RNA–Protein interactions for RNA: ENST00000621976.1

KCNQ3-205, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNQ3, Length 10,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-205ENST00000621976 TACC2O95359 2948 aa3.45□□□□□ -1.86
KCNQ3-205ENST00000621976 PCNTO95613 3336 aa3.44□□□□□ -1.86
KCNQ3-205ENST00000621976 PKD1L1Q8TDX9 2849 aa3.44□□□□□ -1.86
KCNQ3-205ENST00000621976 COL12A1Q99715 3063 aa3.42□□□□□ -1.86
KCNQ3-205ENST00000621976 NBEAQ8NFP9 2946 aa3.41□□□□□ -1.86
KCNQ3-205ENST00000621976 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
KCNQ3-205ENST00000621976 MXRA5Q9NR99 2828 aa3.4□□□□□ -1.86
KCNQ3-205ENST00000621976 KRTAP10-2P60368 255 aa3.4□□□□□ -1.87
KCNQ3-205ENST00000621976 C5orf42Q9H799 3197 aa3.4□□□□□ -1.87
KCNQ3-205ENST00000621976 ZZEF1O43149 2961 aa3.4□□□□□ -1.87
KCNQ3-205ENST00000621976 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
KCNQ3-205ENST00000621976 DMXL2Q8TDJ6 3036 aa3.38□□□□□ -1.87
KCNQ3-205ENST00000621976 EP400Q96L91 3159 aa3.38□□□□□ -1.87
KCNQ3-205ENST00000621976 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
KCNQ3-205ENST00000621976 COL7A1Q02388 2944 aa3.36□□□□□ -1.87
KCNQ3-205ENST00000621976 KRTAP13-2Q52LG2 175 aa3.36□□□□□ -1.87
KCNQ3-205ENST00000621976 PRUNE2Q8WUY3 3088 aa3.36□□□□□ -1.87
KCNQ3-205ENST00000621976 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
KCNQ3-205ENST00000621976 FBN2P35556 2912 aa3.34□□□□□ -1.87
KCNQ3-205ENST00000621976 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
KCNQ3-205ENST00000621976 KRTAP7-1Q8IUC3 87 aa3.31□□□□□ -1.88
KCNQ3-205ENST00000621976 LAMA1P25391 3075 aa3.3□□□□□ -1.88
KCNQ3-205ENST00000621976 ZFHX3Q15911 3703 aa3.3□□□□□ -1.88
KCNQ3-205ENST00000621976 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
KCNQ3-205ENST00000621976 CELSR1Q9NYQ6 3014 aa3.26□□□□□ -1.89
KCNQ3-205ENST00000621976 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
KCNQ3-205ENST00000621976 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
KCNQ3-205ENST00000621976 VPS13AQ96RL7 3174 aa3.25□□□□□ -1.89
KCNQ3-205ENST00000621976 DMXL1Q9Y485 3027 aa3.25□□□□□ -1.89
KCNQ3-205ENST00000621976 WDFY4Q6ZS81 3184 aa3.22□□□□□ -1.89
KCNQ3-205ENST00000621976 HRNRQ86YZ3 2850 aaPredicted RBP3.22□□□□□ -1.89
KCNQ3-205ENST00000621976 MEGF8Q7Z7M0 2845 aa3.22□□□□□ -1.89
KCNQ3-205ENST00000621976 XP32Q5T750 250 aa3.21□□□□□ -1.9
KCNQ3-205ENST00000621976 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
KCNQ3-205ENST00000621976 FREM2Q5SZK8 3169 aa3.18□□□□□ -1.9
KCNQ3-205ENST00000621976 KRTAP10-10P60014 251 aa3.15□□□□□ -1.9
KCNQ3-205ENST00000621976 ATMQ13315 3056 aa3.14□□□□□ -1.91
KCNQ3-205ENST00000621976 OTOGQ6ZRI0 2925 aa3.14□□□□□ -1.91
KCNQ3-205ENST00000621976 BOD1L1Q8NFC6 3051 aa3.14□□□□□ -1.91
KCNQ3-205ENST00000621976 FBN3Q75N90 2809 aa3.13□□□□□ -1.91
KCNQ3-205ENST00000621976 ADGRG4Q8IZF6 3080 aa3.12□□□□□ -1.91
KCNQ3-205ENST00000621976 KRTAP1-4P0C5Y4 121 aa3.11□□□□□ -1.91
KCNQ3-205ENST00000621976 REV3LO60673 3130 aa3.1□□□□□ -1.91
KCNQ3-205ENST00000621976 A0A1B0GVY2 172 aa3.07□□□□□ -1.92
KCNQ3-205ENST00000621976 UTRNP46939 3433 aa3.03□□□□□ -1.92
KCNQ3-205ENST00000621976 HTTP42858 3142 aa3.03□□□□□ -1.92
KCNQ3-205ENST00000621976 XIRP2A4UGR9 3374 aa3.01□□□□□ -1.93
KCNQ3-205ENST00000621976 FBN1P35555 2871 aaKnown RBP3.01□□□□□ -1.93
KCNQ3-205ENST00000621976 KRTAP10-6P60371 365 aaPredicted RBP3□□□□□ -1.93
KCNQ3-205ENST00000621976 GOLGB1Q14789 3259 aaKnown RBP2.99□□□□□ -1.93
KCNQ3-205ENST00000621976 RANBP2P49792 3224 aaKnown RBP2.98□□□□□ -1.93
KCNQ3-205ENST00000621976 KRTAP21-3Q3LHN1 58 aa2.95□□□□□ -1.94
KCNQ3-205ENST00000621976 KRTAP3-1Q9BYR8 98 aa2.92□□□□□ -1.94
KCNQ3-205ENST00000621976 COL6A3P12111 3177 aa2.91□□□□□ -1.94
KCNQ3-205ENST00000621976 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
KCNQ3-205ENST00000621976 ALMS1Q8TCU4 4167 aa2.89□□□□□ -1.95
KCNQ3-205ENST00000621976 MKI67P46013 3256 aaKnown RBP2.87□□□□□ -1.95
KCNQ3-205ENST00000621976 USP34Q70CQ2 3546 aa2.86□□□□□ -1.95
KCNQ3-205ENST00000621976 SPTBN5Q9NRC6 3674 aaKnown RBP2.85□□□□□ -1.95
KCNQ3-205ENST00000621976 KRTAP12-3P60328 96 aa2.84□□□□□ -1.95
KCNQ3-205ENST00000621976 KRTAP3-2Q9BYR7 98 aa2.84□□□□□ -1.95
KCNQ3-205ENST00000621976 NBPF19A0A087WUL8 3843 aa2.84□□□□□ -1.95
KCNQ3-205ENST00000621976 VCANP13611 3396 aa2.81□□□□□ -1.96
KCNQ3-205ENST00000621976 CFAP47Q6ZTR5 3102 aa2.81□□□□□ -1.96
KCNQ3-205ENST00000621976 UNC80Q8N2C7 3258 aa2.79□□□□□ -1.96
KCNQ3-205ENST00000621976 SPEGQ15772 3267 aa2.77□□□□□ -1.97
KCNQ3-205ENST00000621976 KRTAP3-3Q9BYR6 98 aa2.75□□□□□ -1.97
KCNQ3-205ENST00000621976 BRCA2P51587 3418 aa2.75□□□□□ -1.97
KCNQ3-205ENST00000621976 ZFHX4Q86UP3 3567 aa2.74□□□□□ -1.97
KCNQ3-205ENST00000621976 DNAH14Q0VDD8 3507 aa2.74□□□□□ -1.97
KCNQ3-205ENST00000621976 CELSR3Q9NYQ7 3312 aa2.72□□□□□ -1.97
KCNQ3-205ENST00000621976 TRRAPQ9Y4A5 3859 aa2.72□□□□□ -1.97
KCNQ3-205ENST00000621976 AKAP9Q99996 3911 aa2.72□□□□□ -1.97
KCNQ3-205ENST00000621976 SZT2Q5T011 3432 aa2.7□□□□□ -1.98
KCNQ3-205ENST00000621976 CRCT1Q9UGL9 99 aa2.7□□□□□ -1.98
KCNQ3-205ENST00000621976 KRTAP10-5P60370 271 aa2.69□□□□□ -1.98
KCNQ3-205ENST00000621976 KRTAP19-4Q3LI73 84 aa2.68□□□□□ -1.98
KCNQ3-205ENST00000621976 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
KCNQ3-205ENST00000621976 LAMA3Q16787 3333 aa2.66□□□□□ -1.98
KCNQ3-205ENST00000621976 DNAH3Q8TD57 4116 aa2.66□□□□□ -1.98
KCNQ3-205ENST00000621976 MYO15AQ9UKN7 3530 aa2.66□□□□□ -1.98
KCNQ3-205ENST00000621976 BSNQ9UPA5 3926 aa2.66□□□□□ -1.98
KCNQ3-205ENST00000621976 SPENQ96T58 3664 aaKnown RBP2.64□□□□□ -1.99
KCNQ3-205ENST00000621976 DMDP11532 3685 aa2.64□□□□□ -1.99
KCNQ3-205ENST00000621976 MT3P25713 68 aa2.64□□□□□ -1.99
KCNQ3-205ENST00000621976 EYSQ5T1H1 3165 aa2.62□□□□□ -1.99
KCNQ3-205ENST00000621976 LOC400499M0QZD8 3231 aa2.6□□□□□ -1.99
KCNQ3-205ENST00000621976 CMYA5Q8N3K9 4069 aa2.58□□□□□ -2
KCNQ3-205ENST00000621976 CDH23Q9H251 3354 aa2.58□□□□□ -2
KCNQ3-205ENST00000621976 SMG1Q96Q15 3661 aaKnown RBP2.55□□□□□ -2
KCNQ3-205ENST00000621976 ZNF469Q96JG9 3925 aaPredicted RBP2.55□□□□□ -2
KCNQ3-205ENST00000621976 DCHS1Q96JQ0 3298 aa2.53□□□□□ -2
KCNQ3-205ENST00000621976 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2.01
KCNQ3-205ENST00000621976 WDFY3Q8IZQ1 3526 aa2.52□□□□□ -2.01
KCNQ3-205ENST00000621976 VPS13CQ709C8 3753 aa2.51□□□□□ -2.01
KCNQ3-205ENST00000621976 LYSTQ99698 3801 aa2.51□□□□□ -2.01
KCNQ3-205ENST00000621976 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
KCNQ3-205ENST00000621976 ASPMQ8IZT6 3477 aa2.48□□□□□ -2.01
KCNQ3-205ENST00000621976 LAMA5O15230 3695 aa2.45□□□□□ -2.02
KCNQ3-205ENST00000621976 MT1HL1P0DM35 61 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms