RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 A8MWP4 228 aa9.8□□□□□ -0.84
TRAPPC3-210ENST00000617904 MT1HL1P0DM35 61 aa9.8□□□□□ -0.84
TRAPPC3-210ENST00000617904 A0A087WVE0 104 aa9.79□□□□□ -0.84
TRAPPC3-210ENST00000617904 PCP4P48539 62 aa9.79□□□□□ -0.84
TRAPPC3-210ENST00000617904 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
TRAPPC3-210ENST00000617904 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
TRAPPC3-210ENST00000617904 DSCR10P59022 87 aa9.78□□□□□ -0.84
TRAPPC3-210ENST00000617904 PRR26Q8N8Z3 221 aa9.78□□□□□ -0.84
TRAPPC3-210ENST00000617904 DEFB116Q30KQ4 102 aa9.77□□□□□ -0.85
TRAPPC3-210ENST00000617904 K7EQZ3 153 aa9.74□□□□□ -0.85
TRAPPC3-210ENST00000617904 PRR15Q8IV56 129 aa9.74□□□□□ -0.85
TRAPPC3-210ENST00000617904 Q8N9L7 120 aa9.74□□□□□ -0.85
TRAPPC3-210ENST00000617904 HCG22E2RYF7 251 aa9.72□□□□□ -0.85
TRAPPC3-210ENST00000617904 Q96NJ1 140 aa9.7□□□□□ -0.86
TRAPPC3-210ENST00000617904 TNXBP22105 4242 aa9.7□□□□□ -0.86
TRAPPC3-210ENST00000617904 A0A1B0GVX0 72 aa9.68□□□□□ -0.86
TRAPPC3-210ENST00000617904 C8orf87E5RJ46 101 aa9.66□□□□□ -0.86
TRAPPC3-210ENST00000617904 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
TRAPPC3-210ENST00000617904 SERP2Q8N6R1 65 aa9.65□□□□□ -0.86
TRAPPC3-210ENST00000617904 TRAV7A0A075B6U4 112 aa9.64□□□□□ -0.87
TRAPPC3-210ENST00000617904 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
TRAPPC3-210ENST00000617904 C1orf195Q5TG92 126 aa9.63□□□□□ -0.87
TRAPPC3-210ENST00000617904 UQCRQO14949 82 aa9.61□□□□□ -0.87
TRAPPC3-210ENST00000617904 WFDC13Q8IUB5 93 aa9.61□□□□□ -0.87
TRAPPC3-210ENST00000617904 C8orf17Q9NRJ1 99 aa9.61□□□□□ -0.87
TRAPPC3-210ENST00000617904 hDV103S1A0JD37 113 aa9.6□□□□□ -0.87
TRAPPC3-210ENST00000617904 COX7CP15954 63 aa9.6□□□□□ -0.87
TRAPPC3-210ENST00000617904 LRP2P98164 4655 aa9.58□□□□□ -0.88
TRAPPC3-210ENST00000617904 MMP24-AS1A0A0U1RRL7 71 aa9.56□□□□□ -0.88
TRAPPC3-210ENST00000617904 LINC00313P59037 77 aa9.56□□□□□ -0.88
TRAPPC3-210ENST00000617904 TMEM254Q8TBM7 123 aa9.56□□□□□ -0.88
TRAPPC3-210ENST00000617904 KRTAP10-8P60410 259 aa9.55□□□□□ -0.88
TRAPPC3-210ENST00000617904 TP53AIP1Q9HCN2 124 aa9.55□□□□□ -0.88
TRAPPC3-210ENST00000617904 MRPL34Q9BQ48 92 aaKnown RBP9.53□□□□□ -0.88
TRAPPC3-210ENST00000617904 NDUFS5O43920 106 aa9.51□□□□□ -0.89
TRAPPC3-210ENST00000617904 C5orf47Q569G3 176 aa9.5□□□□□ -0.89
TRAPPC3-210ENST00000617904 OCR1Q9BZK8 76 aa9.5□□□□□ -0.89
TRAPPC3-210ENST00000617904 RNF213Q63HN8 5207 aa9.49□□□□□ -0.89
TRAPPC3-210ENST00000617904 MP68P56378 58 aa9.48□□□□□ -0.89
TRAPPC3-210ENST00000617904 FP248Q71RG6 208 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC3-210ENST00000617904 CCDC179H3BU77 68 aa9.44□□□□□ -0.9
TRAPPC3-210ENST00000617904 H3BPC8 53 aa9.43□□□□□ -0.9
TRAPPC3-210ENST00000617904 C20orf197Q8N268 126 aa9.43□□□□□ -0.9
TRAPPC3-210ENST00000617904 NDUFC1O43677 76 aa9.41□□□□□ -0.9
TRAPPC3-210ENST00000617904 TRAV22A0A0B4J277 110 aa9.38□□□□□ -0.91
TRAPPC3-210ENST00000617904 H0Y9P7 68 aa9.37□□□□□ -0.91
TRAPPC3-210ENST00000617904 KLKP1Q107X0 134 aa9.37□□□□□ -0.91
TRAPPC3-210ENST00000617904 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
TRAPPC3-210ENST00000617904 Q8N9P0 234 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC3-210ENST00000617904 RETNLBQ9BQ08 111 aa9.34□□□□□ -0.91
TRAPPC3-210ENST00000617904 LPAP08519 4548 aa9.33□□□□□ -0.92
TRAPPC3-210ENST00000617904 A0A0U1RQV1 116 aa9.31□□□□□ -0.92
TRAPPC3-210ENST00000617904 LINC00208Q96KT6 92 aa9.31□□□□□ -0.92
TRAPPC3-210ENST00000617904 IGLV7-46A0A075B6I9 117 aa9.3□□□□□ -0.92
TRAPPC3-210ENST00000617904 SNURFQ9Y675 71 aa9.3□□□□□ -0.92
TRAPPC3-210ENST00000617904 KRTAP16-1A8MUX0 517 aa9.29□□□□□ -0.92
TRAPPC3-210ENST00000617904 C1orf64Q8NEQ6 169 aa9.28□□□□□ -0.92
TRAPPC3-210ENST00000617904 C9orf92A6NGG3 77 aa9.27□□□□□ -0.93
TRAPPC3-210ENST00000617904 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
TRAPPC3-210ENST00000617904 TMEM258P61165 79 aa9.26□□□□□ -0.93
TRAPPC3-210ENST00000617904 PRR4Q16378 134 aa9.24□□□□□ -0.93
TRAPPC3-210ENST00000617904 LCE2BO14633 110 aa9.22□□□□□ -0.93
TRAPPC3-210ENST00000617904 ATP5EP56381 51 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC3-210ENST00000617904 C20orf166-AS1Q96NR2 134 aa9.21□□□□□ -0.94
TRAPPC3-210ENST00000617904 A8MUU9 505 aa9.19□□□□□ -0.94
TRAPPC3-210ENST00000617904 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
TRAPPC3-210ENST00000617904 H7BZZ5 65 aa9.17□□□□□ -0.94
TRAPPC3-210ENST00000617904 Q75L30 129 aa9.17□□□□□ -0.94
TRAPPC3-210ENST00000617904 FAM236DA0A1B0GTK5 79 aa9.14□□□□□ -0.95
TRAPPC3-210ENST00000617904 FAM236CP0DP71 79 aa9.14□□□□□ -0.95
TRAPPC3-210ENST00000617904 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
TRAPPC3-210ENST00000617904 Q5W150 140 aa9.13□□□□□ -0.95
TRAPPC3-210ENST00000617904 TPRXLQ17RH7 258 aa9.12□□□□□ -0.95
TRAPPC3-210ENST00000617904 KRTAP13-3Q3SY46 172 aa9.12□□□□□ -0.95
TRAPPC3-210ENST00000617904 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
TRAPPC3-210ENST00000617904 CYSTM1Q9H1C7 97 aa9.1□□□□□ -0.95
TRAPPC3-210ENST00000617904 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
TRAPPC3-210ENST00000617904 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
TRAPPC3-210ENST00000617904 CYP4F30PQ9H0H9 118 aa9.08□□□□□ -0.96
TRAPPC3-210ENST00000617904 MUC2Q02817 5179 aa9.08□□□□□ -0.96
TRAPPC3-210ENST00000617904 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
TRAPPC3-210ENST00000617904 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-210ENST00000617904 PCOTHQ58A44 107 aa9.05□□□□□ -0.96
TRAPPC3-210ENST00000617904 XP32Q5T750 250 aa9.05□□□□□ -0.96
TRAPPC3-210ENST00000617904 SERP1Q9Y6X1 66 aa8.98□□□□□ -0.97
TRAPPC3-210ENST00000617904 RPS28P62857 69 aaKnown RBP8.95□□□□□ -0.98
TRAPPC3-210ENST00000617904 HRES1P13985 223 aa8.93□□□□□ -0.98
TRAPPC3-210ENST00000617904 SPINK7P58062 85 aa8.92□□□□□ -0.98
TRAPPC3-210ENST00000617904 LCE2AQ5TA79 106 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC3-210ENST00000617904 MUC17Q685J3 4493 aa8.91□□□□□ -0.98
TRAPPC3-210ENST00000617904 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
TRAPPC3-210ENST00000617904 KRTAP9-2Q9BYQ4 174 aa8.91□□□□□ -0.98
TRAPPC3-210ENST00000617904 FAT4Q6V0I7 4981 aa8.9□□□□□ -0.98
TRAPPC3-210ENST00000617904 ACYP2P14621 99 aa8.89□□□□□ -0.99
TRAPPC3-210ENST00000617904 A8MUN3 132 aa8.86□□□□□ -0.99
TRAPPC3-210ENST00000617904 DMAC1Q96GE9 116 aa8.82□□□□□ -1
TRAPPC3-210ENST00000617904 CHKB-CPT1BH3BT56 60 aa8.8□□□□□ -1
TRAPPC3-210ENST00000617904 C4orf26Q17RF5 130 aa8.77□□□□□ -1.01
TRAPPC3-210ENST00000617904 COA5Q86WW8 74 aa8.77□□□□□ -1.01
TRAPPC3-210ENST00000617904 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms