RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
SGMS1-211ENST00000626236 A0A087WSZ3 146 aa4.85□□□□□ -1.63
SGMS1-211ENST00000626236 PDE6GP18545 87 aa4.85□□□□□ -1.63
SGMS1-211ENST00000626236 ETDBQ3ZM63 59 aa4.85□□□□□ -1.63
SGMS1-211ENST00000626236 Q5XG85 94 aa4.83□□□□□ -1.64
SGMS1-211ENST00000626236 SS18L2Q9UHA2 77 aa4.83□□□□□ -1.64
SGMS1-211ENST00000626236 PRR4Q16378 134 aa4.82□□□□□ -1.64
SGMS1-211ENST00000626236 ASB16-AS1Q495Z4 193 aa4.81□□□□□ -1.64
SGMS1-211ENST00000626236 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
SGMS1-211ENST00000626236 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
SGMS1-211ENST00000626236 C1orf195Q5TG92 126 aa4.8□□□□□ -1.64
SGMS1-211ENST00000626236 A0A1B0GW54 56 aa4.79□□□□□ -1.64
SGMS1-211ENST00000626236 FP248Q71RG6 208 aaPredicted RBP4.78□□□□□ -1.64
SGMS1-211ENST00000626236 IGLV7-46A0A075B6I9 117 aa4.77□□□□□ -1.65
SGMS1-211ENST00000626236 Q96NJ1 140 aa4.77□□□□□ -1.65
SGMS1-211ENST00000626236 NREPQ16612 68 aa4.76□□□□□ -1.65
SGMS1-211ENST00000626236 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
SGMS1-211ENST00000626236 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
SGMS1-211ENST00000626236 SIGMAR1Q99720 223 aa4.75□□□□□ -1.65
SGMS1-211ENST00000626236 LINC00472Q9H8W2 130 aa4.75□□□□□ -1.65
SGMS1-211ENST00000626236 LPAP08519 4548 aa4.74□□□□□ -1.65
SGMS1-211ENST00000626236 IGKV4-1P06312 121 aa4.74□□□□□ -1.65
SGMS1-211ENST00000626236 LINC00846Q9NV44 126 aa4.73□□□□□ -1.65
SGMS1-211ENST00000626236 Q6ZVQ6 151 aa4.72□□□□□ -1.65
SGMS1-211ENST00000626236 UBL5Q9BZL1 73 aa4.72□□□□□ -1.65
SGMS1-211ENST00000626236 C9orf92A6NGG3 77 aa4.71□□□□□ -1.66
SGMS1-211ENST00000626236 J3KT08 172 aa4.71□□□□□ -1.66
SGMS1-211ENST00000626236 ACYP1P07311 99 aa4.71□□□□□ -1.66
SGMS1-211ENST00000626236 TPRXLQ17RH7 258 aa4.71□□□□□ -1.66
SGMS1-211ENST00000626236 KRTAP13-3Q3SY46 172 aa4.71□□□□□ -1.66
SGMS1-211ENST00000626236 FAM240AA0A1B0GVK7 77 aa4.7□□□□□ -1.66
SGMS1-211ENST00000626236 BPY2O14599 106 aa4.7□□□□□ -1.66
SGMS1-211ENST00000626236 IGHV6-1A0A0B4J1U7 121 aa4.69□□□□□ -1.66
SGMS1-211ENST00000626236 J3QR89 54 aa4.69□□□□□ -1.66
SGMS1-211ENST00000626236 A0A1B0GVX0 72 aa4.68□□□□□ -1.66
SGMS1-211ENST00000626236 A8MWP4 228 aa4.68□□□□□ -1.66
SGMS1-211ENST00000626236 NDUFB1O75438 58 aa4.68□□□□□ -1.66
SGMS1-211ENST00000626236 DSCR10P59022 87 aa4.68□□□□□ -1.66
SGMS1-211ENST00000626236 LRP2P98164 4655 aa4.68□□□□□ -1.66
SGMS1-211ENST00000626236 IGKV3D-7A0A0C4DH55 119 aa4.66□□□□□ -1.66
SGMS1-211ENST00000626236 K7EQZ3 153 aa4.66□□□□□ -1.66
SGMS1-211ENST00000626236 LINC00313P59037 77 aa4.66□□□□□ -1.66
SGMS1-211ENST00000626236 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.67
SGMS1-211ENST00000626236 C8orf87E5RJ46 101 aa4.64□□□□□ -1.67
SGMS1-211ENST00000626236 PRR15Q8IV56 129 aa4.64□□□□□ -1.67
SGMS1-211ENST00000626236 Q8N9L7 120 aa4.64□□□□□ -1.67
SGMS1-211ENST00000626236 K7ERU9 68 aa4.63□□□□□ -1.67
SGMS1-211ENST00000626236 CXCL6P80162 114 aa4.63□□□□□ -1.67
SGMS1-211ENST00000626236 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
SGMS1-211ENST00000626236 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
SGMS1-211ENST00000626236 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
SGMS1-211ENST00000626236 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
SGMS1-211ENST00000626236 ATP5EP2Q5VTU8 51 aa4.61□□□□□ -1.67
SGMS1-211ENST00000626236 LINC00643Q86TS7 51 aa4.61□□□□□ -1.67
SGMS1-211ENST00000626236 MUC17Q685J3 4493 aa4.6□□□□□ -1.67
SGMS1-211ENST00000626236 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.67
SGMS1-211ENST00000626236 hDV103S1A0JD37 113 aa4.58□□□□□ -1.68
SGMS1-211ENST00000626236 Q75L30 129 aa4.58□□□□□ -1.68
SGMS1-211ENST00000626236 WFDC13Q8IUB5 93 aa4.58□□□□□ -1.68
SGMS1-211ENST00000626236 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
SGMS1-211ENST00000626236 A8MUU9 505 aa4.57□□□□□ -1.68
SGMS1-211ENST00000626236 HCG22E2RYF7 251 aa4.57□□□□□ -1.68
SGMS1-211ENST00000626236 SEC61BP60468 96 aaKnown RBP4.57□□□□□ -1.68
SGMS1-211ENST00000626236 HIST1H4AP62805 103 aaKnown RBP4.57□□□□□ -1.68
SGMS1-211ENST00000626236 CASC2Q6XLA1 102 aa4.57□□□□□ -1.68
SGMS1-211ENST00000626236 TMEM254Q8TBM7 123 aa4.57□□□□□ -1.68
SGMS1-211ENST00000626236 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
SGMS1-211ENST00000626236 MRPL34Q9BQ48 92 aaKnown RBP4.56□□□□□ -1.68
SGMS1-211ENST00000626236 PCOTHQ58A44 107 aa4.55□□□□□ -1.68
SGMS1-211ENST00000626236 ATP11AUNQ6ZP68 121 aa4.55□□□□□ -1.68
SGMS1-211ENST00000626236 NDUFS5O43920 106 aa4.54□□□□□ -1.68
SGMS1-211ENST00000626236 Q8N9P0 234 aaPredicted RBP4.54□□□□□ -1.68
SGMS1-211ENST00000626236 A0A087WVE0 104 aa4.53□□□□□ -1.68
SGMS1-211ENST00000626236 MT-ATP8P03928 68 aa4.51□□□□□ -1.69
SGMS1-211ENST00000626236 ZCCHC13Q8WW36 166 aaKnown RBP4.5□□□□□ -1.69
SGMS1-211ENST00000626236 MUC2Q02817 5179 aa4.5□□□□□ -1.69
SGMS1-211ENST00000626236 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
SGMS1-211ENST00000626236 KRTAP4-1Q9BYQ7 146 aa4.47□□□□□ -1.69
SGMS1-211ENST00000626236 IMUPQ9GZP8 106 aa4.47□□□□□ -1.69
SGMS1-211ENST00000626236 Q5W150 140 aa4.45□□□□□ -1.7
SGMS1-211ENST00000626236 TP53AIP1Q9HCN2 124 aa4.45□□□□□ -1.7
SGMS1-211ENST00000626236 SCGB1A1P11684 91 aa4.43□□□□□ -1.7
SGMS1-211ENST00000626236 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
SGMS1-211ENST00000626236 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
SGMS1-211ENST00000626236 SPINK7P58062 85 aa4.41□□□□□ -1.7
SGMS1-211ENST00000626236 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
SGMS1-211ENST00000626236 TRAV22A0A0B4J277 110 aa4.4□□□□□ -1.71
SGMS1-211ENST00000626236 UQCRQO14949 82 aa4.4□□□□□ -1.71
SGMS1-211ENST00000626236 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
SGMS1-211ENST00000626236 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
SGMS1-211ENST00000626236 PCP4P48539 62 aa4.39□□□□□ -1.71
SGMS1-211ENST00000626236 OCR1Q9BZK8 76 aa4.39□□□□□ -1.71
SGMS1-211ENST00000626236 C7orf65Q6ZTY9 151 aa4.38□□□□□ -1.71
SGMS1-211ENST00000626236 H0Y9P7 68 aa4.37□□□□□ -1.71
SGMS1-211ENST00000626236 A0A0U1RQV1 116 aa4.36□□□□□ -1.71
SGMS1-211ENST00000626236 HRES1P13985 223 aa4.36□□□□□ -1.71
SGMS1-211ENST00000626236 ATOX1O00244 68 aa4.35□□□□□ -1.71
SGMS1-211ENST00000626236 SMIM20Q8N5G0 67 aa4.35□□□□□ -1.71
SGMS1-211ENST00000626236 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.71
SGMS1-211ENST00000626236 LOC101927531A0A1B0GV80 90 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms