RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	NDUFV3	P56181	108 aa	Known RBP	3.79	□□□□□ -1.8
LINC02028-223	ENST00000625668	NAA38	Q9BRA0	125 aa	Known RBP	3.79	□□□□□ -1.8
LINC02028-223	ENST00000625668	ORMDL1	Q9P0S3	153 aa		3.79	□□□□□ -1.8
LINC02028-223	ENST00000625668	SCGB1C2	P0DMR2	95 aa		3.78	□□□□□ -1.8
LINC02028-223	ENST00000625668	KRTAP13-3	Q3SY46	172 aa		3.78	□□□□□ -1.8
LINC02028-223	ENST00000625668		Q5XG85	94 aa		3.78	□□□□□ -1.8
LINC02028-223	ENST00000625668	TRBV7-7	A0A0K0K1E9	115 aa		3.77	□□□□□ -1.81
LINC02028-223	ENST00000625668		A0A1B0GV72	72 aa		3.77	□□□□□ -1.81
LINC02028-223	ENST00000625668		H3BMG7	143 aa		3.77	□□□□□ -1.81
LINC02028-223	ENST00000625668	TRAC	P01848	142 aa		3.77	□□□□□ -1.81
LINC02028-223	ENST00000625668	TCL1B	O95988	128 aa		3.76	□□□□□ -1.81
LINC02028-223	ENST00000625668	PCP4	P48539	62 aa		3.76	□□□□□ -1.81
LINC02028-223	ENST00000625668	C1orf195	Q5TG92	126 aa		3.76	□□□□□ -1.81
LINC02028-223	ENST00000625668		H3BQ85	93 aa		3.75	□□□□□ -1.81
LINC02028-223	ENST00000625668	TMEM256-PLSCR3	K7ERE1	68 aa		3.75	□□□□□ -1.81
LINC02028-223	ENST00000625668	ATXN8	Q156A1	80 aa		3.75	□□□□□ -1.81
LINC02028-223	ENST00000625668		Q6Q795	121 aa		3.74	□□□□□ -1.81
LINC02028-223	ENST00000625668		A0A087WSZ3	146 aa		3.73	□□□□□ -1.81
LINC02028-223	ENST00000625668		A0A1W2PNM2	257 aa		3.73	□□□□□ -1.81
LINC02028-223	ENST00000625668	C9orf92	A6NGG3	77 aa		3.73	□□□□□ -1.81
LINC02028-223	ENST00000625668	TAX1BP3	O14907	124 aa		3.73	□□□□□ -1.81
LINC02028-223	ENST00000625668	UBE2V1	Q13404	147 aa		3.73	□□□□□ -1.81
LINC02028-223	ENST00000625668	ASB16-AS1	Q495Z4	193 aa		3.73	□□□□□ -1.81
LINC02028-223	ENST00000625668	LYRM7	Q5U5X0	104 aa		3.73	□□□□□ -1.81
LINC02028-223	ENST00000625668	TEN1	Q86WV5	123 aa		3.73	□□□□□ -1.81
LINC02028-223	ENST00000625668	ANKRD29	Q8N6D5	301 aa		3.73	□□□□□ -1.81
LINC02028-223	ENST00000625668	BAALC-AS2	P0C853	105 aa		3.72	□□□□□ -1.81
LINC02028-223	ENST00000625668	SS18L2	Q9UHA2	77 aa		3.72	□□□□□ -1.81
LINC02028-223	ENST00000625668		A0A1W2PPM0	123 aa		3.71	□□□□□ -1.82
LINC02028-223	ENST00000625668	TRBV20-1	A0A075B6N2	111 aa		3.7	□□□□□ -1.82
LINC02028-223	ENST00000625668	TRBV7-4	A0A0J9YYF1	115 aa		3.7	□□□□□ -1.82
LINC02028-223	ENST00000625668		C9JAW5	83 aa		3.7	□□□□□ -1.82
LINC02028-223	ENST00000625668	CCK	P06307	115 aa		3.7	□□□□□ -1.82
LINC02028-223	ENST00000625668	RBM3	P98179	157 aa	Known RBP	3.69	□□□□□ -1.82
LINC02028-223	ENST00000625668		Q96NJ1	140 aa		3.69	□□□□□ -1.82
LINC02028-223	ENST00000625668	VPS25	Q9BRG1	176 aa		3.69	□□□□□ -1.82
LINC02028-223	ENST00000625668	PCP4L1	A6NKN8	68 aa		3.68	□□□□□ -1.82
LINC02028-223	ENST00000625668	SEC61B	P60468	96 aa	Known RBP	3.68	□□□□□ -1.82
LINC02028-223	ENST00000625668	COL5A1-AS1	Q5SY13	56 aa		3.68	□□□□□ -1.82
LINC02028-223	ENST00000625668	DSCR8	Q96T75	97 aa		3.68	□□□□□ -1.82
LINC02028-223	ENST00000625668	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.67	□□□□□ -1.82
LINC02028-223	ENST00000625668	MTURN	Q8N3F0	131 aa		3.67	□□□□□ -1.82
LINC02028-223	ENST00000625668	SPCS1	Q9Y6A9	102 aa		3.67	□□□□□ -1.82
LINC02028-223	ENST00000625668		A0A0U1RQV1	116 aa		3.66	□□□□□ -1.82
LINC02028-223	ENST00000625668		Q6ZQT0	140 aa		3.66	□□□□□ -1.82
LINC02028-223	ENST00000625668	OBSCN-AS1	Q96MR7	158 aa		3.66	□□□□□ -1.82
LINC02028-223	ENST00000625668	SIGMAR1	Q99720	223 aa		3.66	□□□□□ -1.82
LINC02028-223	ENST00000625668	C14orf132	Q9NPU4	83 aa		3.66	□□□□□ -1.82
LINC02028-223	ENST00000625668	MUC17	Q685J3	4493 aa		3.66	□□□□□ -1.82
LINC02028-223	ENST00000625668	LOC110117498	A0A087WWA1	95 aa		3.65	□□□□□ -1.83
LINC02028-223	ENST00000625668		H3BT86	120 aa		3.65	□□□□□ -1.83
LINC02028-223	ENST00000625668	DEFB116	Q30KQ4	102 aa		3.65	□□□□□ -1.83
LINC02028-223	ENST00000625668	PCOTH	Q58A44	107 aa		3.65	□□□□□ -1.83
LINC02028-223	ENST00000625668	LCE3A	Q5TA76	89 aa		3.65	□□□□□ -1.83
LINC02028-223	ENST00000625668	KRTAP4-1	Q9BYQ7	146 aa		3.65	□□□□□ -1.83
LINC02028-223	ENST00000625668	IGKV4-1	P06312	121 aa		3.64	□□□□□ -1.83
LINC02028-223	ENST00000625668	RPL37	P61927	97 aa	Known RBP	3.64	□□□□□ -1.83
LINC02028-223	ENST00000625668	KRTAP5-2	Q701N4	177 aa		3.64	□□□□□ -1.83
LINC02028-223	ENST00000625668	LINC00472	Q9H8W2	130 aa		3.64	□□□□□ -1.83
LINC02028-223	ENST00000625668		K7EP34	96 aa		3.63	□□□□□ -1.83
LINC02028-223	ENST00000625668	DSCR10	P59022	87 aa		3.63	□□□□□ -1.83
LINC02028-223	ENST00000625668	PDE6G	P18545	87 aa		3.62	□□□□□ -1.83
LINC02028-223	ENST00000625668	PRO0461	Q9UI25	63 aa		3.61	□□□□□ -1.83
LINC02028-223	ENST00000625668	IGHV6-1	A0A0B4J1U7	121 aa		3.6	□□□□□ -1.83
LINC02028-223	ENST00000625668		A0A1B0GW54	56 aa		3.6	□□□□□ -1.83
LINC02028-223	ENST00000625668	LCE3E	Q5T5B0	92 aa		3.6	□□□□□ -1.83
LINC02028-223	ENST00000625668		Q75L30	129 aa		3.6	□□□□□ -1.83
LINC02028-223	ENST00000625668		A0A1B0GVX0	72 aa		3.59	□□□□□ -1.83
LINC02028-223	ENST00000625668		J3KT08	172 aa		3.59	□□□□□ -1.83
LINC02028-223	ENST00000625668	LINC00313	P59037	77 aa		3.59	□□□□□ -1.83
LINC02028-223	ENST00000625668	NOTCH2NL	Q7Z3S9	236 aa		3.59	□□□□□ -1.83
LINC02028-223	ENST00000625668		A8MUU9	505 aa		3.58	□□□□□ -1.84
LINC02028-223	ENST00000625668	KRTAP16-1	A8MUX0	517 aa		3.58	□□□□□ -1.84
LINC02028-223	ENST00000625668	GTF2H5	Q6ZYL4	71 aa		3.58	□□□□□ -1.84
LINC02028-223	ENST00000625668	C20orf166-AS1	Q96NR2	134 aa		3.58	□□□□□ -1.84
LINC02028-223	ENST00000625668	NREP	Q16612	68 aa		3.57	□□□□□ -1.84
LINC02028-223	ENST00000625668	ATP11AUN	Q6ZP68	121 aa		3.57	□□□□□ -1.84
LINC02028-223	ENST00000625668		A8MWP4	228 aa		3.56	□□□□□ -1.84
LINC02028-223	ENST00000625668	C8orf87	E5RJ46	101 aa		3.56	□□□□□ -1.84
LINC02028-223	ENST00000625668	SSPO	A2VEC9	5147 aa		3.55	□□□□□ -1.84
LINC02028-223	ENST00000625668	IGKV3D-7	A0A0C4DH55	119 aa		3.55	□□□□□ -1.84
LINC02028-223	ENST00000625668	NDUFB1	O75438	58 aa		3.55	□□□□□ -1.84
LINC02028-223	ENST00000625668		F8W1H4	67 aa		3.54	□□□□□ -1.84
LINC02028-223	ENST00000625668	KRTAP19-2	Q3LHN2	52 aa		3.54	□□□□□ -1.84
LINC02028-223	ENST00000625668		K7EQZ3	153 aa		3.53	□□□□□ -1.84
LINC02028-223	ENST00000625668	ETDB	Q3ZM63	59 aa		3.53	□□□□□ -1.84
LINC02028-223	ENST00000625668		Q6ZVQ6	151 aa		3.53	□□□□□ -1.84
LINC02028-223	ENST00000625668	C8orf17	Q9NRJ1	99 aa		3.53	□□□□□ -1.84
LINC02028-223	ENST00000625668	BPY2	O14599	106 aa		3.52	□□□□□ -1.85
LINC02028-223	ENST00000625668	PRR15	Q8IV56	129 aa		3.52	□□□□□ -1.85
LINC02028-223	ENST00000625668	MMP24-AS1	A0A0U1RRL7	71 aa		3.51	□□□□□ -1.85
LINC02028-223	ENST00000625668	LINC00846	Q9NV44	126 aa		3.51	□□□□□ -1.85
LINC02028-223	ENST00000625668		Q8N9L7	120 aa		3.5	□□□□□ -1.85
LINC02028-223	ENST00000625668	UBL5	Q9BZL1	73 aa		3.5	□□□□□ -1.85
LINC02028-223	ENST00000625668	MT1H	P80294	61 aa		3.49	□□□□□ -1.85
LINC02028-223	ENST00000625668	COX6B2	Q6YFQ2	88 aa		3.49	□□□□□ -1.85
LINC02028-223	ENST00000625668	TMEM254	Q8TBM7	123 aa		3.49	□□□□□ -1.85
LINC02028-223	ENST00000625668	ZCCHC13	Q8WW36	166 aa	Known RBP	3.49	□□□□□ -1.85
LINC02028-223	ENST00000625668	SYNE2	Q8WXH0	6885 aa	Known RBP	3.48	□□□□□ -1.85
LINC02028-223	ENST00000625668		A0A1B0GV90	55 aa		3.48	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms