RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 H7BZZ5 65 aa11.44□□□□□ -0.58
TREX1-205ENST00000625293 ASB16-AS1Q495Z4 193 aa11.44□□□□□ -0.58
TREX1-205ENST00000625293 SPINK6Q6UWN8 80 aa11.42□□□□□ -0.58
TREX1-205ENST00000625293 A0A1B0GVX0 72 aa11.41□□□□□ -0.58
TREX1-205ENST00000625293 Q5VSD8 79 aa11.41□□□□□ -0.58
TREX1-205ENST00000625293 Q5XG85 94 aa11.39□□□□□ -0.59
TREX1-205ENST00000625293 C8orf17Q9NRJ1 99 aa11.39□□□□□ -0.59
TREX1-205ENST00000625293 NDUFC1O43677 76 aa11.38□□□□□ -0.59
TREX1-205ENST00000625293 KRTAP10-4P60372 401 aaPredicted RBP11.38□□□□□ -0.59
TREX1-205ENST00000625293 hDV103S1A0JD37 113 aa11.37□□□□□ -0.59
TREX1-205ENST00000625293 PLA2G1BP04054 148 aaKnown RBP11.37□□□□□ -0.59
TREX1-205ENST00000625293 C5orf47Q569G3 176 aa11.36□□□□□ -0.59
TREX1-205ENST00000625293 IGHV6-1A0A0B4J1U7 121 aa11.34□□□□□ -0.59
TREX1-205ENST00000625293 ZCCHC13Q8WW36 166 aaKnown RBP11.34□□□□□ -0.59
TREX1-205ENST00000625293 FAM229AH3BQW9 127 aa11.33□□□□□ -0.59
TREX1-205ENST00000625293 NOTCH2NLQ7Z3S9 236 aa11.31□□□□□ -0.6
TREX1-205ENST00000625293 FAM236DA0A1B0GTK5 79 aa11.3□□□□□ -0.6
TREX1-205ENST00000625293 FAM236CP0DP71 79 aa11.3□□□□□ -0.6
TREX1-205ENST00000625293 TYMSOSQ8TAI1 123 aa11.3□□□□□ -0.6
TREX1-205ENST00000625293 C1orf195Q5TG92 126 aa11.28□□□□□ -0.6
TREX1-205ENST00000625293 PKHD1L1Q86WI1 4243 aa11.28□□□□□ -0.6
TREX1-205ENST00000625293 FLG2Q5D862 2391 aaPredicted RBP11.26□□□□□ -0.61
TREX1-205ENST00000625293 LIMD2Q9BT23 127 aa11.26□□□□□ -0.61
TREX1-205ENST00000625293 MYCBP2O75592 4640 aa11.25□□□□□ -0.61
TREX1-205ENST00000625293 PRR26Q8N8Z3 221 aa11.25□□□□□ -0.61
TREX1-205ENST00000625293 MRPL34Q9BQ48 92 aaKnown RBP11.25□□□□□ -0.61
TREX1-205ENST00000625293 MP68P56378 58 aa11.24□□□□□ -0.61
TREX1-205ENST00000625293 RPS28P62857 69 aaKnown RBP11.24□□□□□ -0.61
TREX1-205ENST00000625293 H0Y9P7 68 aa11.23□□□□□ -0.61
TREX1-205ENST00000625293 TP53AIP1Q9HCN2 124 aa11.23□□□□□ -0.61
TREX1-205ENST00000625293 SPINK1P00995 79 aa11.22□□□□□ -0.61
TREX1-205ENST00000625293 C8orf87E5RJ46 101 aa11.21□□□□□ -0.61
TREX1-205ENST00000625293 H3BPC8 53 aa11.21□□□□□ -0.61
TREX1-205ENST00000625293 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.62
TREX1-205ENST00000625293 ATP5EP56381 51 aaPredicted RBP11.19□□□□□ -0.62
TREX1-205ENST00000625293 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
TREX1-205ENST00000625293 LINC00208Q96KT6 92 aa11.18□□□□□ -0.62
TREX1-205ENST00000625293 RPS29P62273 56 aaKnown RBP11.18□□□□□ -0.62
TREX1-205ENST00000625293 LINC00304Q8N9R0 145 aa11.17□□□□□ -0.62
TREX1-205ENST00000625293 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
TREX1-205ENST00000625293 OXTP01178 125 aa11.15□□□□□ -0.62
TREX1-205ENST00000625293 SPAG11AQ6PDA7 123 aa11.14□□□□□ -0.63
TREX1-205ENST00000625293 NDUFS5O43920 106 aa11.13□□□□□ -0.63
TREX1-205ENST00000625293 LINC00313P59037 77 aa11.12□□□□□ -0.63
TREX1-205ENST00000625293 C1orf64Q8NEQ6 169 aa11.11□□□□□ -0.63
TREX1-205ENST00000625293 SERP1Q9Y6X1 66 aa11.11□□□□□ -0.63
TREX1-205ENST00000625293 KRTAP16-1A8MUX0 517 aa11.08□□□□□ -0.64
TREX1-205ENST00000625293 FAT3Q8TDW7 4589 aa11.07□□□□□ -0.64
TREX1-205ENST00000625293 KRTAP13-3Q3SY46 172 aa11.06□□□□□ -0.64
TREX1-205ENST00000625293 Q8N9P0 234 aaPredicted RBP11.06□□□□□ -0.64
TREX1-205ENST00000625293 HERC1Q15751 4861 aa11.06□□□□□ -0.64
TREX1-205ENST00000625293 Q5W150 140 aa11.03□□□□□ -0.64
TREX1-205ENST00000625293 CYP4F30PQ9H0H9 118 aa11□□□□□ -0.65
TREX1-205ENST00000625293 SPANXA2-OT1Q8N9U9 137 aa11□□□□□ -0.65
TREX1-205ENST00000625293 TNXBP22105 4242 aa10.99□□□□□ -0.65
TREX1-205ENST00000625293 DMBT1Q9UGM3 2413 aaPredicted RBP10.99□□□□□ -0.65
TREX1-205ENST00000625293 J3QL48 77 aa10.94□□□□□ -0.66
TREX1-205ENST00000625293 LOC101927531A0A1B0GV80 90 aa10.93□□□□□ -0.66
TREX1-205ENST00000625293 PRR4Q16378 134 aa10.93□□□□□ -0.66
TREX1-205ENST00000625293 KRTAP10-8P60410 259 aa10.9□□□□□ -0.66
TREX1-205ENST00000625293 PCOTHQ58A44 107 aa10.9□□□□□ -0.66
TREX1-205ENST00000625293 IGLV7-46A0A075B6I9 117 aa10.9□□□□□ -0.67
TREX1-205ENST00000625293 MT1HL1P0DM35 61 aa10.88□□□□□ -0.67
TREX1-205ENST00000625293 SMIM26A0A096LP01 95 aa10.86□□□□□ -0.67
TREX1-205ENST00000625293 FP248Q71RG6 208 aaPredicted RBP10.82□□□□□ -0.68
TREX1-205ENST00000625293 RETNLBQ9BQ08 111 aa10.82□□□□□ -0.68
TREX1-205ENST00000625293 IGKV2-30P06310 120 aa10.8□□□□□ -0.68
TREX1-205ENST00000625293 C20orf166-AS1Q96NR2 134 aa10.75□□□□□ -0.69
TREX1-205ENST00000625293 C9orf92A6NGG3 77 aa10.74□□□□□ -0.69
TREX1-205ENST00000625293 A8MUU9 505 aa10.74□□□□□ -0.69
TREX1-205ENST00000625293 HRES1P13985 223 aa10.7□□□□□ -0.7
TREX1-205ENST00000625293 C4orf26Q17RF5 130 aa10.7□□□□□ -0.7
TREX1-205ENST00000625293 COA5Q86WW8 74 aa10.68□□□□□ -0.7
TREX1-205ENST00000625293 HMCN2Q8NDA2 5059 aa10.66□□□□□ -0.7
TREX1-205ENST00000625293 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.71
TREX1-205ENST00000625293 MPLKIPQ8TAP9 179 aa10.62□□□□□ -0.71
TREX1-205ENST00000625293 DMAC1Q96GE9 116 aa10.6□□□□□ -0.71
TREX1-205ENST00000625293 Q1T7F1 81 aa10.6□□□□□ -0.71
TREX1-205ENST00000625293 Q75L30 129 aa10.59□□□□□ -0.71
TREX1-205ENST00000625293 C7orf65Q6ZTY9 151 aa10.58□□□□□ -0.72
TREX1-205ENST00000625293 ACYP2P14621 99 aa10.53□□□□□ -0.72
TREX1-205ENST00000625293 V9GYY9 64 aa10.47□□□□□ -0.73
TREX1-205ENST00000625293 UBR4Q5T4S7 5183 aa10.44□□□□□ -0.74
TREX1-205ENST00000625293 LRP2P98164 4655 aa10.44□□□□□ -0.74
TREX1-205ENST00000625293 XP32Q5T750 250 aa10.43□□□□□ -0.74
TREX1-205ENST00000625293 RPL37P61927 97 aaKnown RBP10.42□□□□□ -0.74
TREX1-205ENST00000625293 LPAP08519 4548 aa10.41□□□□□ -0.74
TREX1-205ENST00000625293 SPINK7P58062 85 aa10.41□□□□□ -0.74
TREX1-205ENST00000625293 PSPHP1O15172 72 aa10.37□□□□□ -0.75
TREX1-205ENST00000625293 A8MUN3 132 aa10.37□□□□□ -0.75
TREX1-205ENST00000625293 ATP11AUNQ6ZP68 121 aa10.36□□□□□ -0.75
TREX1-205ENST00000625293 LINC01558Q9Y6Z2 57 aa10.36□□□□□ -0.75
TREX1-205ENST00000625293 CHKB-CPT1BH3BT56 60 aa10.35□□□□□ -0.75
TREX1-205ENST00000625293 Q5VV11 94 aa10.32□□□□□ -0.76
TREX1-205ENST00000625293 SVIPQ8NHG7 77 aa10.31□□□□□ -0.76
TREX1-205ENST00000625293 PRR15LQ9BU68 103 aa10.3□□□□□ -0.76
TREX1-205ENST00000625293 KRTAP3-1Q9BYR8 98 aa10.3□□□□□ -0.76
TREX1-205ENST00000625293 TPRXLQ17RH7 258 aa10.29□□□□□ -0.76
TREX1-205ENST00000625293 COX6B2Q6YFQ2 88 aa10.21□□□□□ -0.78
TREX1-205ENST00000625293 RNF213Q63HN8 5207 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms