RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
HMGN3-203ENST00000620514 HRES1P13985 223 aa8.63□□□□□ -1.03
HMGN3-203ENST00000620514 KRTAP9-8Q9BYQ0 159 aa8.63□□□□□ -1.03
HMGN3-203ENST00000620514 FAM236DA0A1B0GTK5 79 aa8.61□□□□□ -1.03
HMGN3-203ENST00000620514 M0R143 59 aa8.61□□□□□ -1.03
HMGN3-203ENST00000620514 FAM236CP0DP71 79 aa8.61□□□□□ -1.03
HMGN3-203ENST00000620514 Q6ZQT0 140 aa8.61□□□□□ -1.03
HMGN3-203ENST00000620514 MPLKIPQ8TAP9 179 aa8.61□□□□□ -1.03
HMGN3-203ENST00000620514 ATXN8Q156A1 80 aa8.6□□□□□ -1.03
HMGN3-203ENST00000620514 J3KT08 172 aa8.58□□□□□ -1.04
HMGN3-203ENST00000620514 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
HMGN3-203ENST00000620514 RBM12B-AS1Q9P1G2 102 aa8.57□□□□□ -1.04
HMGN3-203ENST00000620514 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
HMGN3-203ENST00000620514 JMJD7-PLA2G4BH0Y9G9 81 aa8.54□□□□□ -1.04
HMGN3-203ENST00000620514 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
HMGN3-203ENST00000620514 NDUFB1O75438 58 aa8.52□□□□□ -1.05
HMGN3-203ENST00000620514 C14orf132Q9NPU4 83 aa8.52□□□□□ -1.05
HMGN3-203ENST00000620514 USH2AO75445 5202 aa8.51□□□□□ -1.05
HMGN3-203ENST00000620514 MT2AP02795 61 aa8.51□□□□□ -1.05
HMGN3-203ENST00000620514 SMIM6P0DI80 62 aa8.51□□□□□ -1.05
HMGN3-203ENST00000620514 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
HMGN3-203ENST00000620514 IGKV3D-7A0A0C4DH55 119 aa8.49□□□□□ -1.05
HMGN3-203ENST00000620514 A8MWP4 228 aa8.49□□□□□ -1.05
HMGN3-203ENST00000620514 Q8N9P0 234 aaPredicted RBP8.49□□□□□ -1.05
HMGN3-203ENST00000620514 A0A1B0GW54 56 aa8.48□□□□□ -1.05
HMGN3-203ENST00000620514 SPINK7P58062 85 aa8.48□□□□□ -1.05
HMGN3-203ENST00000620514 PDE6GP18545 87 aa8.47□□□□□ -1.05
HMGN3-203ENST00000620514 BATFQ16520 125 aa8.47□□□□□ -1.05
HMGN3-203ENST00000620514 SSPOA2VEC9 5147 aa8.46□□□□□ -1.06
HMGN3-203ENST00000620514 MT1FP04733 61 aa8.45□□□□□ -1.06
HMGN3-203ENST00000620514 LYRM7Q5U5X0 104 aa8.45□□□□□ -1.06
HMGN3-203ENST00000620514 LOC100996750A0A140TA64 210 aa8.43□□□□□ -1.06
HMGN3-203ENST00000620514 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
HMGN3-203ENST00000620514 NREPQ16612 68 aa8.42□□□□□ -1.06
HMGN3-203ENST00000620514 Q6ZVQ6 151 aa8.42□□□□□ -1.06
HMGN3-203ENST00000620514 TSTD3H0UI37 97 aa8.41□□□□□ -1.06
HMGN3-203ENST00000620514 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
HMGN3-203ENST00000620514 MTURNQ8N3F0 131 aa8.41□□□□□ -1.06
HMGN3-203ENST00000620514 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
HMGN3-203ENST00000620514 MMP24-AS1A0A0U1RRL7 71 aa8.37□□□□□ -1.07
HMGN3-203ENST00000620514 C9orf118A6NHY6 69 aa8.37□□□□□ -1.07
HMGN3-203ENST00000620514 WFDC13Q8IUB5 93 aa8.37□□□□□ -1.07
HMGN3-203ENST00000620514 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
HMGN3-203ENST00000620514 KRTAP9-3Q9BYQ3 159 aa8.36□□□□□ -1.07
HMGN3-203ENST00000620514 H3BT86 120 aa8.34□□□□□ -1.07
HMGN3-203ENST00000620514 TMEM254Q8TBM7 123 aa8.34□□□□□ -1.07
HMGN3-203ENST00000620514 MRPL34Q9BQ48 92 aaKnown RBP8.34□□□□□ -1.07
HMGN3-203ENST00000620514 A0A1W2PPM0 123 aa8.33□□□□□ -1.08
HMGN3-203ENST00000620514 K7EQZ3 153 aa8.33□□□□□ -1.08
HMGN3-203ENST00000620514 LOC105371267A0A1B0GV96 52 aa8.32□□□□□ -1.08
HMGN3-203ENST00000620514 hDV103S1A0JD37 113 aa8.3□□□□□ -1.08
HMGN3-203ENST00000620514 NDUFS5O43920 106 aa8.27□□□□□ -1.09
HMGN3-203ENST00000620514 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.26□□□□□ -1.09
HMGN3-203ENST00000620514 BPY2O14599 106 aa8.26□□□□□ -1.09
HMGN3-203ENST00000620514 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
HMGN3-203ENST00000620514 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
HMGN3-203ENST00000620514 Q5W150 140 aa8.22□□□□□ -1.09
HMGN3-203ENST00000620514 Q8N9L7 120 aa8.22□□□□□ -1.09
HMGN3-203ENST00000620514 SPCS1Q9Y6A9 102 aa8.21□□□□□ -1.1
HMGN3-203ENST00000620514 IGKV2D-30A0A075B6S6 120 aa8.19□□□□□ -1.1
HMGN3-203ENST00000620514 IGKV2-30P06310 120 aa8.19□□□□□ -1.1
HMGN3-203ENST00000620514 H1FX-AS1Q4G0G2 97 aa8.18□□□□□ -1.1
HMGN3-203ENST00000620514 KRTAP9-7A8MTY7 169 aa8.17□□□□□ -1.1
HMGN3-203ENST00000620514 CASC2Q6XLA1 102 aa8.16□□□□□ -1.1
HMGN3-203ENST00000620514 HCG22E2RYF7 251 aa8.14□□□□□ -1.11
HMGN3-203ENST00000620514 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
HMGN3-203ENST00000620514 PRO0461Q9UI25 63 aa8.12□□□□□ -1.11
HMGN3-203ENST00000620514 LINC00846Q9NV44 126 aa8.1□□□□□ -1.11
HMGN3-203ENST00000620514 COL5A1-AS1Q5SY13 56 aa8.08□□□□□ -1.12
HMGN3-203ENST00000620514 K7EP34 96 aa8.06□□□□□ -1.12
HMGN3-203ENST00000620514 C4orf26Q17RF5 130 aa8.06□□□□□ -1.12
HMGN3-203ENST00000620514 CXCL6P80162 114 aa8.05□□□□□ -1.12
HMGN3-203ENST00000620514 UBL5Q9BZL1 73 aa8.05□□□□□ -1.12
HMGN3-203ENST00000620514 KRTAP19-6Q3LI70 58 aa8.04□□□□□ -1.12
HMGN3-203ENST00000620514 MACF1Q9UPN3 7388 aaKnown RBP7.99□□□□□ -1.13
HMGN3-203ENST00000620514 H3BS24 57 aa7.97□□□□□ -1.13
HMGN3-203ENST00000620514 KRTAP3-1Q9BYR8 98 aa7.96□□□□□ -1.14
HMGN3-203ENST00000620514 SYNE2Q8WXH0 6885 aaKnown RBP7.96□□□□□ -1.14
HMGN3-203ENST00000620514 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
HMGN3-203ENST00000620514 GTF2H5Q6ZYL4 71 aa7.91□□□□□ -1.14
HMGN3-203ENST00000620514 ETDBQ3ZM63 59 aa7.89□□□□□ -1.15
HMGN3-203ENST00000620514 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
HMGN3-203ENST00000620514 S4R3F8 94 aa7.88□□□□□ -1.15
HMGN3-203ENST00000620514 F8W1H4 67 aa7.87□□□□□ -1.15
HMGN3-203ENST00000620514 KRTAP4-8Q9BYQ9 185 aa7.86□□□□□ -1.15
HMGN3-203ENST00000620514 TP53AIP1Q9HCN2 124 aa7.86□□□□□ -1.15
HMGN3-203ENST00000620514 PCP4L1A6NKN8 68 aa7.85□□□□□ -1.15
HMGN3-203ENST00000620514 LCA10Q71F78 164 aa7.84□□□□□ -1.15
HMGN3-203ENST00000620514 FAM236AA0A1B0GUQ0 79 aa7.83□□□□□ -1.16
HMGN3-203ENST00000620514 FAM236BA0A1B0GV22 79 aa7.83□□□□□ -1.16
HMGN3-203ENST00000620514 CSAG1Q6PB30 78 aa7.81□□□□□ -1.16
HMGN3-203ENST00000620514 CYP4F30PQ9H0H9 118 aa7.76□□□□□ -1.17
HMGN3-203ENST00000620514 MT1BP07438 61 aa7.74□□□□□ -1.17
HMGN3-203ENST00000620514 A0A087WVE0 104 aa7.71□□□□□ -1.18
HMGN3-203ENST00000620514 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.18
HMGN3-203ENST00000620514 TRAV22A0A0B4J277 110 aa7.7□□□□□ -1.18
HMGN3-203ENST00000620514 KRTAP19-8Q3LI54 63 aa7.69□□□□□ -1.18
HMGN3-203ENST00000620514 KRTAP6-3Q3LI67 103 aa7.69□□□□□ -1.18
HMGN3-203ENST00000620514 LOC101927531A0A1B0GV80 90 aa7.68□□□□□ -1.18
HMGN3-203ENST00000620514 ACYP1P07311 99 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms