RNA–Protein interactions for RNA: ENST00000618462.4

PDE4DIP-246, Transcript of phosphodiesterase 4D interacting protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-246ENST00000618462 KRTAP26-1Q6PEX3 210 aa4.87□□□□□ -1.63
PDE4DIP-246ENST00000618462 SPRR1BP22528 89 aa4.87□□□□□ -1.63
PDE4DIP-246ENST00000618462 PLAC8Q9NZF1 115 aa4.86□□□□□ -1.63
PDE4DIP-246ENST00000618462 LOC400499M0QZD8 3231 aa4.85□□□□□ -1.63
PDE4DIP-246ENST00000618462 KRTAP1-1Q07627 177 aa4.85□□□□□ -1.63
PDE4DIP-246ENST00000618462 DCHS2Q6V1P9 2916 aa4.85□□□□□ -1.63
PDE4DIP-246ENST00000618462 FLNCQ14315 2725 aa4.84□□□□□ -1.64
PDE4DIP-246ENST00000618462 M0R2T5 61 aa4.83□□□□□ -1.64
PDE4DIP-246ENST00000618462 KRTAP29-1A8MX34 341 aaPredicted RBP4.83□□□□□ -1.64
PDE4DIP-246ENST00000618462 NIPBLQ6KC79 2804 aaeCLIP4.83□□□□□ -1.64
PDE4DIP-246ENST00000618462 FBN2P35556 2912 aa4.82□□□□□ -1.64
PDE4DIP-246ENST00000618462 SPTBN5Q9NRC6 3674 aaKnown RBP4.81□□□□□ -1.64
PDE4DIP-246ENST00000618462 NF1P21359 2839 aa4.81□□□□□ -1.64
PDE4DIP-246ENST00000618462 CELSR1Q9NYQ6 3014 aa4.81□□□□□ -1.64
PDE4DIP-246ENST00000618462 DCHS1Q96JQ0 3298 aa4.81□□□□□ -1.64
PDE4DIP-246ENST00000618462 ZANQ9Y493 2812 aa4.79□□□□□ -1.64
PDE4DIP-246ENST00000618462 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
PDE4DIP-246ENST00000618462 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
PDE4DIP-246ENST00000618462 KRTAP4-16G5E9R7 235 aaPredicted RBP4.78□□□□□ -1.64
PDE4DIP-246ENST00000618462 M0QZ58 72 aa4.78□□□□□ -1.64
PDE4DIP-246ENST00000618462 ADM2Q7Z4H4 148 aa4.77□□□□□ -1.65
PDE4DIP-246ENST00000618462 KRTAP1-5Q9BYS1 174 aa4.76□□□□□ -1.65
PDE4DIP-246ENST00000618462 PDZD2O15018 2839 aa4.76□□□□□ -1.65
PDE4DIP-246ENST00000618462 A8MU10 97 aa4.75□□□□□ -1.65
PDE4DIP-246ENST00000618462 LAMA5O15230 3695 aa4.75□□□□□ -1.65
PDE4DIP-246ENST00000618462 TENM1Q9UKZ4 2725 aa4.73□□□□□ -1.65
PDE4DIP-246ENST00000618462 PANO1I0J062 215 aa4.72□□□□□ -1.65
PDE4DIP-246ENST00000618462 CSMD1Q96PZ7 3565 aa4.69□□□□□ -1.66
PDE4DIP-246ENST00000618462 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
PDE4DIP-246ENST00000618462 A8MUU9 505 aa4.68□□□□□ -1.66
PDE4DIP-246ENST00000618462 KRTAP10-1P60331 282 aa4.65□□□□□ -1.66
PDE4DIP-246ENST00000618462 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.67
PDE4DIP-246ENST00000618462 KRTAP10-2P60368 255 aa4.64□□□□□ -1.67
PDE4DIP-246ENST00000618462 TGP01266 2768 aa4.64□□□□□ -1.67
PDE4DIP-246ENST00000618462 KRTAP11-1Q8IUC1 163 aa4.64□□□□□ -1.67
PDE4DIP-246ENST00000618462 ZFHX4Q86UP3 3567 aa4.63□□□□□ -1.67
PDE4DIP-246ENST00000618462 RELNP78509 3460 aa4.63□□□□□ -1.67
PDE4DIP-246ENST00000618462 TENM3Q9P273 2699 aa4.62□□□□□ -1.67
PDE4DIP-246ENST00000618462 HRNRQ86YZ3 2850 aaPredicted RBP4.6□□□□□ -1.67
PDE4DIP-246ENST00000618462 Q5VSD8 79 aa4.6□□□□□ -1.67
PDE4DIP-246ENST00000618462 MXRA5Q9NR99 2828 aa4.59□□□□□ -1.67
PDE4DIP-246ENST00000618462 CUBNO60494 3623 aa4.59□□□□□ -1.67
PDE4DIP-246ENST00000618462 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.68
PDE4DIP-246ENST00000618462 TNP1P09430 55 aa4.55□□□□□ -1.68
PDE4DIP-246ENST00000618462 PKD1L1Q8TDX9 2849 aa4.55□□□□□ -1.68
PDE4DIP-246ENST00000618462 KRTAP7-1Q8IUC3 87 aa4.55□□□□□ -1.68
PDE4DIP-246ENST00000618462 SMG1Q96Q15 3661 aaKnown RBP4.54□□□□□ -1.68
PDE4DIP-246ENST00000618462 VWFP04275 2813 aa4.54□□□□□ -1.68
PDE4DIP-246ENST00000618462 DMDP11532 3685 aa4.53□□□□□ -1.68
PDE4DIP-246ENST00000618462 TENM4Q6N022 2769 aa4.52□□□□□ -1.69
PDE4DIP-246ENST00000618462 ZFHX3Q15911 3703 aa4.51□□□□□ -1.69
PDE4DIP-246ENST00000618462 SPENQ96T58 3664 aaKnown RBP4.51□□□□□ -1.69
PDE4DIP-246ENST00000618462 NBPF19A0A087WUL8 3843 aa4.5□□□□□ -1.69
PDE4DIP-246ENST00000618462 P0C880 135 aa4.49□□□□□ -1.69
PDE4DIP-246ENST00000618462 RPS29P62273 56 aaKnown RBP4.49□□□□□ -1.69
PDE4DIP-246ENST00000618462 KRTAP13-1Q8IUC0 172 aa4.47□□□□□ -1.69
PDE4DIP-246ENST00000618462 KRTAP13-2Q52LG2 175 aa4.47□□□□□ -1.69
PDE4DIP-246ENST00000618462 Q6ZRN7 208 aaPredicted RBP4.44□□□□□ -1.7
PDE4DIP-246ENST00000618462 SVEP1Q4LDE5 3571 aa4.44□□□□□ -1.7
PDE4DIP-246ENST00000618462 H0YAA0 97 aa4.43□□□□□ -1.7
PDE4DIP-246ENST00000618462 COL7A1Q02388 2944 aa4.38□□□□□ -1.71
PDE4DIP-246ENST00000618462 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
PDE4DIP-246ENST00000618462 MUC3AQ02505 3323 aa4.32□□□□□ -1.72
PDE4DIP-246ENST00000618462 INE1O15225 51 aa4.3□□□□□ -1.72
PDE4DIP-246ENST00000618462 FBN1P35555 2871 aaKnown RBP4.3□□□□□ -1.72
PDE4DIP-246ENST00000618462 MEGF8Q7Z7M0 2845 aa4.29□□□□□ -1.72
PDE4DIP-246ENST00000618462 TENM2Q9NT68 2774 aa4.27□□□□□ -1.73
PDE4DIP-246ENST00000618462 KRTAP13-3Q3SY46 172 aa4.25□□□□□ -1.73
PDE4DIP-246ENST00000618462 FBN3Q75N90 2809 aa4.25□□□□□ -1.73
PDE4DIP-246ENST00000618462 CSMD2Q7Z408 3487 aa4.24□□□□□ -1.73
PDE4DIP-246ENST00000618462 OTOGQ6ZRI0 2925 aa4.23□□□□□ -1.73
PDE4DIP-246ENST00000618462 XP32Q5T750 250 aa4.21□□□□□ -1.74
PDE4DIP-246ENST00000618462 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
PDE4DIP-246ENST00000618462 VPS13CQ709C8 3753 aa4.19□□□□□ -1.74
PDE4DIP-246ENST00000618462 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
PDE4DIP-246ENST00000618462 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
PDE4DIP-246ENST00000618462 TRRAPQ9Y4A5 3859 aa4.15□□□□□ -1.75
PDE4DIP-246ENST00000618462 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
PDE4DIP-246ENST00000618462 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
PDE4DIP-246ENST00000618462 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
PDE4DIP-246ENST00000618462 ALMS1Q8TCU4 4167 aa4.08□□□□□ -1.76
PDE4DIP-246ENST00000618462 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
PDE4DIP-246ENST00000618462 TPRXLQ17RH7 258 aa4.07□□□□□ -1.76
PDE4DIP-246ENST00000618462 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
PDE4DIP-246ENST00000618462 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
PDE4DIP-246ENST00000618462 BSNQ9UPA5 3926 aa4.03□□□□□ -1.76
PDE4DIP-246ENST00000618462 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
PDE4DIP-246ENST00000618462 AKAP9Q99996 3911 aa3.96□□□□□ -1.78
PDE4DIP-246ENST00000618462 KRTAP3-1Q9BYR8 98 aa3.91□□□□□ -1.78
PDE4DIP-246ENST00000618462 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.79
PDE4DIP-246ENST00000618462 KRTAP21-3Q3LHN1 58 aa3.84□□□□□ -1.8
PDE4DIP-246ENST00000618462 ZNF469Q96JG9 3925 aaPredicted RBP3.8□□□□□ -1.8
PDE4DIP-246ENST00000618462 KRTAP3-2Q9BYR7 98 aa3.67□□□□□ -1.82
PDE4DIP-246ENST00000618462 CMYA5Q8N3K9 4069 aa3.67□□□□□ -1.82
PDE4DIP-246ENST00000618462 KRTAP3-3Q9BYR6 98 aa3.66□□□□□ -1.82
PDE4DIP-246ENST00000618462 ANK3Q12955 4377 aaKnown RBP3.65□□□□□ -1.82
PDE4DIP-246ENST00000618462 DNAH3Q8TD57 4116 aa3.61□□□□□ -1.83
PDE4DIP-246ENST00000618462 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
PDE4DIP-246ENST00000618462 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
PDE4DIP-246ENST00000618462 HUWE1Q7Z6Z7 4374 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms