RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 DNAH2Q9P225 4427 aa11.3□□□□□ -0.6
PTBP1-220ENST00000627714 A0A087X002 238 aa11.29□□□□□ -0.6
PTBP1-220ENST00000627714 NOTCH2NLQ7Z3S9 236 aa11.29□□□□□ -0.6
PTBP1-220ENST00000627714 LOC101927531A0A1B0GV80 90 aa11.29□□□□□ -0.6
PTBP1-220ENST00000627714 CIRBP-AS1Q8TBR5 109 aa11.28□□□□□ -0.6
PTBP1-220ENST00000627714 C8orf87E5RJ46 101 aa11.27□□□□□ -0.61
PTBP1-220ENST00000627714 SPINK6Q6UWN8 80 aa11.27□□□□□ -0.61
PTBP1-220ENST00000627714 PRR15LQ9BU68 103 aa11.25□□□□□ -0.61
PTBP1-220ENST00000627714 KMT2AQ03164 3969 aa11.24□□□□□ -0.61
PTBP1-220ENST00000627714 FBN3Q75N90 2809 aa11.24□□□□□ -0.61
PTBP1-220ENST00000627714 FRAS1Q86XX4 4008 aa11.24□□□□□ -0.61
PTBP1-220ENST00000627714 LY6G6CO95867 125 aa11.22□□□□□ -0.61
PTBP1-220ENST00000627714 CHKB-CPT1BH3BT56 60 aa11.21□□□□□ -0.61
PTBP1-220ENST00000627714 Q75L30 129 aa11.21□□□□□ -0.61
PTBP1-220ENST00000627714 KRTAP13-3Q3SY46 172 aa11.2□□□□□ -0.62
PTBP1-220ENST00000627714 MEGF8Q7Z7M0 2845 aa11.19□□□□□ -0.62
PTBP1-220ENST00000627714 HRES1P13985 223 aa11.17□□□□□ -0.62
PTBP1-220ENST00000627714 LINC01558Q9Y6Z2 57 aa11.17□□□□□ -0.62
PTBP1-220ENST00000627714 Q5W150 140 aa11.16□□□□□ -0.62
PTBP1-220ENST00000627714 TGP01266 2768 aa11.14□□□□□ -0.63
PTBP1-220ENST00000627714 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
PTBP1-220ENST00000627714 DNAH6Q9C0G6 4158 aa11.12□□□□□ -0.63
PTBP1-220ENST00000627714 LINC00313P59037 77 aa11.12□□□□□ -0.63
PTBP1-220ENST00000627714 SPAG11AQ6PDA7 123 aa11.11□□□□□ -0.63
PTBP1-220ENST00000627714 Q6ZSA8 131 aa11.11□□□□□ -0.63
PTBP1-220ENST00000627714 FAM229AH3BQW9 127 aa11.09□□□□□ -0.63
PTBP1-220ENST00000627714 ALMS1Q8TCU4 4167 aa11.09□□□□□ -0.63
PTBP1-220ENST00000627714 A6NED7 52 aa11.08□□□□□ -0.64
PTBP1-220ENST00000627714 KRTAP13-2Q52LG2 175 aa11.07□□□□□ -0.64
PTBP1-220ENST00000627714 ACYP2P14621 99 aa11.05□□□□□ -0.64
PTBP1-220ENST00000627714 DNAH11Q96DT5 4516 aa11.04□□□□□ -0.64
PTBP1-220ENST00000627714 PMAIP1Q13794 54 aa11.04□□□□□ -0.64
PTBP1-220ENST00000627714 A8MU10 97 aa11.03□□□□□ -0.64
PTBP1-220ENST00000627714 DNAH5Q8TE73 4624 aa11.02□□□□□ -0.65
PTBP1-220ENST00000627714 KRTAP10-1P60331 282 aa11.01□□□□□ -0.65
PTBP1-220ENST00000627714 ATP11AUNQ6ZP68 121 aa11.01□□□□□ -0.65
PTBP1-220ENST00000627714 CDC42SE1Q9NRR8 79 aa11.01□□□□□ -0.65
PTBP1-220ENST00000627714 LCA10Q71F78 164 aa11□□□□□ -0.65
PTBP1-220ENST00000627714 DMAC1Q96GE9 116 aa11□□□□□ -0.65
PTBP1-220ENST00000627714 KRTAP21-3Q3LHN1 58 aa10.99□□□□□ -0.65
PTBP1-220ENST00000627714 IGKV2-30P06310 120 aa10.97□□□□□ -0.65
PTBP1-220ENST00000627714 KRTAP1-4P0C5Y4 121 aa10.96□□□□□ -0.66
PTBP1-220ENST00000627714 KRTAP16-1A8MUX0 517 aa10.95□□□□□ -0.66
PTBP1-220ENST00000627714 PRR26Q8N8Z3 221 aa10.94□□□□□ -0.66
PTBP1-220ENST00000627714 SPTSSBQ8NFR3 76 aa10.91□□□□□ -0.66
PTBP1-220ENST00000627714 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
PTBP1-220ENST00000627714 PKD1P98161 4303 aa10.88□□□□□ -0.67
PTBP1-220ENST00000627714 RETNLBQ9BQ08 111 aa10.88□□□□□ -0.67
PTBP1-220ENST00000627714 SPINK1P00995 79 aa10.86□□□□□ -0.67
PTBP1-220ENST00000627714 SPINK7P58062 85 aa10.86□□□□□ -0.67
PTBP1-220ENST00000627714 DNHD1Q96M86 4753 aa10.86□□□□□ -0.67
PTBP1-220ENST00000627714 LRP1BQ9NZR2 4599 aa10.85□□□□□ -0.67
PTBP1-220ENST00000627714 PLA2G1BP04054 148 aaKnown RBP10.85□□□□□ -0.67
PTBP1-220ENST00000627714 TYMSOSQ8TAI1 123 aa10.84□□□□□ -0.67
PTBP1-220ENST00000627714 FAT2Q9NYQ8 4349 aa10.81□□□□□ -0.68
PTBP1-220ENST00000627714 A6NN06 94 aa10.8□□□□□ -0.68
PTBP1-220ENST00000627714 KTN1-AS1Q86SY8 53 aa10.8□□□□□ -0.68
PTBP1-220ENST00000627714 RPS29P62273 56 aaKnown RBP10.77□□□□□ -0.68
PTBP1-220ENST00000627714 IGKV2D-30A0A075B6S6 120 aa10.76□□□□□ -0.69
PTBP1-220ENST00000627714 A0A1B0GU69 56 aa10.74□□□□□ -0.69
PTBP1-220ENST00000627714 VPS13BQ7Z7G8 4022 aa10.73□□□□□ -0.69
PTBP1-220ENST00000627714 SEC61GP60059 68 aa10.73□□□□□ -0.69
PTBP1-220ENST00000627714 HYDINQ4G0P3 5121 aa10.71□□□□□ -0.7
PTBP1-220ENST00000627714 C7orf65Q6ZTY9 151 aa10.7□□□□□ -0.7
PTBP1-220ENST00000627714 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
PTBP1-220ENST00000627714 SPATA8Q6RVD6 105 aa10.6□□□□□ -0.71
PTBP1-220ENST00000627714 UQCR11O14957 56 aa10.58□□□□□ -0.72
PTBP1-220ENST00000627714 SACSQ9NZJ4 4579 aa10.53□□□□□ -0.72
PTBP1-220ENST00000627714 MIR22HGQ0VDD5 57 aa10.53□□□□□ -0.72
PTBP1-220ENST00000627714 C20orf166-AS1Q96NR2 134 aa10.5□□□□□ -0.73
PTBP1-220ENST00000627714 A8MUU9 505 aa10.49□□□□□ -0.73
PTBP1-220ENST00000627714 Q8N1X5 172 aa10.48□□□□□ -0.73
PTBP1-220ENST00000627714 RBM12B-AS1Q9P1G2 102 aa10.48□□□□□ -0.73
PTBP1-220ENST00000627714 PKHD1P08F94 4074 aa10.47□□□□□ -0.73
PTBP1-220ENST00000627714 SMR3BP02814 79 aaPredicted RBP10.46□□□□□ -0.73
PTBP1-220ENST00000627714 A0A1B0GVY2 172 aa10.42□□□□□ -0.74
PTBP1-220ENST00000627714 KRTAP10-4P60372 401 aaPredicted RBP10.41□□□□□ -0.74
PTBP1-220ENST00000627714 C9orf92A6NGG3 77 aa10.41□□□□□ -0.74
PTBP1-220ENST00000627714 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
PTBP1-220ENST00000627714 DYNC1H1Q14204 4646 aaKnown RBP10.37□□□□□ -0.75
PTBP1-220ENST00000627714 APOBP04114 4563 aaKnown RBP10.32□□□□□ -0.76
PTBP1-220ENST00000627714 KRTAP3-1Q9BYR8 98 aa10.26□□□□□ -0.77
PTBP1-220ENST00000627714 FAT1Q14517 4588 aa10.22□□□□□ -0.77
PTBP1-220ENST00000627714 PRAC1Q96KF2 57 aa10.2□□□□□ -0.78
PTBP1-220ENST00000627714 COX6B2Q6YFQ2 88 aa10.18□□□□□ -0.78
PTBP1-220ENST00000627714 ADM2Q7Z4H4 148 aa10.17□□□□□ -0.78
PTBP1-220ENST00000627714 A0A1B0GU33 70 aa10.15□□□□□ -0.78
PTBP1-220ENST00000627714 H0YAA0 97 aa10.14□□□□□ -0.79
PTBP1-220ENST00000627714 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
PTBP1-220ENST00000627714 H1FX-AS1Q4G0G2 97 aa10.11□□□□□ -0.79
PTBP1-220ENST00000627714 RYR2Q92736 4967 aa10.06□□□□□ -0.8
PTBP1-220ENST00000627714 KRTAP10-8P60410 259 aa10.05□□□□□ -0.8
PTBP1-220ENST00000627714 RPL37P61927 97 aaKnown RBP9.99□□□□□ -0.81
PTBP1-220ENST00000627714 LINC01554Q52M75 96 aa9.99□□□□□ -0.81
PTBP1-220ENST00000627714 FAT3Q8TDW7 4589 aa9.97□□□□□ -0.81
PTBP1-220ENST00000627714 CSAG1Q6PB30 78 aa9.95□□□□□ -0.82
PTBP1-220ENST00000627714 Q5VSD8 79 aa9.95□□□□□ -0.82
PTBP1-220ENST00000627714 TNXBP22105 4242 aa9.94□□□□□ -0.82
PTBP1-220ENST00000627714 K7ERS5 55 aa9.9□□□□□ -0.82
PTBP1-220ENST00000627714 XP32Q5T750 250 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms