RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 WFDC13Q8IUB5 93 aa7.43□□□□□ -1.22
PDLIM3-213ENST00000629667 C14orf144Q96I85 54 aa7.43□□□□□ -1.22
PDLIM3-213ENST00000629667 DNAL4O96015 105 aa7.42□□□□□ -1.22
PDLIM3-213ENST00000629667 ORMDL1Q9P0S3 153 aa7.42□□□□□ -1.22
PDLIM3-213ENST00000629667 PRO1854Q9UHT4 67 aa7.41□□□□□ -1.22
PDLIM3-213ENST00000629667 H3BQ85 93 aa7.4□□□□□ -1.22
PDLIM3-213ENST00000629667 TMEM256-PLSCR3K7ERE1 68 aa7.39□□□□□ -1.23
PDLIM3-213ENST00000629667 TRIAP1O43715 76 aa7.39□□□□□ -1.23
PDLIM3-213ENST00000629667 C2orf91Q6ZV80 131 aa7.39□□□□□ -1.23
PDLIM3-213ENST00000629667 HIGD1BQ9P298 99 aa7.39□□□□□ -1.23
PDLIM3-213ENST00000629667 NEBP20929 6669 aa7.38□□□□□ -1.23
PDLIM3-213ENST00000629667 LOC105371267A0A1B0GV96 52 aa7.37□□□□□ -1.23
PDLIM3-213ENST00000629667 VPS25Q9BRG1 176 aa7.37□□□□□ -1.23
PDLIM3-213ENST00000629667 TMEM238LA0A1B0GVL6 79 aa7.36□□□□□ -1.23
PDLIM3-213ENST00000629667 A6NJY4 79 aa7.36□□□□□ -1.23
PDLIM3-213ENST00000629667 LYRM7Q5U5X0 104 aa7.36□□□□□ -1.23
PDLIM3-213ENST00000629667 CEND1Q8N111 149 aa7.35□□□□□ -1.23
PDLIM3-213ENST00000629667 J3KT08 172 aa7.33□□□□□ -1.24
PDLIM3-213ENST00000629667 SMIM6P0DI80 62 aa7.33□□□□□ -1.24
PDLIM3-213ENST00000629667 NDUFB1O75438 58 aa7.31□□□□□ -1.24
PDLIM3-213ENST00000629667 PSMB2P49721 201 aa7.31□□□□□ -1.24
PDLIM3-213ENST00000629667 UBE2V1Q13404 147 aa7.31□□□□□ -1.24
PDLIM3-213ENST00000629667 UQCR10Q9UDW1 63 aa7.3□□□□□ -1.24
PDLIM3-213ENST00000629667 MUC12Q9UKN1 5478 aa7.3□□□□□ -1.24
PDLIM3-213ENST00000629667 FXYD2P54710 66 aa7.29□□□□□ -1.24
PDLIM3-213ENST00000629667 COX6CP09669 75 aa7.28□□□□□ -1.24
PDLIM3-213ENST00000629667 RBM3P98179 157 aaKnown RBP7.28□□□□□ -1.24
PDLIM3-213ENST00000629667 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
PDLIM3-213ENST00000629667 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
PDLIM3-213ENST00000629667 HSD52Q0P140 79 aa7.26□□□□□ -1.25
PDLIM3-213ENST00000629667 C21orf62-AS1Q17RA5 79 aa7.26□□□□□ -1.25
PDLIM3-213ENST00000629667 C8orf17Q9NRJ1 99 aa7.26□□□□□ -1.25
PDLIM3-213ENST00000629667 IGKV3D-7A0A0C4DH55 119 aa7.24□□□□□ -1.25
PDLIM3-213ENST00000629667 KRTAP20-1Q3LI63 56 aa7.24□□□□□ -1.25
PDLIM3-213ENST00000629667 A6NN06 94 aa7.23□□□□□ -1.25
PDLIM3-213ENST00000629667 Q6ZQT0 140 aa7.23□□□□□ -1.25
PDLIM3-213ENST00000629667 C9JAW5 83 aa7.21□□□□□ -1.26
PDLIM3-213ENST00000629667 K7ERJ3 54 aa7.2□□□□□ -1.26
PDLIM3-213ENST00000629667 Q6ZVQ6 151 aa7.2□□□□□ -1.26
PDLIM3-213ENST00000629667 TSTD3H0UI37 97 aa7.17□□□□□ -1.26
PDLIM3-213ENST00000629667 SCGB1C2P0DMR2 95 aa7.13□□□□□ -1.27
PDLIM3-213ENST00000629667 BAALC-AS2P0C853 105 aa7.12□□□□□ -1.27
PDLIM3-213ENST00000629667 MRPL34Q9BQ48 92 aaKnown RBP7.12□□□□□ -1.27
PDLIM3-213ENST00000629667 FAM236AA0A1B0GUQ0 79 aa7.11□□□□□ -1.27
PDLIM3-213ENST00000629667 FAM236BA0A1B0GV22 79 aa7.11□□□□□ -1.27
PDLIM3-213ENST00000629667 M0R143 59 aa7.11□□□□□ -1.27
PDLIM3-213ENST00000629667 SMCPP49901 116 aaPredicted RBP7.11□□□□□ -1.27
PDLIM3-213ENST00000629667 PRR15Q8IV56 129 aa7.11□□□□□ -1.27
PDLIM3-213ENST00000629667 IGKV2D-30A0A075B6S6 120 aa7.1□□□□□ -1.27
PDLIM3-213ENST00000629667 A0A1B0GW54 56 aa7.1□□□□□ -1.27
PDLIM3-213ENST00000629667 NDUFS5O43920 106 aa7.1□□□□□ -1.27
PDLIM3-213ENST00000629667 IGKV2-30P06310 120 aa7.1□□□□□ -1.27
PDLIM3-213ENST00000629667 MT1BP07438 61 aa7.1□□□□□ -1.27
PDLIM3-213ENST00000629667 Q5VV11 94 aa7.1□□□□□ -1.27
PDLIM3-213ENST00000629667 TMEM254Q8TBM7 123 aa7.1□□□□□ -1.27
PDLIM3-213ENST00000629667 MMP24-AS1A0A0U1RRL7 71 aa7.07□□□□□ -1.28
PDLIM3-213ENST00000629667 C7orf65Q6ZTY9 151 aa7.06□□□□□ -1.28
PDLIM3-213ENST00000629667 JMJD7-PLA2G4BH0Y9G9 81 aa7.05□□□□□ -1.28
PDLIM3-213ENST00000629667 KRTAP5-9P26371 169 aa7.05□□□□□ -1.28
PDLIM3-213ENST00000629667 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
PDLIM3-213ENST00000629667 LOC110117498A0A087WWA1 95 aa7.04□□□□□ -1.28
PDLIM3-213ENST00000629667 hDV103S1A0JD37 113 aa7.04□□□□□ -1.28
PDLIM3-213ENST00000629667 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
PDLIM3-213ENST00000629667 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
PDLIM3-213ENST00000629667 NREPQ16612 68 aa7.03□□□□□ -1.28
PDLIM3-213ENST00000629667 PDE6GP18545 87 aa7.02□□□□□ -1.29
PDLIM3-213ENST00000629667 BATFQ16520 125 aa7.02□□□□□ -1.29
PDLIM3-213ENST00000629667 KRTAP19-8Q3LI54 63 aa7.02□□□□□ -1.29
PDLIM3-213ENST00000629667 C4orf26Q17RF5 130 aa7.01□□□□□ -1.29
PDLIM3-213ENST00000629667 SPRR2GQ9BYE4 73 aa7□□□□□ -1.29
PDLIM3-213ENST00000629667 KMT2DO14686 5537 aa7□□□□□ -1.29
PDLIM3-213ENST00000629667 MDN1Q9NU22 5596 aa7□□□□□ -1.29
PDLIM3-213ENST00000629667 Q5W150 140 aa6.99□□□□□ -1.29
PDLIM3-213ENST00000629667 NAA38Q9BRA0 125 aaKnown RBP6.99□□□□□ -1.29
PDLIM3-213ENST00000629667 K7EQZ3 153 aa6.98□□□□□ -1.29
PDLIM3-213ENST00000629667 C14orf132Q9NPU4 83 aa6.98□□□□□ -1.29
PDLIM3-213ENST00000629667 TAX1BP3O14907 124 aa6.97□□□□□ -1.29
PDLIM3-213ENST00000629667 ATXN8Q156A1 80 aa6.97□□□□□ -1.29
PDLIM3-213ENST00000629667 PCP4L1A6NKN8 68 aa6.96□□□□□ -1.3
PDLIM3-213ENST00000629667 C9orf118A6NHY6 69 aa6.94□□□□□ -1.3
PDLIM3-213ENST00000629667 KRTAP2-3P0C7H8 128 aa6.94□□□□□ -1.3
PDLIM3-213ENST00000629667 KRTAP2-4Q9BYR9 128 aa6.94□□□□□ -1.3
PDLIM3-213ENST00000629667 CSAG1Q6PB30 78 aa6.93□□□□□ -1.3
PDLIM3-213ENST00000629667 S4R3F8 94 aa6.92□□□□□ -1.3
PDLIM3-213ENST00000629667 IMUPQ9GZP8 106 aa6.91□□□□□ -1.3
PDLIM3-213ENST00000629667 A0A1W2PPM0 123 aa6.89□□□□□ -1.31
PDLIM3-213ENST00000629667 HCG22E2RYF7 251 aa6.88□□□□□ -1.31
PDLIM3-213ENST00000629667 COL5A1-AS1Q5SY13 56 aa6.88□□□□□ -1.31
PDLIM3-213ENST00000629667 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
PDLIM3-213ENST00000629667 LCA10Q71F78 164 aa6.87□□□□□ -1.31
PDLIM3-213ENST00000629667 BPY2O14599 106 aa6.86□□□□□ -1.31
PDLIM3-213ENST00000629667 KRTAP3-1Q9BYR8 98 aa6.86□□□□□ -1.31
PDLIM3-213ENST00000629667 CASC2Q6XLA1 102 aa6.85□□□□□ -1.31
PDLIM3-213ENST00000629667 CXCL6P80162 114 aa6.83□□□□□ -1.32
PDLIM3-213ENST00000629667 C1orf64Q8NEQ6 169 aa6.82□□□□□ -1.32
PDLIM3-213ENST00000629667 SPCS1Q9Y6A9 102 aa6.81□□□□□ -1.32
PDLIM3-213ENST00000629667 Q8N9L7 120 aa6.8□□□□□ -1.32
PDLIM3-213ENST00000629667 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
PDLIM3-213ENST00000629667 H3BT86 120 aa6.78□□□□□ -1.32
PDLIM3-213ENST00000629667 SPRR2EP22531 72 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms