RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 A0A1B0GVX0 72 aa11.56□□□□□ -0.56
SF1-220ENST00000626028 BATFQ16520 125 aa11.54□□□□□ -0.56
SF1-220ENST00000626028 LCE2DQ5TA82 110 aaPredicted RBP11.54□□□□□ -0.56
SF1-220ENST00000626028 NOTCH2NLQ7Z3S9 236 aa11.53□□□□□ -0.56
SF1-220ENST00000626028 FLGP20930 4061 aaPredicted RBP11.52□□□□□ -0.57
SF1-220ENST00000626028 M0R2T5 61 aa11.51□□□□□ -0.57
SF1-220ENST00000626028 C9orf118A6NHY6 69 aa11.5□□□□□ -0.57
SF1-220ENST00000626028 NDUFB1O75438 58 aa11.48□□□□□ -0.57
SF1-220ENST00000626028 LORP23490 312 aaPredicted RBP11.48□□□□□ -0.57
SF1-220ENST00000626028 KRTAP10-6P60371 365 aaPredicted RBP11.47□□□□□ -0.57
SF1-220ENST00000626028 C14orf132Q9NPU4 83 aa11.46□□□□□ -0.57
SF1-220ENST00000626028 H3BT86 120 aa11.45□□□□□ -0.58
SF1-220ENST00000626028 A0A1W2PPM0 123 aa11.44□□□□□ -0.58
SF1-220ENST00000626028 TAX1BP3O14907 124 aa11.43□□□□□ -0.58
SF1-220ENST00000626028 A8MWP4 228 aa11.42□□□□□ -0.58
SF1-220ENST00000626028 NREPQ16612 68 aa11.37□□□□□ -0.59
SF1-220ENST00000626028 Q8N9P0 234 aaPredicted RBP11.36□□□□□ -0.59
SF1-220ENST00000626028 KRTAP9-6A0A140TA67 174 aa11.34□□□□□ -0.59
SF1-220ENST00000626028 ZCCHC13Q8WW36 166 aaKnown RBP11.33□□□□□ -0.6
SF1-220ENST00000626028 C8orf17Q9NRJ1 99 aa11.33□□□□□ -0.6
SF1-220ENST00000626028 IGKV3D-7A0A0C4DH55 119 aa11.32□□□□□ -0.6
SF1-220ENST00000626028 MPLKIPQ8TAP9 179 aa11.32□□□□□ -0.6
SF1-220ENST00000626028 RBM12B-AS1Q9P1G2 102 aa11.32□□□□□ -0.6
SF1-220ENST00000626028 PRR15Q8IV56 129 aa11.3□□□□□ -0.6
SF1-220ENST00000626028 HRES1P13985 223 aa11.28□□□□□ -0.6
SF1-220ENST00000626028 Q6ZVQ6 151 aa11.26□□□□□ -0.61
SF1-220ENST00000626028 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
SF1-220ENST00000626028 FAM236DA0A1B0GTK5 79 aa11.25□□□□□ -0.61
SF1-220ENST00000626028 FAM236CP0DP71 79 aa11.25□□□□□ -0.61
SF1-220ENST00000626028 COL5A1-AS1Q5SY13 56 aa11.25□□□□□ -0.61
SF1-220ENST00000626028 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
SF1-220ENST00000626028 SPINK7P58062 85 aa11.2□□□□□ -0.62
SF1-220ENST00000626028 TMEM254Q8TBM7 123 aa11.19□□□□□ -0.62
SF1-220ENST00000626028 FSIP2Q5CZC0 6907 aa11.18□□□□□ -0.62
SF1-220ENST00000626028 MMP24-AS1A0A0U1RRL7 71 aa11.17□□□□□ -0.62
SF1-220ENST00000626028 MRPL34Q9BQ48 92 aaKnown RBP11.17□□□□□ -0.62
SF1-220ENST00000626028 BPY2O14599 106 aa11.16□□□□□ -0.62
SF1-220ENST00000626028 K7EQZ3 153 aa11.15□□□□□ -0.62
SF1-220ENST00000626028 CRCT1Q9UGL9 99 aa11.15□□□□□ -0.62
SF1-220ENST00000626028 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
SF1-220ENST00000626028 hDV103S1A0JD37 113 aa11.13□□□□□ -0.63
SF1-220ENST00000626028 K7EP34 96 aa11.1□□□□□ -0.63
SF1-220ENST00000626028 KRTAP9-8Q9BYQ0 159 aa11.1□□□□□ -0.63
SF1-220ENST00000626028 PRO0461Q9UI25 63 aa11.09□□□□□ -0.63
SF1-220ENST00000626028 GTF2H5Q6ZYL4 71 aa11.03□□□□□ -0.64
SF1-220ENST00000626028 NDUFS5O43920 106 aa11.02□□□□□ -0.65
SF1-220ENST00000626028 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.65
SF1-220ENST00000626028 UBL5Q9BZL1 73 aa11.02□□□□□ -0.65
SF1-220ENST00000626028 CASC2Q6XLA1 102 aa10.98□□□□□ -0.65
SF1-220ENST00000626028 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
SF1-220ENST00000626028 F8W1H4 67 aa10.97□□□□□ -0.65
SF1-220ENST00000626028 Q8N9L7 120 aa10.95□□□□□ -0.66
SF1-220ENST00000626028 MT2AP02795 61 aa10.93□□□□□ -0.66
SF1-220ENST00000626028 CXCL6P80162 114 aa10.9□□□□□ -0.66
SF1-220ENST00000626028 PCP4L1A6NKN8 68 aa10.89□□□□□ -0.67
SF1-220ENST00000626028 C7orf65Q6ZTY9 151 aa10.89□□□□□ -0.67
SF1-220ENST00000626028 HCG22E2RYF7 251 aa10.88□□□□□ -0.67
SF1-220ENST00000626028 Q5W150 140 aa10.87□□□□□ -0.67
SF1-220ENST00000626028 IGKV2D-30A0A075B6S6 120 aa10.83□□□□□ -0.68
SF1-220ENST00000626028 MT1FP04733 61 aa10.83□□□□□ -0.68
SF1-220ENST00000626028 IGKV2-30P06310 120 aa10.83□□□□□ -0.68
SF1-220ENST00000626028 ETDBQ3ZM63 59 aa10.83□□□□□ -0.68
SF1-220ENST00000626028 KRTAP10-10P60014 251 aa10.82□□□□□ -0.68
SF1-220ENST00000626028 H1FX-AS1Q4G0G2 97 aa10.82□□□□□ -0.68
SF1-220ENST00000626028 KRTAP9-3Q9BYQ3 159 aa10.75□□□□□ -0.69
SF1-220ENST00000626028 TP53AIP1Q9HCN2 124 aa10.75□□□□□ -0.69
SF1-220ENST00000626028 ACYP1P07311 99 aa10.7□□□□□ -0.7
SF1-220ENST00000626028 USH2AO75445 5202 aa10.68□□□□□ -0.7
SF1-220ENST00000626028 FAM240AA0A1B0GVK7 77 aa10.65□□□□□ -0.7
SF1-220ENST00000626028 C4orf26Q17RF5 130 aa10.65□□□□□ -0.7
SF1-220ENST00000626028 LCE2BO14633 110 aa10.64□□□□□ -0.71
SF1-220ENST00000626028 ATP5EP2Q5VTU8 51 aa10.59□□□□□ -0.71
SF1-220ENST00000626028 SSPOA2VEC9 5147 aa10.52□□□□□ -0.72
SF1-220ENST00000626028 C1orf64Q8NEQ6 169 aa10.49□□□□□ -0.73
SF1-220ENST00000626028 KRTAP3-1Q9BYR8 98 aa10.48□□□□□ -0.73
SF1-220ENST00000626028 TRAV22A0A0B4J277 110 aa10.47□□□□□ -0.73
SF1-220ENST00000626028 KRTAP19-1Q8IUB9 90 aa10.44□□□□□ -0.74
SF1-220ENST00000626028 CYP4F30PQ9H0H9 118 aa10.44□□□□□ -0.74
SF1-220ENST00000626028 S4R3F8 94 aa10.44□□□□□ -0.74
SF1-220ENST00000626028 LOC101927531A0A1B0GV80 90 aa10.43□□□□□ -0.74
SF1-220ENST00000626028 HIST1H4AP62805 103 aaKnown RBP10.42□□□□□ -0.74
SF1-220ENST00000626028 LINC00643Q86TS7 51 aa10.4□□□□□ -0.74
SF1-220ENST00000626028 C5orf47Q569G3 176 aa10.39□□□□□ -0.75
SF1-220ENST00000626028 CSAG1Q6PB30 78 aa10.39□□□□□ -0.75
SF1-220ENST00000626028 UQCRQO14949 82 aa10.38□□□□□ -0.75
SF1-220ENST00000626028 FCGBPQ9Y6R7 5405 aaPredicted RBP10.37□□□□□ -0.75
SF1-220ENST00000626028 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.36□□□□□ -0.75
SF1-220ENST00000626028 ATOX1O00244 68 aa10.36□□□□□ -0.75
SF1-220ENST00000626028 LCA10Q71F78 164 aa10.35□□□□□ -0.75
SF1-220ENST00000626028 KRTAP19-6Q3LI70 58 aa10.33□□□□□ -0.76
SF1-220ENST00000626028 A0A1B0GV90 55 aa10.3□□□□□ -0.76
SF1-220ENST00000626028 H0Y9P7 68 aa10.27□□□□□ -0.77
SF1-220ENST00000626028 FAM236AA0A1B0GUQ0 79 aa10.26□□□□□ -0.77
SF1-220ENST00000626028 FAM236BA0A1B0GV22 79 aa10.26□□□□□ -0.77
SF1-220ENST00000626028 A0A087WVE0 104 aa10.24□□□□□ -0.77
SF1-220ENST00000626028 J3QR89 54 aa10.22□□□□□ -0.77
SF1-220ENST00000626028 KRTAP9-7A8MTY7 169 aa10.21□□□□□ -0.77
SF1-220ENST00000626028 KRTAP3-3Q9BYR6 98 aa10.2□□□□□ -0.78
SF1-220ENST00000626028 A8MUN3 132 aa10.15□□□□□ -0.78
SF1-220ENST00000626028 OCR1Q9BZK8 76 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms