RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 DSCR10P59022 87 aa6.07□□□□□ -1.44
CPNE3-212ENST00000621783 HERC2O95714 4834 aa6.07□□□□□ -1.44
CPNE3-212ENST00000621783 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
CPNE3-212ENST00000621783 J3KT08 172 aa6.06□□□□□ -1.44
CPNE3-212ENST00000621783 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
CPNE3-212ENST00000621783 C1orf195Q5TG92 126 aa6.06□□□□□ -1.44
CPNE3-212ENST00000621783 Q8N9L7 120 aa6.05□□□□□ -1.44
CPNE3-212ENST00000621783 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
CPNE3-212ENST00000621783 K7EQZ3 153 aa6.04□□□□□ -1.44
CPNE3-212ENST00000621783 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-212ENST00000621783 TNXBP22105 4242 aa6.04□□□□□ -1.44
CPNE3-212ENST00000621783 A8MWP4 228 aa6.03□□□□□ -1.44
CPNE3-212ENST00000621783 HIST1H4AP62805 103 aaKnown RBP6.02□□□□□ -1.45
CPNE3-212ENST00000621783 KRTAP9-9Q9BYP9 154 aa6.02□□□□□ -1.45
CPNE3-212ENST00000621783 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
CPNE3-212ENST00000621783 IMUPQ9GZP8 106 aa6.02□□□□□ -1.45
CPNE3-212ENST00000621783 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
CPNE3-212ENST00000621783 A0A087WVE0 104 aa6□□□□□ -1.45
CPNE3-212ENST00000621783 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
CPNE3-212ENST00000621783 PRR15Q8IV56 129 aa6□□□□□ -1.45
CPNE3-212ENST00000621783 A0A1B0GVX0 72 aa5.99□□□□□ -1.45
CPNE3-212ENST00000621783 NDUFB1O75438 58 aa5.99□□□□□ -1.45
CPNE3-212ENST00000621783 MYCBP2O75592 4640 aa5.98□□□□□ -1.45
CPNE3-212ENST00000621783 IGHV6-1A0A0B4J1U7 121 aa5.98□□□□□ -1.45
CPNE3-212ENST00000621783 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
CPNE3-212ENST00000621783 MMP24-AS1A0A0U1RRL7 71 aa5.95□□□□□ -1.46
CPNE3-212ENST00000621783 C8orf17Q9NRJ1 99 aa5.95□□□□□ -1.46
CPNE3-212ENST00000621783 FAM236AA0A1B0GUQ0 79 aa5.94□□□□□ -1.46
CPNE3-212ENST00000621783 FAM236BA0A1B0GV22 79 aa5.94□□□□□ -1.46
CPNE3-212ENST00000621783 HCG22E2RYF7 251 aa5.94□□□□□ -1.46
CPNE3-212ENST00000621783 C8orf87E5RJ46 101 aa5.94□□□□□ -1.46
CPNE3-212ENST00000621783 FP248Q71RG6 208 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-212ENST00000621783 NOTCH2NLQ7Z3S9 236 aa5.93□□□□□ -1.46
CPNE3-212ENST00000621783 WFDC13Q8IUB5 93 aa5.93□□□□□ -1.46
CPNE3-212ENST00000621783 ABCA13Q86UQ4 5058 aa5.92□□□□□ -1.46
CPNE3-212ENST00000621783 CASC2Q6XLA1 102 aa5.91□□□□□ -1.46
CPNE3-212ENST00000621783 hDV103S1A0JD37 113 aa5.9□□□□□ -1.46
CPNE3-212ENST00000621783 LINC00313P59037 77 aa5.9□□□□□ -1.46
CPNE3-212ENST00000621783 IGLV7-46A0A075B6I9 117 aa5.89□□□□□ -1.47
CPNE3-212ENST00000621783 SCGB1A1P11684 91 aa5.89□□□□□ -1.47
CPNE3-212ENST00000621783 TMEM254Q8TBM7 123 aa5.89□□□□□ -1.47
CPNE3-212ENST00000621783 C9orf92A6NGG3 77 aa5.88□□□□□ -1.47
CPNE3-212ENST00000621783 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
CPNE3-212ENST00000621783 PRR4Q16378 134 aa5.88□□□□□ -1.47
CPNE3-212ENST00000621783 MRPL34Q9BQ48 92 aaKnown RBP5.87□□□□□ -1.47
CPNE3-212ENST00000621783 DMBT1Q9UGM3 2413 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-212ENST00000621783 ATOX1O00244 68 aa5.85□□□□□ -1.47
CPNE3-212ENST00000621783 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
CPNE3-212ENST00000621783 NDUFS5O43920 106 aa5.82□□□□□ -1.48
CPNE3-212ENST00000621783 OCR1Q9BZK8 76 aa5.82□□□□□ -1.48
CPNE3-212ENST00000621783 TPRXLQ17RH7 258 aa5.81□□□□□ -1.48
CPNE3-212ENST00000621783 Q8N9P0 234 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-212ENST00000621783 SMIM20Q8N5G0 67 aa5.79□□□□□ -1.48
CPNE3-212ENST00000621783 C20orf166-AS1Q96NR2 134 aa5.79□□□□□ -1.48
CPNE3-212ENST00000621783 ANAPC13Q9BS18 74 aa5.79□□□□□ -1.48
CPNE3-212ENST00000621783 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
CPNE3-212ENST00000621783 TRAV7A0A075B6U4 112 aa5.78□□□□□ -1.48
CPNE3-212ENST00000621783 A8MUU9 505 aa5.78□□□□□ -1.48
CPNE3-212ENST00000621783 UQCRQO14949 82 aa5.77□□□□□ -1.49
CPNE3-212ENST00000621783 TP53AIP1Q9HCN2 124 aa5.77□□□□□ -1.49
CPNE3-212ENST00000621783 Q75L30 129 aa5.76□□□□□ -1.49
CPNE3-212ENST00000621783 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
CPNE3-212ENST00000621783 PCLOQ9Y6V0 5065 aa5.74□□□□□ -1.49
CPNE3-212ENST00000621783 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
CPNE3-212ENST00000621783 LCE1DQ5T752 114 aa5.74□□□□□ -1.49
CPNE3-212ENST00000621783 COX7CP15954 63 aa5.73□□□□□ -1.49
CPNE3-212ENST00000621783 Q5W150 140 aa5.73□□□□□ -1.49
CPNE3-212ENST00000621783 TRAV22A0A0B4J277 110 aa5.72□□□□□ -1.49
CPNE3-212ENST00000621783 H0Y9P7 68 aa5.72□□□□□ -1.49
CPNE3-212ENST00000621783 ZCCHC13Q8WW36 166 aaKnown RBP5.72□□□□□ -1.49
CPNE3-212ENST00000621783 C5orf47Q569G3 176 aa5.7□□□□□ -1.5
CPNE3-212ENST00000621783 MP68P56378 58 aa5.68□□□□□ -1.5
CPNE3-212ENST00000621783 CCDC179H3BU77 68 aa5.67□□□□□ -1.5
CPNE3-212ENST00000621783 PCP4P48539 62 aa5.67□□□□□ -1.5
CPNE3-212ENST00000621783 C20orf197Q8N268 126 aa5.67□□□□□ -1.5
CPNE3-212ENST00000621783 A0A0U1RQV1 116 aa5.66□□□□□ -1.5
CPNE3-212ENST00000621783 ATP11AUNQ6ZP68 121 aa5.66□□□□□ -1.5
CPNE3-212ENST00000621783 LINC00208Q96KT6 92 aa5.66□□□□□ -1.5
CPNE3-212ENST00000621783 H3BPC8 53 aa5.65□□□□□ -1.5
CPNE3-212ENST00000621783 SNURFQ9Y675 71 aa5.65□□□□□ -1.5
CPNE3-212ENST00000621783 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
CPNE3-212ENST00000621783 LPAP08519 4548 aa5.64□□□□□ -1.51
CPNE3-212ENST00000621783 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
CPNE3-212ENST00000621783 IGKV2-30P06310 120 aa5.63□□□□□ -1.51
CPNE3-212ENST00000621783 KLKP1Q107X0 134 aa5.63□□□□□ -1.51
CPNE3-212ENST00000621783 PCOTHQ58A44 107 aa5.63□□□□□ -1.51
CPNE3-212ENST00000621783 IGKV2D-30A0A075B6S6 120 aa5.61□□□□□ -1.51
CPNE3-212ENST00000621783 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
CPNE3-212ENST00000621783 C7orf65Q6ZTY9 151 aa5.6□□□□□ -1.51
CPNE3-212ENST00000621783 CYSTM1Q9H1C7 97 aa5.6□□□□□ -1.51
CPNE3-212ENST00000621783 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
CPNE3-212ENST00000621783 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
CPNE3-212ENST00000621783 HERC1Q15751 4861 aa5.56□□□□□ -1.52
CPNE3-212ENST00000621783 SPINK7P58062 85 aa5.56□□□□□ -1.52
CPNE3-212ENST00000621783 H7BZZ5 65 aa5.54□□□□□ -1.52
CPNE3-212ENST00000621783 NDUFC1O43677 76 aa5.54□□□□□ -1.52
CPNE3-212ENST00000621783 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
CPNE3-212ENST00000621783 LRP2P98164 4655 aa5.54□□□□□ -1.52
CPNE3-212ENST00000621783 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
CPNE3-212ENST00000621783 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms