RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 VPS25Q9BRG1 176 aa6.86□□□□□ -1.31
PNKP-218ENST00000625299 DNAL4O96015 105 aa6.85□□□□□ -1.31
PNKP-218ENST00000625299 COX8AP10176 69 aa6.85□□□□□ -1.31
PNKP-218ENST00000625299 PYY3Q5JQD4 70 aa6.85□□□□□ -1.31
PNKP-218ENST00000625299 ORMDL1Q9P0S3 153 aa6.85□□□□□ -1.31
PNKP-218ENST00000625299 A6NN06 94 aa6.82□□□□□ -1.32
PNKP-218ENST00000625299 TRIAP1O43715 76 aa6.82□□□□□ -1.32
PNKP-218ENST00000625299 PRO1854Q9UHT4 67 aa6.81□□□□□ -1.32
PNKP-218ENST00000625299 TMEM256-PLSCR3K7ERE1 68 aa6.79□□□□□ -1.32
PNKP-218ENST00000625299 DLEU1O43261 78 aa6.79□□□□□ -1.32
PNKP-218ENST00000625299 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
PNKP-218ENST00000625299 C14orf144Q96I85 54 aa6.79□□□□□ -1.32
PNKP-218ENST00000625299 H3BQ85 93 aa6.78□□□□□ -1.32
PNKP-218ENST00000625299 J3KT08 172 aa6.77□□□□□ -1.33
PNKP-218ENST00000625299 HIGD1BQ9P298 99 aa6.76□□□□□ -1.33
PNKP-218ENST00000625299 NDUFB1O75438 58 aa6.75□□□□□ -1.33
PNKP-218ENST00000625299 CEND1Q8N111 149 aa6.75□□□□□ -1.33
PNKP-218ENST00000625299 DSCR8Q96T75 97 aa6.75□□□□□ -1.33
PNKP-218ENST00000625299 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
PNKP-218ENST00000625299 A6NJY4 79 aa6.74□□□□□ -1.33
PNKP-218ENST00000625299 PSMB2P49721 201 aa6.74□□□□□ -1.33
PNKP-218ENST00000625299 C8orf17Q9NRJ1 99 aa6.74□□□□□ -1.33
PNKP-218ENST00000625299 MDN1Q9NU22 5596 aa6.73□□□□□ -1.33
PNKP-218ENST00000625299 IGKV3D-7A0A0C4DH55 119 aa6.73□□□□□ -1.33
PNKP-218ENST00000625299 C2orf91Q6ZV80 131 aa6.73□□□□□ -1.33
PNKP-218ENST00000625299 VAMP8Q9BV40 100 aa6.73□□□□□ -1.33
PNKP-218ENST00000625299 UBE2V1Q13404 147 aa6.72□□□□□ -1.33
PNKP-218ENST00000625299 FXYD2P54710 66 aa6.71□□□□□ -1.34
PNKP-218ENST00000625299 RBM3P98179 157 aaKnown RBP6.71□□□□□ -1.34
PNKP-218ENST00000625299 PAM16Q9Y3D7 125 aa6.71□□□□□ -1.34
PNKP-218ENST00000625299 KMT2DO14686 5537 aa6.69□□□□□ -1.34
PNKP-218ENST00000625299 SPATA45Q537H7 98 aa6.69□□□□□ -1.34
PNKP-218ENST00000625299 FAM236AA0A1B0GUQ0 79 aa6.68□□□□□ -1.34
PNKP-218ENST00000625299 FAM236BA0A1B0GV22 79 aa6.68□□□□□ -1.34
PNKP-218ENST00000625299 Q5VV11 94 aa6.68□□□□□ -1.34
PNKP-218ENST00000625299 Q6ZVQ6 151 aa6.68□□□□□ -1.34
PNKP-218ENST00000625299 TSTD3H0UI37 97 aa6.67□□□□□ -1.34
PNKP-218ENST00000625299 K7ERJ3 54 aa6.67□□□□□ -1.34
PNKP-218ENST00000625299 MT1BP07438 61 aa6.67□□□□□ -1.34
PNKP-218ENST00000625299 COX6CP09669 75 aa6.67□□□□□ -1.34
PNKP-218ENST00000625299 Q6ZQT0 140 aa6.67□□□□□ -1.34
PNKP-218ENST00000625299 KRTAP5-9P26371 169 aa6.66□□□□□ -1.34
PNKP-218ENST00000625299 C9JAW5 83 aa6.65□□□□□ -1.34
PNKP-218ENST00000625299 C21orf62-AS1Q17RA5 79 aa6.65□□□□□ -1.34
PNKP-218ENST00000625299 UQCR10Q9UDW1 63 aa6.65□□□□□ -1.34
PNKP-218ENST00000625299 IGKV2D-30A0A075B6S6 120 aa6.63□□□□□ -1.35
PNKP-218ENST00000625299 IGKV2-30P06310 120 aa6.63□□□□□ -1.35
PNKP-218ENST00000625299 NDUFS5O43920 106 aa6.61□□□□□ -1.35
PNKP-218ENST00000625299 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
PNKP-218ENST00000625299 C5orf47Q569G3 176 aa6.61□□□□□ -1.35
PNKP-218ENST00000625299 MRPL34Q9BQ48 92 aaKnown RBP6.6□□□□□ -1.35
PNKP-218ENST00000625299 KRTAP2-3P0C7H8 128 aa6.58□□□□□ -1.36
PNKP-218ENST00000625299 KRTAP2-4Q9BYR9 128 aa6.58□□□□□ -1.36
PNKP-218ENST00000625299 KRTAP19-8Q3LI54 63 aa6.57□□□□□ -1.36
PNKP-218ENST00000625299 PRR15Q8IV56 129 aa6.57□□□□□ -1.36
PNKP-218ENST00000625299 TMEM254Q8TBM7 123 aa6.57□□□□□ -1.36
PNKP-218ENST00000625299 MMP24-AS1A0A0U1RRL7 71 aa6.56□□□□□ -1.36
PNKP-218ENST00000625299 SCGB1C2P0DMR2 95 aa6.56□□□□□ -1.36
PNKP-218ENST00000625299 C7orf65Q6ZTY9 151 aa6.56□□□□□ -1.36
PNKP-218ENST00000625299 BAALC-AS2P0C853 105 aa6.55□□□□□ -1.36
PNKP-218ENST00000625299 HSD52Q0P140 79 aa6.54□□□□□ -1.36
PNKP-218ENST00000625299 C4orf26Q17RF5 130 aa6.54□□□□□ -1.36
PNKP-218ENST00000625299 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
PNKP-218ENST00000625299 hDV103S1A0JD37 113 aa6.52□□□□□ -1.37
PNKP-218ENST00000625299 PCP4L1A6NKN8 68 aa6.52□□□□□ -1.37
PNKP-218ENST00000625299 M0R143 59 aa6.51□□□□□ -1.37
PNKP-218ENST00000625299 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
PNKP-218ENST00000625299 Q5W150 140 aa6.49□□□□□ -1.37
PNKP-218ENST00000625299 A0A1B0GW54 56 aa6.48□□□□□ -1.37
PNKP-218ENST00000625299 NREPQ16612 68 aa6.48□□□□□ -1.37
PNKP-218ENST00000625299 LOC110117498A0A087WWA1 95 aa6.47□□□□□ -1.37
PNKP-218ENST00000625299 JMJD7-PLA2G4BH0Y9G9 81 aa6.47□□□□□ -1.37
PNKP-218ENST00000625299 K7EQZ3 153 aa6.47□□□□□ -1.37
PNKP-218ENST00000625299 S4R3F8 94 aa6.47□□□□□ -1.37
PNKP-218ENST00000625299 SPRR2EP22531 72 aa6.45□□□□□ -1.38
PNKP-218ENST00000625299 SPRR2BP35325 72 aa6.45□□□□□ -1.38
PNKP-218ENST00000625299 SPRR2AP35326 72 aa6.45□□□□□ -1.38
PNKP-218ENST00000625299 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
PNKP-218ENST00000625299 C14orf132Q9NPU4 83 aa6.44□□□□□ -1.38
PNKP-218ENST00000625299 PDE6GP18545 87 aa6.43□□□□□ -1.38
PNKP-218ENST00000625299 COL5A1-AS1Q5SY13 56 aa6.43□□□□□ -1.38
PNKP-218ENST00000625299 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
PNKP-218ENST00000625299 KLKP1Q107X0 134 aa6.42□□□□□ -1.38
PNKP-218ENST00000625299 ATXN8Q156A1 80 aa6.4□□□□□ -1.38
PNKP-218ENST00000625299 LCA10Q71F78 164 aa6.4□□□□□ -1.38
PNKP-218ENST00000625299 HCG22E2RYF7 251 aa6.38□□□□□ -1.39
PNKP-218ENST00000625299 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
PNKP-218ENST00000625299 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
PNKP-218ENST00000625299 BATFQ16520 125 aa6.36□□□□□ -1.39
PNKP-218ENST00000625299 KRTAP2-2Q9BYT5 123 aa6.35□□□□□ -1.39
PNKP-218ENST00000625299 KRTAP2-1Q9BYU5 128 aa6.35□□□□□ -1.39
PNKP-218ENST00000625299 C9orf118A6NHY6 69 aa6.34□□□□□ -1.39
PNKP-218ENST00000625299 CASC2Q6XLA1 102 aa6.34□□□□□ -1.39
PNKP-218ENST00000625299 C1orf64Q8NEQ6 169 aa6.34□□□□□ -1.39
PNKP-218ENST00000625299 BPY2O14599 106 aa6.33□□□□□ -1.4
PNKP-218ENST00000625299 SMCPP49901 116 aaPredicted RBP6.33□□□□□ -1.4
PNKP-218ENST00000625299 NAA38Q9BRA0 125 aaKnown RBP6.33□□□□□ -1.4
PNKP-218ENST00000625299 Q8N9L7 120 aa6.31□□□□□ -1.4
PNKP-218ENST00000625299 CXCL6P80162 114 aa6.3□□□□□ -1.4
PNKP-218ENST00000625299 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms