RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 DEFB116Q30KQ4 102 aa5.74□□□□□ -1.49
CPNE3-210ENST00000621245 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
CPNE3-210ENST00000621245 Q6ZVQ6 151 aa5.73□□□□□ -1.49
CPNE3-210ENST00000621245 PRO1854Q9UHT4 67 aa5.73□□□□□ -1.49
CPNE3-210ENST00000621245 K7ERJ3 54 aa5.72□□□□□ -1.49
CPNE3-210ENST00000621245 MT1FP04733 61 aa5.72□□□□□ -1.49
CPNE3-210ENST00000621245 HRES1P13985 223 aa5.72□□□□□ -1.49
CPNE3-210ENST00000621245 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
CPNE3-210ENST00000621245 VAMP8Q9BV40 100 aa5.72□□□□□ -1.49
CPNE3-210ENST00000621245 IGKV4-1P06312 121 aa5.71□□□□□ -1.5
CPNE3-210ENST00000621245 S100A1P23297 94 aa5.71□□□□□ -1.5
CPNE3-210ENST00000621245 TRBV20-1A0A075B6N2 111 aa5.7□□□□□ -1.5
CPNE3-210ENST00000621245 A0A1B0GX51 115 aa5.7□□□□□ -1.5
CPNE3-210ENST00000621245 LINC00313P59037 77 aa5.7□□□□□ -1.5
CPNE3-210ENST00000621245 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
CPNE3-210ENST00000621245 SNCGO76070 127 aa5.68□□□□□ -1.5
CPNE3-210ENST00000621245 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
CPNE3-210ENST00000621245 LINC00472Q9H8W2 130 aa5.68□□□□□ -1.5
CPNE3-210ENST00000621245 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
CPNE3-210ENST00000621245 IGKV2D-30A0A075B6S6 120 aa5.67□□□□□ -1.5
CPNE3-210ENST00000621245 TRBV7-4A0A0J9YYF1 115 aa5.67□□□□□ -1.5
CPNE3-210ENST00000621245 FAM236DA0A1B0GTK5 79 aa5.67□□□□□ -1.5
CPNE3-210ENST00000621245 FAM236CP0DP71 79 aa5.67□□□□□ -1.5
CPNE3-210ENST00000621245 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
CPNE3-210ENST00000621245 IGHV6-1A0A0B4J1U7 121 aa5.66□□□□□ -1.5
CPNE3-210ENST00000621245 ORMDL1Q9P0S3 153 aa5.66□□□□□ -1.5
CPNE3-210ENST00000621245 CCKP06307 115 aa5.64□□□□□ -1.51
CPNE3-210ENST00000621245 DNAL4O96015 105 aa5.63□□□□□ -1.51
CPNE3-210ENST00000621245 PSMB2P49721 201 aa5.63□□□□□ -1.51
CPNE3-210ENST00000621245 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
CPNE3-210ENST00000621245 TRACP01848 142 aa5.62□□□□□ -1.51
CPNE3-210ENST00000621245 HSD52Q0P140 79 aa5.62□□□□□ -1.51
CPNE3-210ENST00000621245 PYY3Q5JQD4 70 aa5.62□□□□□ -1.51
CPNE3-210ENST00000621245 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
CPNE3-210ENST00000621245 A0A1B0GVX0 72 aa5.6□□□□□ -1.51
CPNE3-210ENST00000621245 VPS25Q9BRG1 176 aa5.6□□□□□ -1.51
CPNE3-210ENST00000621245 RBM12B-AS1Q9P1G2 102 aa5.6□□□□□ -1.51
CPNE3-210ENST00000621245 TMEM256-PLSCR3K7ERE1 68 aa5.59□□□□□ -1.51
CPNE3-210ENST00000621245 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
CPNE3-210ENST00000621245 C8orf87E5RJ46 101 aa5.55□□□□□ -1.52
CPNE3-210ENST00000621245 H3BQ85 93 aa5.55□□□□□ -1.52
CPNE3-210ENST00000621245 COX6CP09669 75 aa5.54□□□□□ -1.52
CPNE3-210ENST00000621245 SPINK7P58062 85 aa5.54□□□□□ -1.52
CPNE3-210ENST00000621245 RBM3P98179 157 aaKnown RBP5.53□□□□□ -1.52
CPNE3-210ENST00000621245 Q6ZQT0 140 aa5.51□□□□□ -1.53
CPNE3-210ENST00000621245 DSCR8Q96T75 97 aa5.51□□□□□ -1.53
CPNE3-210ENST00000621245 UQCR10Q9UDW1 63 aa5.51□□□□□ -1.53
CPNE3-210ENST00000621245 BAALC-AS2P0C853 105 aa5.5□□□□□ -1.53
CPNE3-210ENST00000621245 SCGB1C2P0DMR2 95 aa5.5□□□□□ -1.53
CPNE3-210ENST00000621245 NAA38Q9BRA0 125 aaKnown RBP5.5□□□□□ -1.53
CPNE3-210ENST00000621245 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
CPNE3-210ENST00000621245 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
CPNE3-210ENST00000621245 IGKV3D-7A0A0C4DH55 119 aa5.48□□□□□ -1.53
CPNE3-210ENST00000621245 C9JAW5 83 aa5.48□□□□□ -1.53
CPNE3-210ENST00000621245 C8orf17Q9NRJ1 99 aa5.48□□□□□ -1.53
CPNE3-210ENST00000621245 J3KT08 172 aa5.47□□□□□ -1.53
CPNE3-210ENST00000621245 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
CPNE3-210ENST00000621245 A8MWP4 228 aa5.45□□□□□ -1.54
CPNE3-210ENST00000621245 MTURNQ8N3F0 131 aa5.45□□□□□ -1.54
CPNE3-210ENST00000621245 LOC110117498A0A087WWA1 95 aa5.42□□□□□ -1.54
CPNE3-210ENST00000621245 NDUFB1O75438 58 aa5.42□□□□□ -1.54
CPNE3-210ENST00000621245 C14orf132Q9NPU4 83 aa5.42□□□□□ -1.54
CPNE3-210ENST00000621245 MMP24-AS1A0A0U1RRL7 71 aa5.41□□□□□ -1.54
CPNE3-210ENST00000621245 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
CPNE3-210ENST00000621245 ATXN8Q156A1 80 aa5.4□□□□□ -1.54
CPNE3-210ENST00000621245 LYRM7Q5U5X0 104 aa5.4□□□□□ -1.54
CPNE3-210ENST00000621245 PRR15Q8IV56 129 aa5.39□□□□□ -1.55
CPNE3-210ENST00000621245 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
CPNE3-210ENST00000621245 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
CPNE3-210ENST00000621245 JMJD7-PLA2G4BH0Y9G9 81 aa5.37□□□□□ -1.55
CPNE3-210ENST00000621245 NEBP20929 6669 aa5.37□□□□□ -1.55
CPNE3-210ENST00000621245 K7EQZ3 153 aa5.36□□□□□ -1.55
CPNE3-210ENST00000621245 TMEM254Q8TBM7 123 aa5.36□□□□□ -1.55
CPNE3-210ENST00000621245 MRPL34Q9BQ48 92 aaKnown RBP5.36□□□□□ -1.55
CPNE3-210ENST00000621245 H1FX-AS1Q4G0G2 97 aa5.34□□□□□ -1.55
CPNE3-210ENST00000621245 Q5W150 140 aa5.34□□□□□ -1.55
CPNE3-210ENST00000621245 A0A1B0GW54 56 aa5.33□□□□□ -1.56
CPNE3-210ENST00000621245 M0R143 59 aa5.33□□□□□ -1.56
CPNE3-210ENST00000621245 NREPQ16612 68 aa5.33□□□□□ -1.56
CPNE3-210ENST00000621245 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
CPNE3-210ENST00000621245 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
CPNE3-210ENST00000621245 hDV103S1A0JD37 113 aa5.31□□□□□ -1.56
CPNE3-210ENST00000621245 NDUFS5O43920 106 aa5.31□□□□□ -1.56
CPNE3-210ENST00000621245 PDE6GP18545 87 aa5.31□□□□□ -1.56
CPNE3-210ENST00000621245 Q8N9L7 120 aa5.3□□□□□ -1.56
CPNE3-210ENST00000621245 LINC00846Q9NV44 126 aa5.3□□□□□ -1.56
CPNE3-210ENST00000621245 BATFQ16520 125 aa5.27□□□□□ -1.57
CPNE3-210ENST00000621245 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
CPNE3-210ENST00000621245 C4orf26Q17RF5 130 aa5.25□□□□□ -1.57
CPNE3-210ENST00000621245 BPY2O14599 106 aa5.24□□□□□ -1.57
CPNE3-210ENST00000621245 HCG22E2RYF7 251 aa5.22□□□□□ -1.57
CPNE3-210ENST00000621245 H3BT86 120 aa5.22□□□□□ -1.57
CPNE3-210ENST00000621245 TAX1BP3O14907 124 aa5.22□□□□□ -1.57
CPNE3-210ENST00000621245 SMIM6P0DI80 62 aa5.22□□□□□ -1.57
CPNE3-210ENST00000621245 SEC61GP60059 68 aa5.22□□□□□ -1.57
CPNE3-210ENST00000621245 KRTAP20-1Q3LI63 56 aa5.22□□□□□ -1.57
CPNE3-210ENST00000621245 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
CPNE3-210ENST00000621245 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
CPNE3-210ENST00000621245 PCP4L1A6NKN8 68 aa5.21□□□□□ -1.58
CPNE3-210ENST00000621245 MT1BP07438 61 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms