RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 NOTCH2NLQ7Z3S9 236 aa9.55□□□□□ -0.88
GABRB3-215ENST00000622697 NIPBLQ6KC79 2804 aaeCLIP9.52□□□□□ -0.89
GABRB3-215ENST00000622697 Q6ZSA8 131 aa9.49□□□□□ -0.89
GABRB3-215ENST00000622697 Q6ZR54 194 aa9.46□□□□□ -0.89
GABRB3-215ENST00000622697 MUC3AQ02505 3323 aa9.46□□□□□ -0.89
GABRB3-215ENST00000622697 KMT2BQ9UMN6 2715 aaPredicted RBP9.45□□□□□ -0.9
GABRB3-215ENST00000622697 CSMD1Q96PZ7 3565 aa9.43□□□□□ -0.9
GABRB3-215ENST00000622697 DMAC1Q96GE9 116 aa9.41□□□□□ -0.9
GABRB3-215ENST00000622697 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
GABRB3-215ENST00000622697 Q6ZRN7 208 aaPredicted RBP9.41□□□□□ -0.9
GABRB3-215ENST00000622697 SMG1Q96Q15 3661 aaKnown RBP9.38□□□□□ -0.91
GABRB3-215ENST00000622697 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
GABRB3-215ENST00000622697 S4R3F8 94 aa9.36□□□□□ -0.91
GABRB3-215ENST00000622697 MXRA5Q9NR99 2828 aa9.33□□□□□ -0.92
GABRB3-215ENST00000622697 Q5VSD8 79 aa9.31□□□□□ -0.92
GABRB3-215ENST00000622697 FLG2Q5D862 2391 aaPredicted RBP9.31□□□□□ -0.92
GABRB3-215ENST00000622697 LCE6AA0A183 80 aa9.29□□□□□ -0.92
GABRB3-215ENST00000622697 TENM4Q6N022 2769 aa9.29□□□□□ -0.92
GABRB3-215ENST00000622697 KRTAP13-1Q8IUC0 172 aa9.28□□□□□ -0.92
GABRB3-215ENST00000622697 SPATA8Q6RVD6 105 aa9.24□□□□□ -0.93
GABRB3-215ENST00000622697 CAMK2N1Q7Z7J9 78 aa9.24□□□□□ -0.93
GABRB3-215ENST00000622697 A8MU10 97 aa9.23□□□□□ -0.93
GABRB3-215ENST00000622697 KRTAP13-2Q52LG2 175 aa9.22□□□□□ -0.93
GABRB3-215ENST00000622697 SVEP1Q4LDE5 3571 aa9.22□□□□□ -0.93
GABRB3-215ENST00000622697 H1FX-AS1Q4G0G2 97 aa9.2□□□□□ -0.94
GABRB3-215ENST00000622697 CELSR1Q9NYQ6 3014 aa9.19□□□□□ -0.94
GABRB3-215ENST00000622697 ASB16-AS1Q495Z4 193 aa9.14□□□□□ -0.95
GABRB3-215ENST00000622697 RPL37P61927 97 aaKnown RBP9.14□□□□□ -0.95
GABRB3-215ENST00000622697 R4GN34 69 aa9.13□□□□□ -0.95
GABRB3-215ENST00000622697 M0R2T5 61 aa9.11□□□□□ -0.95
GABRB3-215ENST00000622697 CUBNO60494 3623 aa9.08□□□□□ -0.96
GABRB3-215ENST00000622697 ROMO1P60602 79 aa9.06□□□□□ -0.96
GABRB3-215ENST00000622697 ADM2Q7Z4H4 148 aa9.05□□□□□ -0.96
GABRB3-215ENST00000622697 A6NN06 94 aa9.05□□□□□ -0.96
GABRB3-215ENST00000622697 LUZP6Q538Z0 58 aa9.05□□□□□ -0.96
GABRB3-215ENST00000622697 M0QZ58 72 aa9.03□□□□□ -0.96
GABRB3-215ENST00000622697 TENM3Q9P273 2699 aa9.03□□□□□ -0.96
GABRB3-215ENST00000622697 H3BS24 57 aa9.01□□□□□ -0.97
GABRB3-215ENST00000622697 SEC61BP60468 96 aaKnown RBP9.01□□□□□ -0.97
GABRB3-215ENST00000622697 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
GABRB3-215ENST00000622697 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
GABRB3-215ENST00000622697 SPENQ96T58 3664 aaKnown RBP8.9□□□□□ -0.98
GABRB3-215ENST00000622697 TENM1Q9UKZ4 2725 aa8.9□□□□□ -0.98
GABRB3-215ENST00000622697 CSMD2Q7Z408 3487 aa8.83□□□□□ -1
GABRB3-215ENST00000622697 FBN1P35555 2871 aaKnown RBP8.83□□□□□ -1
GABRB3-215ENST00000622697 PDZD2O15018 2839 aa8.83□□□□□ -1
GABRB3-215ENST00000622697 KRTAP1-4P0C5Y4 121 aa8.81□□□□□ -1
GABRB3-215ENST00000622697 VWFP04275 2813 aa8.8□□□□□ -1
GABRB3-215ENST00000622697 PKD1L1Q8TDX9 2849 aa8.8□□□□□ -1
GABRB3-215ENST00000622697 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
GABRB3-215ENST00000622697 TENM2Q9NT68 2774 aa8.77□□□□□ -1.01
GABRB3-215ENST00000622697 A8MUU9 505 aa8.75□□□□□ -1.01
GABRB3-215ENST00000622697 ZFHX3Q15911 3703 aa8.75□□□□□ -1.01
GABRB3-215ENST00000622697 C20orf166-AS1Q96NR2 134 aa8.73□□□□□ -1.01
GABRB3-215ENST00000622697 TGP01266 2768 aa8.7□□□□□ -1.02
GABRB3-215ENST00000622697 BSNQ9UPA5 3926 aa8.67□□□□□ -1.02
GABRB3-215ENST00000622697 OTOGQ6ZRI0 2925 aa8.65□□□□□ -1.02
GABRB3-215ENST00000622697 KRTAP16-1A8MUX0 517 aa8.62□□□□□ -1.03
GABRB3-215ENST00000622697 PLAC4Q8WY50 150 aa8.59□□□□□ -1.04
GABRB3-215ENST00000622697 A0A0A0MQY5 61 aa8.55□□□□□ -1.04
GABRB3-215ENST00000622697 XP32Q5T750 250 aa8.55□□□□□ -1.04
GABRB3-215ENST00000622697 H0YAA0 97 aa8.55□□□□□ -1.04
GABRB3-215ENST00000622697 TRRAPQ9Y4A5 3859 aa8.51□□□□□ -1.05
GABRB3-215ENST00000622697 ANK3Q12955 4377 aaKnown RBP8.5□□□□□ -1.05
GABRB3-215ENST00000622697 C10orf95Q9H7T3 257 aa8.48□□□□□ -1.05
GABRB3-215ENST00000622697 KRTAP21-3Q3LHN1 58 aa8.47□□□□□ -1.05
GABRB3-215ENST00000622697 NDUFAF8A1L188 74 aa8.47□□□□□ -1.05
GABRB3-215ENST00000622697 KRTAP13-3Q3SY46 172 aa8.43□□□□□ -1.06
GABRB3-215ENST00000622697 VPS13CQ709C8 3753 aa8.39□□□□□ -1.07
GABRB3-215ENST00000622697 P0C880 135 aa8.33□□□□□ -1.08
GABRB3-215ENST00000622697 FBN3Q75N90 2809 aa8.32□□□□□ -1.08
GABRB3-215ENST00000622697 A0A1B0GVY2 172 aa8.32□□□□□ -1.08
GABRB3-215ENST00000622697 TNP1P09430 55 aa8.26□□□□□ -1.09
GABRB3-215ENST00000622697 SRRM2Q9UQ35 2752 aaKnown RBP8.26□□□□□ -1.09
GABRB3-215ENST00000622697 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
GABRB3-215ENST00000622697 KRTAP10-8P60410 259 aa8.15□□□□□ -1.1
GABRB3-215ENST00000622697 MEGF8Q7Z7M0 2845 aa8.14□□□□□ -1.11
GABRB3-215ENST00000622697 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
GABRB3-215ENST00000622697 COL7A1Q02388 2944 aa8.06□□□□□ -1.12
GABRB3-215ENST00000622697 ZNF469Q96JG9 3925 aaPredicted RBP8.05□□□□□ -1.12
GABRB3-215ENST00000622697 KRTAP12-2P59991 146 aa8.03□□□□□ -1.12
GABRB3-215ENST00000622697 CSMD3Q7Z407 3707 aa8.03□□□□□ -1.12
GABRB3-215ENST00000622697 PP632Q6XCG6 107 aa8□□□□□ -1.13
GABRB3-215ENST00000622697 HUWE1Q7Z6Z7 4374 aaKnown RBP7.96□□□□□ -1.14
GABRB3-215ENST00000622697 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
GABRB3-215ENST00000622697 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
GABRB3-215ENST00000622697 AKAP9Q99996 3911 aa7.85□□□□□ -1.15
GABRB3-215ENST00000622697 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
GABRB3-215ENST00000622697 KRTAP10-6P60371 365 aaPredicted RBP7.78□□□□□ -1.16
GABRB3-215ENST00000622697 MT1HL1P0DM35 61 aa7.59□□□□□ -1.19
GABRB3-215ENST00000622697 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
GABRB3-215ENST00000622697 PRO2289Q9P1D8 64 aa7.57□□□□□ -1.2
GABRB3-215ENST00000622697 DNAH9Q9NYC9 4486 aa7.56□□□□□ -1.2
GABRB3-215ENST00000622697 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
GABRB3-215ENST00000622697 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
GABRB3-215ENST00000622697 DNAH10Q8IVF4 4471 aa7.48□□□□□ -1.21
GABRB3-215ENST00000622697 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.21
GABRB3-215ENST00000622697 DNAH1Q9P2D7 4330 aa7.45□□□□□ -1.22
GABRB3-215ENST00000622697 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
GABRB3-215ENST00000622697 DNAH5Q8TE73 4624 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms