RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.24
TNFAIP3-209ENST00000619035 FAM236DA0A1B0GTK5 79 aa7.34□□□□□ -1.24
TNFAIP3-209ENST00000619035 FAM236CP0DP71 79 aa7.34□□□□□ -1.24
TNFAIP3-209ENST00000619035 Q5VSD8 79 aa7.34□□□□□ -1.24
TNFAIP3-209ENST00000619035 OXTP01178 125 aa7.32□□□□□ -1.24
TNFAIP3-209ENST00000619035 HSPG2P98160 4391 aa7.32□□□□□ -1.24
TNFAIP3-209ENST00000619035 EPPK1P58107 5090 aaKnown RBP7.32□□□□□ -1.24
TNFAIP3-209ENST00000619035 NOTCH2NLQ7Z3S9 236 aa7.32□□□□□ -1.24
TNFAIP3-209ENST00000619035 SPAG11AQ6PDA7 123 aa7.31□□□□□ -1.24
TNFAIP3-209ENST00000619035 LIMD2Q9BT23 127 aa7.31□□□□□ -1.24
TNFAIP3-209ENST00000619035 hDV103S1A0JD37 113 aa7.31□□□□□ -1.24
TNFAIP3-209ENST00000619035 SPINK1P00995 79 aa7.31□□□□□ -1.24
TNFAIP3-209ENST00000619035 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
TNFAIP3-209ENST00000619035 RYR1P21817 5038 aa7.31□□□□□ -1.24
TNFAIP3-209ENST00000619035 A0A1B0GVX0 72 aa7.3□□□□□ -1.24
TNFAIP3-209ENST00000619035 LINC00304Q8N9R0 145 aa7.3□□□□□ -1.24
TNFAIP3-209ENST00000619035 C8orf17Q9NRJ1 99 aa7.29□□□□□ -1.24
TNFAIP3-209ENST00000619035 KIAA1109Q2LD37 5005 aa7.29□□□□□ -1.24
TNFAIP3-209ENST00000619035 NDUFC1O43677 76 aa7.29□□□□□ -1.24
TNFAIP3-209ENST00000619035 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
TNFAIP3-209ENST00000619035 C1orf195Q5TG92 126 aa7.27□□□□□ -1.24
TNFAIP3-209ENST00000619035 ZCCHC13Q8WW36 166 aaKnown RBP7.27□□□□□ -1.25
TNFAIP3-209ENST00000619035 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
TNFAIP3-209ENST00000619035 PKHD1L1Q86WI1 4243 aa7.26□□□□□ -1.25
TNFAIP3-209ENST00000619035 H0Y9P7 68 aa7.25□□□□□ -1.25
TNFAIP3-209ENST00000619035 Q8N1X5 172 aa7.25□□□□□ -1.25
TNFAIP3-209ENST00000619035 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
TNFAIP3-209ENST00000619035 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
TNFAIP3-209ENST00000619035 NDUFS5O43920 106 aa7.24□□□□□ -1.25
TNFAIP3-209ENST00000619035 MP68P56378 58 aa7.23□□□□□ -1.25
TNFAIP3-209ENST00000619035 PRR4Q16378 134 aa7.21□□□□□ -1.25
TNFAIP3-209ENST00000619035 MRPL34Q9BQ48 92 aaKnown RBP7.2□□□□□ -1.26
TNFAIP3-209ENST00000619035 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
TNFAIP3-209ENST00000619035 TRAV22A0A0B4J277 110 aa7.18□□□□□ -1.26
TNFAIP3-209ENST00000619035 C8orf87E5RJ46 101 aa7.18□□□□□ -1.26
TNFAIP3-209ENST00000619035 C1orf64Q8NEQ6 169 aa7.18□□□□□ -1.26
TNFAIP3-209ENST00000619035 LINC00313P59037 77 aa7.17□□□□□ -1.26
TNFAIP3-209ENST00000619035 KRTAP10-8P60410 259 aa7.17□□□□□ -1.26
TNFAIP3-209ENST00000619035 LRP1Q07954 4544 aaKnown RBP7.17□□□□□ -1.26
TNFAIP3-209ENST00000619035 ATP5EP56381 51 aaPredicted RBP7.16□□□□□ -1.26
TNFAIP3-209ENST00000619035 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
TNFAIP3-209ENST00000619035 TP53AIP1Q9HCN2 124 aa7.14□□□□□ -1.27
TNFAIP3-209ENST00000619035 FLG2Q5D862 2391 aaPredicted RBP7.13□□□□□ -1.27
TNFAIP3-209ENST00000619035 Q5W150 140 aa7.12□□□□□ -1.27
TNFAIP3-209ENST00000619035 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
TNFAIP3-209ENST00000619035 H3BPC8 53 aa7.11□□□□□ -1.27
TNFAIP3-209ENST00000619035 TNXBP22105 4242 aa7.1□□□□□ -1.27
TNFAIP3-209ENST00000619035 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
TNFAIP3-209ENST00000619035 MYCBP2O75592 4640 aa7.08□□□□□ -1.28
TNFAIP3-209ENST00000619035 FP248Q71RG6 208 aaPredicted RBP7.07□□□□□ -1.28
TNFAIP3-209ENST00000619035 FAT3Q8TDW7 4589 aa7.07□□□□□ -1.28
TNFAIP3-209ENST00000619035 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
TNFAIP3-209ENST00000619035 C9orf92A6NGG3 77 aa7.05□□□□□ -1.28
TNFAIP3-209ENST00000619035 KRTAP13-3Q3SY46 172 aa7.05□□□□□ -1.28
TNFAIP3-209ENST00000619035 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
TNFAIP3-209ENST00000619035 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
TNFAIP3-209ENST00000619035 Q8N9P0 234 aaPredicted RBP7.04□□□□□ -1.28
TNFAIP3-209ENST00000619035 SMIM26A0A096LP01 95 aa7.03□□□□□ -1.28
TNFAIP3-209ENST00000619035 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
TNFAIP3-209ENST00000619035 MPLKIPQ8TAP9 179 aa7.02□□□□□ -1.29
TNFAIP3-209ENST00000619035 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
TNFAIP3-209ENST00000619035 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
TNFAIP3-209ENST00000619035 IGLV7-46A0A075B6I9 117 aa6.99□□□□□ -1.29
TNFAIP3-209ENST00000619035 LOC101927531A0A1B0GV80 90 aa6.97□□□□□ -1.29
TNFAIP3-209ENST00000619035 BIRC6Q9NR09 4857 aa6.97□□□□□ -1.29
TNFAIP3-209ENST00000619035 ABCA13Q86UQ4 5058 aa6.94□□□□□ -1.3
TNFAIP3-209ENST00000619035 COA5Q86WW8 74 aa6.92□□□□□ -1.3
TNFAIP3-209ENST00000619035 C20orf166-AS1Q96NR2 134 aa6.91□□□□□ -1.3
TNFAIP3-209ENST00000619035 IGKV2D-30A0A075B6S6 120 aa6.9□□□□□ -1.3
TNFAIP3-209ENST00000619035 IGKV2-30P06310 120 aa6.9□□□□□ -1.3
TNFAIP3-209ENST00000619035 A8MUU9 505 aa6.89□□□□□ -1.31
TNFAIP3-209ENST00000619035 HRES1P13985 223 aa6.89□□□□□ -1.31
TNFAIP3-209ENST00000619035 HERC2O95714 4834 aa6.89□□□□□ -1.31
TNFAIP3-209ENST00000619035 Q75L30 129 aa6.85□□□□□ -1.31
TNFAIP3-209ENST00000619035 J3QL48 77 aa6.85□□□□□ -1.31
TNFAIP3-209ENST00000619035 PSPHP1O15172 72 aa6.84□□□□□ -1.31
TNFAIP3-209ENST00000619035 Q1T7F1 81 aa6.84□□□□□ -1.31
TNFAIP3-209ENST00000619035 SEC61GP60059 68 aa6.8□□□□□ -1.32
TNFAIP3-209ENST00000619035 XP32Q5T750 250 aa6.8□□□□□ -1.32
TNFAIP3-209ENST00000619035 C7orf65Q6ZTY9 151 aa6.8□□□□□ -1.32
TNFAIP3-209ENST00000619035 A8MUN3 132 aa6.79□□□□□ -1.32
TNFAIP3-209ENST00000619035 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
TNFAIP3-209ENST00000619035 ATP11AUNQ6ZP68 121 aa6.78□□□□□ -1.32
TNFAIP3-209ENST00000619035 DMAC1Q96GE9 116 aa6.78□□□□□ -1.32
TNFAIP3-209ENST00000619035 ACYP2P14621 99 aa6.76□□□□□ -1.33
TNFAIP3-209ENST00000619035 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
TNFAIP3-209ENST00000619035 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
TNFAIP3-209ENST00000619035 SPINK7P58062 85 aa6.73□□□□□ -1.33
TNFAIP3-209ENST00000619035 BRK1Q8WUW1 75 aa6.73□□□□□ -1.33
TNFAIP3-209ENST00000619035 Q5VV11 94 aa6.72□□□□□ -1.33
TNFAIP3-209ENST00000619035 V9GYY9 64 aa6.72□□□□□ -1.33
TNFAIP3-209ENST00000619035 PCLOQ9Y6V0 5065 aa6.72□□□□□ -1.33
TNFAIP3-209ENST00000619035 CHKB-CPT1BH3BT56 60 aa6.71□□□□□ -1.34
TNFAIP3-209ENST00000619035 LPAP08519 4548 aa6.69□□□□□ -1.34
TNFAIP3-209ENST00000619035 LINC01558Q9Y6Z2 57 aa6.66□□□□□ -1.34
TNFAIP3-209ENST00000619035 A8MU10 97 aa6.64□□□□□ -1.35
TNFAIP3-209ENST00000619035 LRP2P98164 4655 aa6.63□□□□□ -1.35
TNFAIP3-209ENST00000619035 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
TNFAIP3-209ENST00000619035 PRO0628Q9UI54 55 aa6.61□□□□□ -1.35
TNFAIP3-209ENST00000619035 A6NED7 52 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms