RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CIRBP-AS1Q8TBR5 109 aa5.61□□□□□ -1.51
IGHV3-54-201ENST00000622166 DNAH6Q9C0G6 4158 aa5.6□□□□□ -1.51
IGHV3-54-201ENST00000622166 LYSTQ99698 3801 aa5.6□□□□□ -1.51
IGHV3-54-201ENST00000622166 LY6G6CO95867 125 aa5.6□□□□□ -1.51
IGHV3-54-201ENST00000622166 KRTAP10-2P60368 255 aa5.59□□□□□ -1.51
IGHV3-54-201ENST00000622166 SPINK6Q6UWN8 80 aa5.59□□□□□ -1.51
IGHV3-54-201ENST00000622166 Q6ZSA8 131 aa5.59□□□□□ -1.51
IGHV3-54-201ENST00000622166 DNAH8Q96JB1 4490 aa5.59□□□□□ -1.52
IGHV3-54-201ENST00000622166 STARD9Q9P2P6 4700 aa5.58□□□□□ -1.52
IGHV3-54-201ENST00000622166 Q5W150 140 aa5.58□□□□□ -1.52
IGHV3-54-201ENST00000622166 PRKDCP78527 4128 aaKnown RBP5.58□□□□□ -1.52
IGHV3-54-201ENST00000622166 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
IGHV3-54-201ENST00000622166 HRES1P13985 223 aa5.57□□□□□ -1.52
IGHV3-54-201ENST00000622166 Q75L30 129 aa5.57□□□□□ -1.52
IGHV3-54-201ENST00000622166 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
IGHV3-54-201ENST00000622166 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
IGHV3-54-201ENST00000622166 KRTAP13-2Q52LG2 175 aa5.56□□□□□ -1.52
IGHV3-54-201ENST00000622166 HECTD4Q9Y4D8 3996 aa5.56□□□□□ -1.52
IGHV3-54-201ENST00000622166 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
IGHV3-54-201ENST00000622166 LINC00313P59037 77 aa5.54□□□□□ -1.52
IGHV3-54-201ENST00000622166 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
IGHV3-54-201ENST00000622166 FBN3Q75N90 2809 aa5.52□□□□□ -1.53
IGHV3-54-201ENST00000622166 FAM229AH3BQW9 127 aa5.52□□□□□ -1.53
IGHV3-54-201ENST00000622166 KRTAP16-1A8MUX0 517 aa5.51□□□□□ -1.53
IGHV3-54-201ENST00000622166 KRTAP1-4P0C5Y4 121 aa5.51□□□□□ -1.53
IGHV3-54-201ENST00000622166 DNHD1Q96M86 4753 aa5.51□□□□□ -1.53
IGHV3-54-201ENST00000622166 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
IGHV3-54-201ENST00000622166 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
IGHV3-54-201ENST00000622166 ACYP2P14621 99 aa5.49□□□□□ -1.53
IGHV3-54-201ENST00000622166 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
IGHV3-54-201ENST00000622166 SPAG11AQ6PDA7 123 aa5.48□□□□□ -1.53
IGHV3-54-201ENST00000622166 LCA10Q71F78 164 aa5.47□□□□□ -1.53
IGHV3-54-201ENST00000622166 A8MU10 97 aa5.46□□□□□ -1.54
IGHV3-54-201ENST00000622166 A6NED7 52 aa5.45□□□□□ -1.54
IGHV3-54-201ENST00000622166 ATP11AUNQ6ZP68 121 aa5.45□□□□□ -1.54
IGHV3-54-201ENST00000622166 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
IGHV3-54-201ENST00000622166 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
IGHV3-54-201ENST00000622166 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
IGHV3-54-201ENST00000622166 MEGF8Q7Z7M0 2845 aa5.44□□□□□ -1.54
IGHV3-54-201ENST00000622166 SPINK1P00995 79 aa5.43□□□□□ -1.54
IGHV3-54-201ENST00000622166 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
IGHV3-54-201ENST00000622166 KMT2AQ03164 3969 aa5.43□□□□□ -1.54
IGHV3-54-201ENST00000622166 C4orf48Q5BLP8 95 aa5.42□□□□□ -1.54
IGHV3-54-201ENST00000622166 TYMSOSQ8TAI1 123 aa5.42□□□□□ -1.54
IGHV3-54-201ENST00000622166 PLA2G1BP04054 148 aaKnown RBP5.41□□□□□ -1.54
IGHV3-54-201ENST00000622166 RPS29P62273 56 aaKnown RBP5.41□□□□□ -1.54
IGHV3-54-201ENST00000622166 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
IGHV3-54-201ENST00000622166 SPINK7P58062 85 aa5.4□□□□□ -1.54
IGHV3-54-201ENST00000622166 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.54
IGHV3-54-201ENST00000622166 KRTAP21-3Q3LHN1 58 aa5.39□□□□□ -1.55
IGHV3-54-201ENST00000622166 TGP01266 2768 aa5.39□□□□□ -1.55
IGHV3-54-201ENST00000622166 FRAS1Q86XX4 4008 aa5.38□□□□□ -1.55
IGHV3-54-201ENST00000622166 A6NN06 94 aa5.37□□□□□ -1.55
IGHV3-54-201ENST00000622166 PKD1P98161 4303 aa5.37□□□□□ -1.55
IGHV3-54-201ENST00000622166 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
IGHV3-54-201ENST00000622166 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
IGHV3-54-201ENST00000622166 LINC00304Q8N9R0 145 aa5.35□□□□□ -1.55
IGHV3-54-201ENST00000622166 SACSQ9NZJ4 4579 aa5.33□□□□□ -1.56
IGHV3-54-201ENST00000622166 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
IGHV3-54-201ENST00000622166 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
IGHV3-54-201ENST00000622166 A0A1B0GU69 56 aa5.31□□□□□ -1.56
IGHV3-54-201ENST00000622166 C7orf65Q6ZTY9 151 aa5.31□□□□□ -1.56
IGHV3-54-201ENST00000622166 FAT2Q9NYQ8 4349 aa5.3□□□□□ -1.56
IGHV3-54-201ENST00000622166 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
IGHV3-54-201ENST00000622166 A0A1B0GVY2 172 aa5.28□□□□□ -1.56
IGHV3-54-201ENST00000622166 A8MUU9 505 aa5.28□□□□□ -1.56
IGHV3-54-201ENST00000622166 KRTAP10-4P60372 401 aaPredicted RBP5.28□□□□□ -1.56
IGHV3-54-201ENST00000622166 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
IGHV3-54-201ENST00000622166 SEC61GP60059 68 aa5.26□□□□□ -1.57
IGHV3-54-201ENST00000622166 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
IGHV3-54-201ENST00000622166 SMR3BP02814 79 aaPredicted RBP5.23□□□□□ -1.57
IGHV3-54-201ENST00000622166 UQCR11O14957 56 aa5.22□□□□□ -1.57
IGHV3-54-201ENST00000622166 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
IGHV3-54-201ENST00000622166 Q8N1X5 172 aa5.21□□□□□ -1.58
IGHV3-54-201ENST00000622166 HYDINQ4G0P3 5121 aa5.2□□□□□ -1.58
IGHV3-54-201ENST00000622166 VPS13BQ7Z7G8 4022 aa5.2□□□□□ -1.58
IGHV3-54-201ENST00000622166 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
IGHV3-54-201ENST00000622166 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
IGHV3-54-201ENST00000622166 RBM12B-AS1Q9P1G2 102 aa5.16□□□□□ -1.58
IGHV3-54-201ENST00000622166 DYNC1H1Q14204 4646 aaKnown RBP5.15□□□□□ -1.59
IGHV3-54-201ENST00000622166 PKHD1L1Q86WI1 4243 aa5.15□□□□□ -1.59
IGHV3-54-201ENST00000622166 APOBP04114 4563 aaKnown RBP5.1□□□□□ -1.59
IGHV3-54-201ENST00000622166 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
IGHV3-54-201ENST00000622166 KRTAP10-8P60410 259 aa5.09□□□□□ -1.59
IGHV3-54-201ENST00000622166 PKHD1P08F94 4074 aa5.07□□□□□ -1.6
IGHV3-54-201ENST00000622166 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
IGHV3-54-201ENST00000622166 A0A1B0GU33 70 aa5.04□□□□□ -1.6
IGHV3-54-201ENST00000622166 H0YAA0 97 aa5.04□□□□□ -1.6
IGHV3-54-201ENST00000622166 H1FX-AS1Q4G0G2 97 aa5.04□□□□□ -1.6
IGHV3-54-201ENST00000622166 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
IGHV3-54-201ENST00000622166 ADM2Q7Z4H4 148 aa5.03□□□□□ -1.6
IGHV3-54-201ENST00000622166 RPL37P61927 97 aaKnown RBP5.02□□□□□ -1.61
IGHV3-54-201ENST00000622166 Q5VSD8 79 aa4.99□□□□□ -1.61
IGHV3-54-201ENST00000622166 FAT1Q14517 4588 aa4.97□□□□□ -1.61
IGHV3-54-201ENST00000622166 XP32Q5T750 250 aa4.96□□□□□ -1.62
IGHV3-54-201ENST00000622166 RYR2Q92736 4967 aa4.96□□□□□ -1.62
IGHV3-54-201ENST00000622166 KRTAP3-3Q9BYR6 98 aa4.94□□□□□ -1.62
IGHV3-54-201ENST00000622166 TNXBP22105 4242 aa4.93□□□□□ -1.62
IGHV3-54-201ENST00000622166 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
IGHV3-54-201ENST00000622166 LINC01554Q52M75 96 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms