RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 C9JAW5 83 aa12.85□□□□□ -0.35
TCF4-259ENST00000627568 HRES1P13985 223 aa12.85□□□□□ -0.35
TCF4-259ENST00000627568 J3KT08 172 aa12.84□□□□□ -0.35
TCF4-259ENST00000627568 BAALC-AS2P0C853 105 aa12.84□□□□□ -0.35
TCF4-259ENST00000627568 MPLKIPQ8TAP9 179 aa12.83□□□□□ -0.36
TCF4-259ENST00000627568 Q6ZQT0 140 aa12.77□□□□□ -0.37
TCF4-259ENST00000627568 NDUFB1O75438 58 aa12.76□□□□□ -0.37
TCF4-259ENST00000627568 ZCCHC13Q8WW36 166 aaKnown RBP12.76□□□□□ -0.37
TCF4-259ENST00000627568 USH2AO75445 5202 aa12.74□□□□□ -0.37
TCF4-259ENST00000627568 MTURNQ8N3F0 131 aa12.74□□□□□ -0.37
TCF4-259ENST00000627568 ATXN8Q156A1 80 aa12.73□□□□□ -0.37
TCF4-259ENST00000627568 JMJD7-PLA2G4BH0Y9G9 81 aa12.72□□□□□ -0.37
TCF4-259ENST00000627568 M0R143 59 aa12.72□□□□□ -0.37
TCF4-259ENST00000627568 MT2AP02795 61 aa12.72□□□□□ -0.37
TCF4-259ENST00000627568 A0A1B0GW54 56 aa12.67□□□□□ -0.38
TCF4-259ENST00000627568 NAA38Q9BRA0 125 aaKnown RBP12.67□□□□□ -0.38
TCF4-259ENST00000627568 SSPOA2VEC9 5147 aa12.66□□□□□ -0.38
TCF4-259ENST00000627568 SPINK7P58062 85 aa12.66□□□□□ -0.38
TCF4-259ENST00000627568 LOC110117498A0A087WWA1 95 aa12.65□□□□□ -0.38
TCF4-259ENST00000627568 PDE6GP18545 87 aa12.65□□□□□ -0.38
TCF4-259ENST00000627568 Q8N9P0 234 aaPredicted RBP12.65□□□□□ -0.38
TCF4-259ENST00000627568 A8MWP4 228 aa12.64□□□□□ -0.39
TCF4-259ENST00000627568 LYRM7Q5U5X0 104 aa12.63□□□□□ -0.39
TCF4-259ENST00000627568 C8orf17Q9NRJ1 99 aa12.63□□□□□ -0.39
TCF4-259ENST00000627568 MT1FP04733 61 aa12.62□□□□□ -0.39
TCF4-259ENST00000627568 KRTAP10-10P60014 251 aa12.61□□□□□ -0.39
TCF4-259ENST00000627568 C14orf132Q9NPU4 83 aa12.58□□□□□ -0.4
TCF4-259ENST00000627568 IGKV3D-7A0A0C4DH55 119 aa12.56□□□□□ -0.4
TCF4-259ENST00000627568 Q6ZVQ6 151 aa12.54□□□□□ -0.4
TCF4-259ENST00000627568 WFDC13Q8IUB5 93 aa12.53□□□□□ -0.4
TCF4-259ENST00000627568 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.51□□□□□ -0.41
TCF4-259ENST00000627568 NREPQ16612 68 aa12.51□□□□□ -0.41
TCF4-259ENST00000627568 PRR15Q8IV56 129 aa12.5□□□□□ -0.41
TCF4-259ENST00000627568 KRTAP9-3Q9BYQ3 159 aa12.5□□□□□ -0.41
TCF4-259ENST00000627568 LCE2BO14633 110 aa12.48□□□□□ -0.41
TCF4-259ENST00000627568 SMIM6P0DI80 62 aa12.47□□□□□ -0.41
TCF4-259ENST00000627568 KRTAP9-7A8MTY7 169 aa12.42□□□□□ -0.42
TCF4-259ENST00000627568 BATFQ16520 125 aa12.42□□□□□ -0.42
TCF4-259ENST00000627568 TMEM254Q8TBM7 123 aa12.42□□□□□ -0.42
TCF4-259ENST00000627568 MRPL34Q9BQ48 92 aaKnown RBP12.42□□□□□ -0.42
TCF4-259ENST00000627568 MMP24-AS1A0A0U1RRL7 71 aa12.4□□□□□ -0.42
TCF4-259ENST00000627568 FCGBPQ9Y6R7 5405 aaPredicted RBP12.4□□□□□ -0.42
TCF4-259ENST00000627568 TSTD3H0UI37 97 aa12.39□□□□□ -0.43
TCF4-259ENST00000627568 KRTAP19-1Q8IUB9 90 aa12.37□□□□□ -0.43
TCF4-259ENST00000627568 hDV103S1A0JD37 113 aa12.36□□□□□ -0.43
TCF4-259ENST00000627568 NDUFS5O43920 106 aa12.36□□□□□ -0.43
TCF4-259ENST00000627568 H3BT86 120 aa12.35□□□□□ -0.43
TCF4-259ENST00000627568 K7EQZ3 153 aa12.34□□□□□ -0.43
TCF4-259ENST00000627568 C9orf118A6NHY6 69 aa12.28□□□□□ -0.44
TCF4-259ENST00000627568 BPY2O14599 106 aa12.27□□□□□ -0.45
TCF4-259ENST00000627568 A0A1W2PPM0 123 aa12.24□□□□□ -0.45
TCF4-259ENST00000627568 H1FX-AS1Q4G0G2 97 aa12.24□□□□□ -0.45
TCF4-259ENST00000627568 LINC00846Q9NV44 126 aa12.23□□□□□ -0.45
TCF4-259ENST00000627568 IGKV2D-30A0A075B6S6 120 aa12.21□□□□□ -0.45
TCF4-259ENST00000627568 IGKV2-30P06310 120 aa12.21□□□□□ -0.45
TCF4-259ENST00000627568 TAX1BP3O14907 124 aa12.2□□□□□ -0.46
TCF4-259ENST00000627568 C7orf65Q6ZTY9 151 aa12.19□□□□□ -0.46
TCF4-259ENST00000627568 CASC2Q6XLA1 102 aa12.13□□□□□ -0.47
TCF4-259ENST00000627568 Q5W150 140 aa12.12□□□□□ -0.47
TCF4-259ENST00000627568 Q8N9L7 120 aa12.12□□□□□ -0.47
TCF4-259ENST00000627568 KRTAP19-6Q3LI70 58 aa12.1□□□□□ -0.47
TCF4-259ENST00000627568 HCG22E2RYF7 251 aa12.09□□□□□ -0.47
TCF4-259ENST00000627568 SPCS1Q9Y6A9 102 aa12.08□□□□□ -0.48
TCF4-259ENST00000627568 MACF1Q9UPN3 7388 aaKnown RBP12.03□□□□□ -0.48
TCF4-259ENST00000627568 CXCL6P80162 114 aa12.02□□□□□ -0.49
TCF4-259ENST00000627568 C4orf26Q17RF5 130 aa11.99□□□□□ -0.49
TCF4-259ENST00000627568 UBL5Q9BZL1 73 aa11.98□□□□□ -0.49
TCF4-259ENST00000627568 LOC105371267A0A1B0GV96 52 aa11.97□□□□□ -0.49
TCF4-259ENST00000627568 SMCPP49901 116 aaPredicted RBP11.96□□□□□ -0.49
TCF4-259ENST00000627568 SYNE2Q8WXH0 6885 aaKnown RBP11.96□□□□□ -0.5
TCF4-259ENST00000627568 COL5A1-AS1Q5SY13 56 aa11.86□□□□□ -0.51
TCF4-259ENST00000627568 C5orf47Q569G3 176 aa11.84□□□□□ -0.51
TCF4-259ENST00000627568 PRO0461Q9UI25 63 aa11.84□□□□□ -0.51
TCF4-259ENST00000627568 K7EP34 96 aa11.81□□□□□ -0.52
TCF4-259ENST00000627568 FAM236AA0A1B0GUQ0 79 aa11.8□□□□□ -0.52
TCF4-259ENST00000627568 FAM236BA0A1B0GV22 79 aa11.8□□□□□ -0.52
TCF4-259ENST00000627568 S4R3F8 94 aa11.79□□□□□ -0.52
TCF4-259ENST00000627568 C1orf64Q8NEQ6 169 aa11.75□□□□□ -0.53
TCF4-259ENST00000627568 TP53AIP1Q9HCN2 124 aa11.75□□□□□ -0.53
TCF4-259ENST00000627568 KRTAP3-1Q9BYR8 98 aa11.74□□□□□ -0.53
TCF4-259ENST00000627568 CSAG1Q6PB30 78 aa11.72□□□□□ -0.53
TCF4-259ENST00000627568 LCA10Q71F78 164 aa11.67□□□□□ -0.54
TCF4-259ENST00000627568 GTF2H5Q6ZYL4 71 aa11.66□□□□□ -0.54
TCF4-259ENST00000627568 KRTAP6-3Q3LI67 103 aa11.64□□□□□ -0.55
TCF4-259ENST00000627568 F8W1H4 67 aa11.59□□□□□ -0.55
TCF4-259ENST00000627568 Q5VV11 94 aa11.58□□□□□ -0.56
TCF4-259ENST00000627568 ETDBQ3ZM63 59 aa11.57□□□□□ -0.56
TCF4-259ENST00000627568 A6NN06 94 aa11.55□□□□□ -0.56
TCF4-259ENST00000627568 SPRR2GQ9BYE4 73 aa11.54□□□□□ -0.56
TCF4-259ENST00000627568 MT1BP07438 61 aa11.52□□□□□ -0.57
TCF4-259ENST00000627568 CYP4F30PQ9H0H9 118 aa11.51□□□□□ -0.57
TCF4-259ENST00000627568 KLKP1Q107X0 134 aa11.49□□□□□ -0.57
TCF4-259ENST00000627568 KRTAP19-8Q3LI54 63 aa11.49□□□□□ -0.57
TCF4-259ENST00000627568 TRAV22A0A0B4J277 110 aa11.47□□□□□ -0.57
TCF4-259ENST00000627568 LOC101927531A0A1B0GV80 90 aa11.45□□□□□ -0.58
TCF4-259ENST00000627568 KRTAP3-3Q9BYR6 98 aa11.43□□□□□ -0.58
TCF4-259ENST00000627568 PCP4L1A6NKN8 68 aa11.38□□□□□ -0.59
TCF4-259ENST00000627568 ACYP1P07311 99 aa11.37□□□□□ -0.59
TCF4-259ENST00000627568 ATP5EP2Q5VTU8 51 aa11.34□□□□□ -0.59
TCF4-259ENST00000627568 A0A087WVE0 104 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms