RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 VPS25Q9BRG1 176 aa6.46□□□□□ -1.38
LINC00963-217ENST00000624009 C8orf87E5RJ46 101 aa6.45□□□□□ -1.38
LINC00963-217ENST00000624009 A0A1B0GVX0 72 aa6.43□□□□□ -1.38
LINC00963-217ENST00000624009 IGHV6-1A0A0B4J1U7 121 aa6.42□□□□□ -1.38
LINC00963-217ENST00000624009 LOC105371267A0A1B0GV96 52 aa6.42□□□□□ -1.38
LINC00963-217ENST00000624009 NAA38Q9BRA0 125 aaKnown RBP6.42□□□□□ -1.38
LINC00963-217ENST00000624009 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
LINC00963-217ENST00000624009 DEFB116Q30KQ4 102 aa6.41□□□□□ -1.38
LINC00963-217ENST00000624009 NOTCH2NLQ7Z3S9 236 aa6.41□□□□□ -1.38
LINC00963-217ENST00000624009 C9orf118A6NHY6 69 aa6.39□□□□□ -1.39
LINC00963-217ENST00000624009 NDUFB1O75438 58 aa6.39□□□□□ -1.39
LINC00963-217ENST00000624009 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
LINC00963-217ENST00000624009 H3BT86 120 aa6.38□□□□□ -1.39
LINC00963-217ENST00000624009 BATFQ16520 125 aa6.38□□□□□ -1.39
LINC00963-217ENST00000624009 M0R2T5 61 aa6.37□□□□□ -1.39
LINC00963-217ENST00000624009 C14orf132Q9NPU4 83 aa6.37□□□□□ -1.39
LINC00963-217ENST00000624009 A0A1W2PPM0 123 aa6.36□□□□□ -1.39
LINC00963-217ENST00000624009 A8MWP4 228 aa6.36□□□□□ -1.39
LINC00963-217ENST00000624009 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
LINC00963-217ENST00000624009 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
LINC00963-217ENST00000624009 MPLKIPQ8TAP9 179 aa6.33□□□□□ -1.4
LINC00963-217ENST00000624009 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
LINC00963-217ENST00000624009 NREPQ16612 68 aa6.31□□□□□ -1.4
LINC00963-217ENST00000624009 ZCCHC13Q8WW36 166 aaKnown RBP6.31□□□□□ -1.4
LINC00963-217ENST00000624009 IGKV3D-7A0A0C4DH55 119 aa6.3□□□□□ -1.4
LINC00963-217ENST00000624009 C8orf17Q9NRJ1 99 aa6.3□□□□□ -1.4
LINC00963-217ENST00000624009 RBM12B-AS1Q9P1G2 102 aa6.3□□□□□ -1.4
LINC00963-217ENST00000624009 HRES1P13985 223 aa6.29□□□□□ -1.4
LINC00963-217ENST00000624009 PRR15Q8IV56 129 aa6.29□□□□□ -1.4
LINC00963-217ENST00000624009 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.4
LINC00963-217ENST00000624009 Q6ZVQ6 151 aa6.27□□□□□ -1.41
LINC00963-217ENST00000624009 COL5A1-AS1Q5SY13 56 aa6.26□□□□□ -1.41
LINC00963-217ENST00000624009 SPCS1Q9Y6A9 102 aa6.26□□□□□ -1.41
LINC00963-217ENST00000624009 MTURNQ8N3F0 131 aa6.25□□□□□ -1.41
LINC00963-217ENST00000624009 FAM236DA0A1B0GTK5 79 aa6.24□□□□□ -1.41
LINC00963-217ENST00000624009 FAM236CP0DP71 79 aa6.24□□□□□ -1.41
LINC00963-217ENST00000624009 TMEM254Q8TBM7 123 aa6.24□□□□□ -1.41
LINC00963-217ENST00000624009 MMP24-AS1A0A0U1RRL7 71 aa6.22□□□□□ -1.41
LINC00963-217ENST00000624009 SPINK7P58062 85 aa6.22□□□□□ -1.41
LINC00963-217ENST00000624009 BPY2O14599 106 aa6.21□□□□□ -1.42
LINC00963-217ENST00000624009 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.42
LINC00963-217ENST00000624009 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
LINC00963-217ENST00000624009 hDV103S1A0JD37 113 aa6.2□□□□□ -1.42
LINC00963-217ENST00000624009 K7EQZ3 153 aa6.19□□□□□ -1.42
LINC00963-217ENST00000624009 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
LINC00963-217ENST00000624009 PRO0461Q9UI25 63 aa6.18□□□□□ -1.42
LINC00963-217ENST00000624009 K7EP34 96 aa6.17□□□□□ -1.42
LINC00963-217ENST00000624009 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
LINC00963-217ENST00000624009 WFDC13Q8IUB5 93 aa6.14□□□□□ -1.43
LINC00963-217ENST00000624009 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
LINC00963-217ENST00000624009 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
LINC00963-217ENST00000624009 UBL5Q9BZL1 73 aa6.13□□□□□ -1.43
LINC00963-217ENST00000624009 F8W1H4 67 aa6.1□□□□□ -1.43
LINC00963-217ENST00000624009 NDUFS5O43920 106 aa6.1□□□□□ -1.43
LINC00963-217ENST00000624009 CASC2Q6XLA1 102 aa6.1□□□□□ -1.43
LINC00963-217ENST00000624009 LINC00846Q9NV44 126 aa6.1□□□□□ -1.43
LINC00963-217ENST00000624009 MT2AP02795 61 aa6.09□□□□□ -1.43
LINC00963-217ENST00000624009 CXCL6P80162 114 aa6.07□□□□□ -1.44
LINC00963-217ENST00000624009 C7orf65Q6ZTY9 151 aa6.07□□□□□ -1.44
LINC00963-217ENST00000624009 Q8N9L7 120 aa6.06□□□□□ -1.44
LINC00963-217ENST00000624009 HCG22E2RYF7 251 aa6.05□□□□□ -1.44
LINC00963-217ENST00000624009 Q5W150 140 aa6.05□□□□□ -1.44
LINC00963-217ENST00000624009 MT1FP04733 61 aa6.03□□□□□ -1.44
LINC00963-217ENST00000624009 USH2AO75445 5202 aa6.03□□□□□ -1.44
LINC00963-217ENST00000624009 ETDBQ3ZM63 59 aa6.02□□□□□ -1.45
LINC00963-217ENST00000624009 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
LINC00963-217ENST00000624009 IGKV2D-30A0A075B6S6 120 aa6.01□□□□□ -1.45
LINC00963-217ENST00000624009 IGKV2-30P06310 120 aa6.01□□□□□ -1.45
LINC00963-217ENST00000624009 PCP4L1A6NKN8 68 aa6□□□□□ -1.45
LINC00963-217ENST00000624009 KRTAP10-10P60014 251 aa6□□□□□ -1.45
LINC00963-217ENST00000624009 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
LINC00963-217ENST00000624009 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
LINC00963-217ENST00000624009 TP53AIP1Q9HCN2 124 aa5.99□□□□□ -1.45
LINC00963-217ENST00000624009 ACYP1P07311 99 aa5.96□□□□□ -1.46
LINC00963-217ENST00000624009 FAM240AA0A1B0GVK7 77 aa5.95□□□□□ -1.46
LINC00963-217ENST00000624009 ATP5EP2Q5VTU8 51 aa5.92□□□□□ -1.46
LINC00963-217ENST00000624009 C4orf26Q17RF5 130 aa5.9□□□□□ -1.46
LINC00963-217ENST00000624009 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
LINC00963-217ENST00000624009 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
LINC00963-217ENST00000624009 TRAV22A0A0B4J277 110 aa5.82□□□□□ -1.48
LINC00963-217ENST00000624009 C1orf64Q8NEQ6 169 aa5.82□□□□□ -1.48
LINC00963-217ENST00000624009 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
LINC00963-217ENST00000624009 CYP4F30PQ9H0H9 118 aa5.81□□□□□ -1.48
LINC00963-217ENST00000624009 S4R3F8 94 aa5.8□□□□□ -1.48
LINC00963-217ENST00000624009 LINC00643Q86TS7 51 aa5.79□□□□□ -1.48
LINC00963-217ENST00000624009 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
LINC00963-217ENST00000624009 ATOX1O00244 68 aa5.78□□□□□ -1.48
LINC00963-217ENST00000624009 UQCRQO14949 82 aa5.78□□□□□ -1.48
LINC00963-217ENST00000624009 CSAG1Q6PB30 78 aa5.78□□□□□ -1.48
LINC00963-217ENST00000624009 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.77□□□□□ -1.49
LINC00963-217ENST00000624009 HIST1H4AP62805 103 aaKnown RBP5.77□□□□□ -1.49
LINC00963-217ENST00000624009 KRTAP19-6Q3LI70 58 aa5.77□□□□□ -1.49
LINC00963-217ENST00000624009 C5orf47Q569G3 176 aa5.75□□□□□ -1.49
LINC00963-217ENST00000624009 LCA10Q71F78 164 aa5.75□□□□□ -1.49
LINC00963-217ENST00000624009 A0A1B0GV90 55 aa5.7□□□□□ -1.5
LINC00963-217ENST00000624009 H0Y9P7 68 aa5.7□□□□□ -1.5
LINC00963-217ENST00000624009 J3QR89 54 aa5.7□□□□□ -1.5
LINC00963-217ENST00000624009 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
LINC00963-217ENST00000624009 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
LINC00963-217ENST00000624009 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms