RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 COL12A1Q99715 3063 aa2.33□□□□□ -2.04
CHD2-204ENST00000625463 BAHCC1Q9P281 2608 aa2.33□□□□□ -2.04
CHD2-204ENST00000625463 RPS29P62273 56 aaKnown RBP2.33□□□□□ -2.04
CHD2-204ENST00000625463 KRTAP13-2Q52LG2 175 aa2.33□□□□□ -2.04
CHD2-204ENST00000625463 EP400Q96L91 3159 aa2.33□□□□□ -2.04
CHD2-204ENST00000625463 REV3LO60673 3130 aa2.33□□□□□ -2.04
CHD2-204ENST00000625463 LAMA5O15230 3695 aa2.32□□□□□ -2.04
CHD2-204ENST00000625463 TACC2O95359 2948 aa2.32□□□□□ -2.04
CHD2-204ENST00000625463 SRRM2Q9UQ35 2752 aaKnown RBP2.32□□□□□ -2.04
CHD2-204ENST00000625463 CELSR1Q9NYQ6 3014 aa2.31□□□□□ -2.04
CHD2-204ENST00000625463 ATRXP46100 2492 aa2.31□□□□□ -2.04
CHD2-204ENST00000625463 KRTAP5-3Q6L8H2 238 aa2.31□□□□□ -2.04
CHD2-204ENST00000625463 DNAH11Q96DT5 4516 aa2.31□□□□□ -2.04
CHD2-204ENST00000625463 FRAS1Q86XX4 4008 aa2.3□□□□□ -2.04
CHD2-204ENST00000625463 HIVEP3Q5T1R4 2406 aa2.3□□□□□ -2.04
CHD2-204ENST00000625463 NAV2Q8IVL1 2488 aa2.3□□□□□ -2.04
CHD2-204ENST00000625463 LAMA1P25391 3075 aa2.3□□□□□ -2.04
CHD2-204ENST00000625463 FREM2Q5SZK8 3169 aa2.29□□□□□ -2.04
CHD2-204ENST00000625463 MT3P25713 68 aa2.29□□□□□ -2.04
CHD2-204ENST00000625463 KRTAP1-1Q07627 177 aa2.29□□□□□ -2.04
CHD2-204ENST00000625463 NF1P21359 2839 aa2.29□□□□□ -2.04
CHD2-204ENST00000625463 DNAH1Q9P2D7 4330 aa2.28□□□□□ -2.04
CHD2-204ENST00000625463 KRTAP17-1Q9BYP8 105 aa2.28□□□□□ -2.04
CHD2-204ENST00000625463 SMG1Q96Q15 3661 aaKnown RBP2.28□□□□□ -2.05
CHD2-204ENST00000625463 APCP25054 2843 aa2.27□□□□□ -2.05
CHD2-204ENST00000625463 JMJD1CQ15652 2540 aa2.27□□□□□ -2.05
CHD2-204ENST00000625463 SPTAN1Q13813 2472 aaKnown RBP2.27□□□□□ -2.05
CHD2-204ENST00000625463 TRRAPQ9Y4A5 3859 aa2.27□□□□□ -2.05
CHD2-204ENST00000625463 MEGF8Q7Z7M0 2845 aa2.27□□□□□ -2.05
CHD2-204ENST00000625463 TEX15Q9BXT5 2789 aa2.27□□□□□ -2.05
CHD2-204ENST00000625463 RIF1Q5UIP0 2472 aaKnown RBP2.27□□□□□ -2.05
CHD2-204ENST00000625463 KRTAP10-9P60411 292 aa2.26□□□□□ -2.05
CHD2-204ENST00000625463 ATMQ13315 3056 aa2.26□□□□□ -2.05
CHD2-204ENST00000625463 SONP18583 2426 aaKnown RBP2.25□□□□□ -2.05
CHD2-204ENST00000625463 BSNQ9UPA5 3926 aa2.24□□□□□ -2.05
CHD2-204ENST00000625463 TLN1Q9Y490 2541 aaKnown RBP2.24□□□□□ -2.05
CHD2-204ENST00000625463 MYCBP2O75592 4640 aa2.24□□□□□ -2.05
CHD2-204ENST00000625463 PTPN13Q12923 2485 aa2.24□□□□□ -2.05
CHD2-204ENST00000625463 CELSR3Q9NYQ7 3312 aa2.24□□□□□ -2.05
CHD2-204ENST00000625463 LAMA3Q16787 3333 aa2.24□□□□□ -2.05
CHD2-204ENST00000625463 LOC400499M0QZD8 3231 aa2.23□□□□□ -2.05
CHD2-204ENST00000625463 LYSTQ99698 3801 aa2.23□□□□□ -2.05
CHD2-204ENST00000625463 TNP1P09430 55 aa2.22□□□□□ -2.05
CHD2-204ENST00000625463 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
CHD2-204ENST00000625463 CMYA5Q8N3K9 4069 aa2.22□□□□□ -2.05
CHD2-204ENST00000625463 CEP290O15078 2479 aa2.22□□□□□ -2.05
CHD2-204ENST00000625463 VCANP13611 3396 aa2.21□□□□□ -2.06
CHD2-204ENST00000625463 USP9XQ93008 2570 aaPredicted RBP2.21□□□□□ -2.06
CHD2-204ENST00000625463 BRCA2P51587 3418 aa2.2□□□□□ -2.06
CHD2-204ENST00000625463 ANK2Q01484 3957 aa2.2□□□□□ -2.06
CHD2-204ENST00000625463 RELNP78509 3460 aa2.2□□□□□ -2.06
CHD2-204ENST00000625463 DMBT1Q9UGM3 2413 aaPredicted RBP2.2□□□□□ -2.06
CHD2-204ENST00000625463 SETXQ7Z333 2677 aaKnown RBP2.2□□□□□ -2.06
CHD2-204ENST00000625463 TLN2Q9Y4G6 2542 aa2.2□□□□□ -2.06
CHD2-204ENST00000625463 PKD1L2Q7Z442 2459 aa2.19□□□□□ -2.06
CHD2-204ENST00000625463 CACNA1AO00555 2505 aa2.19□□□□□ -2.06
CHD2-204ENST00000625463 TTC28Q96AY4 2481 aa2.18□□□□□ -2.06
CHD2-204ENST00000625463 DCHS2Q6V1P9 2916 aa2.18□□□□□ -2.06
CHD2-204ENST00000625463 CENPEQ02224 2701 aa2.18□□□□□ -2.06
CHD2-204ENST00000625463 KRTAP10-10P60014 251 aa2.18□□□□□ -2.06
CHD2-204ENST00000625463 KRTAP10-3P60369 221 aa2.18□□□□□ -2.06
CHD2-204ENST00000625463 DOPEY1Q5JWR5 2465 aa2.18□□□□□ -2.06
CHD2-204ENST00000625463 HRNRQ86YZ3 2850 aaPredicted RBP2.18□□□□□ -2.06
CHD2-204ENST00000625463 UTP20O75691 2785 aaKnown RBP2.17□□□□□ -2.06
CHD2-204ENST00000625463 CDH23Q9H251 3354 aa2.17□□□□□ -2.06
CHD2-204ENST00000625463 C9orf92A6NGG3 77 aa2.17□□□□□ -2.06
CHD2-204ENST00000625463 NIPBLQ6KC79 2804 aaeCLIP2.17□□□□□ -2.06
CHD2-204ENST00000625463 DNAH2Q9P225 4427 aa2.16□□□□□ -2.06
CHD2-204ENST00000625463 DNAH8Q96JB1 4490 aa2.16□□□□□ -2.06
CHD2-204ENST00000625463 DYNC2H1Q8NCM8 4307 aaKnown RBP2.15□□□□□ -2.06
CHD2-204ENST00000625463 DNAH3Q8TD57 4116 aa2.15□□□□□ -2.07
CHD2-204ENST00000625463 ASPMQ8IZT6 3477 aa2.15□□□□□ -2.07
CHD2-204ENST00000625463 VPS13CQ709C8 3753 aa2.14□□□□□ -2.07
CHD2-204ENST00000625463 TENM4Q6N022 2769 aa2.14□□□□□ -2.07
CHD2-204ENST00000625463 COL7A1Q02388 2944 aa2.14□□□□□ -2.07
CHD2-204ENST00000625463 ITPR3Q14573 2671 aa2.14□□□□□ -2.07
CHD2-204ENST00000625463 KRTAP1-4P0C5Y4 121 aa2.14□□□□□ -2.07
CHD2-204ENST00000625463 SMR3AQ99954 134 aa2.14□□□□□ -2.07
CHD2-204ENST00000625463 TGP01266 2768 aa2.14□□□□□ -2.07
CHD2-204ENST00000625463 DNAH7Q8WXX0 4024 aa2.13□□□□□ -2.07
CHD2-204ENST00000625463 SETD2Q9BYW2 2564 aaPredicted RBP2.13□□□□□ -2.07
CHD2-204ENST00000625463 CHD8Q9HCK8 2581 aa2.13□□□□□ -2.07
CHD2-204ENST00000625463 CSMD3Q7Z407 3707 aa2.13□□□□□ -2.07
CHD2-204ENST00000625463 DNAH6Q9C0G6 4158 aa2.13□□□□□ -2.07
CHD2-204ENST00000625463 LRRK2Q5S007 2527 aa2.12□□□□□ -2.07
CHD2-204ENST00000625463 PRKDCP78527 4128 aaKnown RBP2.12□□□□□ -2.07
CHD2-204ENST00000625463 SACSQ9NZJ4 4579 aa2.12□□□□□ -2.07
CHD2-204ENST00000625463 ANK3Q12955 4377 aaKnown RBP2.12□□□□□ -2.07
CHD2-204ENST00000625463 MTORP42345 2549 aa2.12□□□□□ -2.07
CHD2-204ENST00000625463 PIEZO1Q92508 2521 aa2.12□□□□□ -2.07
CHD2-204ENST00000625463 DNAH10Q8IVF4 4471 aa2.11□□□□□ -2.07
CHD2-204ENST00000625463 DNAH9Q9NYC9 4486 aa2.11□□□□□ -2.07
CHD2-204ENST00000625463 HECTD4Q9Y4D8 3996 aa2.11□□□□□ -2.07
CHD2-204ENST00000625463 HECTD1Q9ULT8 2610 aa2.11□□□□□ -2.07
CHD2-204ENST00000625463 CFAP46Q8IYW2 2715 aa2.11□□□□□ -2.07
CHD2-204ENST00000625463 MYO15AQ9UKN7 3530 aa2.11□□□□□ -2.07
CHD2-204ENST00000625463 KRTAP10-12P60413 245 aa2.1□□□□□ -2.07
CHD2-204ENST00000625463 GCN1Q92616 2671 aaKnown RBP2.1□□□□□ -2.07
CHD2-204ENST00000625463 MYO9AB2RTY4 2548 aa2.09□□□□□ -2.07
CHD2-204ENST00000625463 HUWE1Q7Z6Z7 4374 aaKnown RBP2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms