RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 KRTAP16-1A8MUX0 517 aa8.08□□□□□ -1.12
CD99-211ENST00000623253 KRTAP9-3Q9BYQ3 159 aa8.07□□□□□ -1.12
CD99-211ENST00000623253 RBM12B-AS1Q9P1G2 102 aa8.07□□□□□ -1.12
CD99-211ENST00000623253 CCKP06307 115 aa8.06□□□□□ -1.12
CD99-211ENST00000623253 UBE2V1Q13404 147 aa8.06□□□□□ -1.12
CD99-211ENST00000623253 MACF1Q9UPN3 7388 aaKnown RBP8.06□□□□□ -1.12
CD99-211ENST00000623253 TRACP01848 142 aa8.05□□□□□ -1.12
CD99-211ENST00000623253 UQCR10Q9UDW1 63 aa8.05□□□□□ -1.12
CD99-211ENST00000623253 LINC00472Q9H8W2 130 aa8.04□□□□□ -1.12
CD99-211ENST00000623253 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.13
CD99-211ENST00000623253 HRES1P13985 223 aa8.01□□□□□ -1.13
CD99-211ENST00000623253 DEFB116Q30KQ4 102 aa8.01□□□□□ -1.13
CD99-211ENST00000623253 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
CD99-211ENST00000623253 SCGB1C2P0DMR2 95 aa8□□□□□ -1.13
CD99-211ENST00000623253 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
CD99-211ENST00000623253 MPLKIPQ8TAP9 179 aa7.99□□□□□ -1.13
CD99-211ENST00000623253 RBM3P98179 157 aaKnown RBP7.98□□□□□ -1.13
CD99-211ENST00000623253 VPS25Q9BRG1 176 aa7.98□□□□□ -1.13
CD99-211ENST00000623253 LINC00846Q9NV44 126 aa7.98□□□□□ -1.13
CD99-211ENST00000623253 DSCR8Q96T75 97 aa7.97□□□□□ -1.13
CD99-211ENST00000623253 C8orf87E5RJ46 101 aa7.95□□□□□ -1.14
CD99-211ENST00000623253 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
CD99-211ENST00000623253 MTURNQ8N3F0 131 aa7.93□□□□□ -1.14
CD99-211ENST00000623253 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
CD99-211ENST00000623253 C9JAW5 83 aa7.91□□□□□ -1.14
CD99-211ENST00000623253 J3KT08 172 aa7.9□□□□□ -1.14
CD99-211ENST00000623253 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
CD99-211ENST00000623253 Q6ZQT0 140 aa7.87□□□□□ -1.15
CD99-211ENST00000623253 M0R143 59 aa7.85□□□□□ -1.15
CD99-211ENST00000623253 ATXN8Q156A1 80 aa7.85□□□□□ -1.15
CD99-211ENST00000623253 ZCCHC13Q8WW36 166 aaKnown RBP7.85□□□□□ -1.15
CD99-211ENST00000623253 JMJD7-PLA2G4BH0Y9G9 81 aa7.84□□□□□ -1.15
CD99-211ENST00000623253 NDUFB1O75438 58 aa7.84□□□□□ -1.15
CD99-211ENST00000623253 A0A1B0GW54 56 aa7.82□□□□□ -1.16
CD99-211ENST00000623253 SPINK7P58062 85 aa7.82□□□□□ -1.16
CD99-211ENST00000623253 LOC110117498A0A087WWA1 95 aa7.81□□□□□ -1.16
CD99-211ENST00000623253 PDE6GP18545 87 aa7.8□□□□□ -1.16
CD99-211ENST00000623253 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
CD99-211ENST00000623253 NAA38Q9BRA0 125 aaKnown RBP7.8□□□□□ -1.16
CD99-211ENST00000623253 A8MWP4 228 aa7.79□□□□□ -1.16
CD99-211ENST00000623253 KRTAP23-1A1A580 65 aa7.78□□□□□ -1.16
CD99-211ENST00000623253 C8orf17Q9NRJ1 99 aa7.78□□□□□ -1.16
CD99-211ENST00000623253 PCP4P48539 62 aa7.77□□□□□ -1.17
CD99-211ENST00000623253 KRTAP6-3Q3LI67 103 aa7.75□□□□□ -1.17
CD99-211ENST00000623253 LYRM7Q5U5X0 104 aa7.75□□□□□ -1.17
CD99-211ENST00000623253 IGKV3D-7A0A0C4DH55 119 aa7.74□□□□□ -1.17
CD99-211ENST00000623253 WFDC13Q8IUB5 93 aa7.74□□□□□ -1.17
CD99-211ENST00000623253 C14orf132Q9NPU4 83 aa7.74□□□□□ -1.17
CD99-211ENST00000623253 Q6ZVQ6 151 aa7.72□□□□□ -1.17
CD99-211ENST00000623253 PRR15Q8IV56 129 aa7.71□□□□□ -1.18
CD99-211ENST00000623253 SMIM6P0DI80 62 aa7.7□□□□□ -1.18
CD99-211ENST00000623253 NREPQ16612 68 aa7.7□□□□□ -1.18
CD99-211ENST00000623253 TMEM254Q8TBM7 123 aa7.65□□□□□ -1.18
CD99-211ENST00000623253 MMP24-AS1A0A0U1RRL7 71 aa7.64□□□□□ -1.19
CD99-211ENST00000623253 TSTD3H0UI37 97 aa7.64□□□□□ -1.19
CD99-211ENST00000623253 BATFQ16520 125 aa7.64□□□□□ -1.19
CD99-211ENST00000623253 MRPL34Q9BQ48 92 aaKnown RBP7.64□□□□□ -1.19
CD99-211ENST00000623253 H3BT86 120 aa7.61□□□□□ -1.19
CD99-211ENST00000623253 hDV103S1A0JD37 113 aa7.6□□□□□ -1.19
CD99-211ENST00000623253 K7EQZ3 153 aa7.59□□□□□ -1.19
CD99-211ENST00000623253 NDUFS5O43920 106 aa7.58□□□□□ -1.2
CD99-211ENST00000623253 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
CD99-211ENST00000623253 BPY2O14599 106 aa7.56□□□□□ -1.2
CD99-211ENST00000623253 NEBP20929 6669 aa7.55□□□□□ -1.2
CD99-211ENST00000623253 A0A1W2PPM0 123 aa7.55□□□□□ -1.2
CD99-211ENST00000623253 TAX1BP3O14907 124 aa7.54□□□□□ -1.2
CD99-211ENST00000623253 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
CD99-211ENST00000623253 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
CD99-211ENST00000623253 C7orf65Q6ZTY9 151 aa7.49□□□□□ -1.21
CD99-211ENST00000623253 Q5W150 140 aa7.48□□□□□ -1.21
CD99-211ENST00000623253 CASC2Q6XLA1 102 aa7.46□□□□□ -1.22
CD99-211ENST00000623253 A6NN06 94 aa7.45□□□□□ -1.22
CD99-211ENST00000623253 Q8N9L7 120 aa7.45□□□□□ -1.22
CD99-211ENST00000623253 HCG22E2RYF7 251 aa7.44□□□□□ -1.22
CD99-211ENST00000623253 SPCS1Q9Y6A9 102 aa7.44□□□□□ -1.22
CD99-211ENST00000623253 LOC105371267A0A1B0GV96 52 aa7.43□□□□□ -1.22
CD99-211ENST00000623253 KRTAP19-4Q3LI73 84 aa7.43□□□□□ -1.22
CD99-211ENST00000623253 MUC12Q9UKN1 5478 aa7.42□□□□□ -1.22
CD99-211ENST00000623253 CXCL6P80162 114 aa7.41□□□□□ -1.22
CD99-211ENST00000623253 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
CD99-211ENST00000623253 A0A0A0MQY5 61 aa7.39□□□□□ -1.23
CD99-211ENST00000623253 FAM236AA0A1B0GUQ0 79 aa7.39□□□□□ -1.23
CD99-211ENST00000623253 FAM236BA0A1B0GV22 79 aa7.39□□□□□ -1.23
CD99-211ENST00000623253 KRTAP20-1Q3LI63 56 aa7.38□□□□□ -1.23
CD99-211ENST00000623253 C4orf26Q17RF5 130 aa7.37□□□□□ -1.23
CD99-211ENST00000623253 UBL5Q9BZL1 73 aa7.37□□□□□ -1.23
CD99-211ENST00000623253 C5orf47Q569G3 176 aa7.35□□□□□ -1.23
CD99-211ENST00000623253 Q5VV11 94 aa7.35□□□□□ -1.23
CD99-211ENST00000623253 MT1BP07438 61 aa7.33□□□□□ -1.24
CD99-211ENST00000623253 PRO0461Q9UI25 63 aa7.33□□□□□ -1.24
CD99-211ENST00000623253 COL5A1-AS1Q5SY13 56 aa7.32□□□□□ -1.24
CD99-211ENST00000623253 K7EP34 96 aa7.29□□□□□ -1.24
CD99-211ENST00000623253 S4R3F8 94 aa7.25□□□□□ -1.25
CD99-211ENST00000623253 KRTAP10-5P60370 271 aa7.24□□□□□ -1.25
CD99-211ENST00000623253 KRTAP19-8Q3LI54 63 aa7.24□□□□□ -1.25
CD99-211ENST00000623253 SPRR2GQ9BYE4 73 aa7.24□□□□□ -1.25
CD99-211ENST00000623253 TP53AIP1Q9HCN2 124 aa7.24□□□□□ -1.25
CD99-211ENST00000623253 C1orf64Q8NEQ6 169 aa7.23□□□□□ -1.25
CD99-211ENST00000623253 CSAG1Q6PB30 78 aa7.22□□□□□ -1.25
CD99-211ENST00000623253 KRTAP5-9P26371 169 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms