TAP9 179 aa5.19□□□□□ -1.58
SOX2-OT-257ENST00000630553 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
SOX2-OT-257ENST00000630553 J3QR89 54 aa5.16□□□□□ -1.58
SOX2-OT-257ENST00000630553 HRES1P13985 223 aa5.16□□□□□ -1.58
SOX2-OT-257ENST00000630553 LINC00643Q86TS7 51 aa5.16□□□□□ -1.58
SOX2-OT-257ENST00000630553 WFDC13Q8IUB5 93 aa5.16□□□□□ -1.58
SOX2-OT-257ENST00000630553 SPINK7P58062 85 aa5.12□□□□□ -1.59
SOX2-OT-257ENST00000630553 Q5W150 140 aa5.12□□□□□ -1.59
SOX2-OT-257ENST00000630553 NDUFS5O43920 106 aa5.11□□□□□ -1.59
SOX2-OT-257ENST00000630553 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
SOX2-OT-257ENST00000630553 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
SOX2-OT-257ENST00000630553 TP53AIP1Q9HCN2 124 aa5.11□□□□□ -1.59
SOX2-OT-257ENST00000630553 MT2AP02795 61 aa5.1□□□□□ -1.59
SOX2-OT-257ENST00000630553 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
SOX2-OT-257ENST00000630553 KRTAP10-10P60014 251 aa5.09□□□□□ -1.59
SOX2-OT-257ENST00000630553 K7ERU9 68 aa5.07□□□□□ -1.6
SOX2-OT-257ENST00000630553 C7orf65Q6ZTY9 151 aa5.07□□□□□ -1.6
SOX2-OT-257ENST00000630553 RBM12B-AS1Q9P1G2 102 aa5.07□□□□□ -1.6
SOX2-OT-257ENST00000630553 MT1FP04733 61 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms