RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 Q6ZQT0 140 aa11.3□□□□□ -0.6
ARHGEF1-223ENST00000617585 MPLKIPQ8TAP9 179 aa11.3□□□□□ -0.6
ARHGEF1-223ENST00000617585 ATXN8Q156A1 80 aa11.28□□□□□ -0.6
ARHGEF1-223ENST00000617585 A0A1B0GW54 56 aa11.26□□□□□ -0.61
ARHGEF1-223ENST00000617585 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
ARHGEF1-223ENST00000617585 HRES1P13985 223 aa11.26□□□□□ -0.61
ARHGEF1-223ENST00000617585 KRTAP9-8Q9BYQ0 159 aa11.25□□□□□ -0.61
ARHGEF1-223ENST00000617585 SMIM6P0DI80 62 aa11.24□□□□□ -0.61
ARHGEF1-223ENST00000617585 LOC110117498A0A087WWA1 95 aa11.23□□□□□ -0.61
ARHGEF1-223ENST00000617585 NAA38Q9BRA0 125 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-223ENST00000617585 PDE6GP18545 87 aa11.2□□□□□ -0.62
ARHGEF1-223ENST00000617585 RBM12B-AS1Q9P1G2 102 aa11.19□□□□□ -0.62
ARHGEF1-223ENST00000617585 Q8N9P0 234 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF1-223ENST00000617585 NDUFB1O75438 58 aa11.16□□□□□ -0.62
ARHGEF1-223ENST00000617585 ZCCHC13Q8WW36 166 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-223ENST00000617585 FAM236DA0A1B0GTK5 79 aa11.15□□□□□ -0.62
ARHGEF1-223ENST00000617585 FAM236CP0DP71 79 aa11.15□□□□□ -0.62
ARHGEF1-223ENST00000617585 LYRM7Q5U5X0 104 aa11.14□□□□□ -0.63
ARHGEF1-223ENST00000617585 A8MWP4 228 aa11.13□□□□□ -0.63
ARHGEF1-223ENST00000617585 C14orf132Q9NPU4 83 aa11.1□□□□□ -0.63
ARHGEF1-223ENST00000617585 C8orf17Q9NRJ1 99 aa11.1□□□□□ -0.63
ARHGEF1-223ENST00000617585 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
ARHGEF1-223ENST00000617585 TSTD3H0UI37 97 aa11.08□□□□□ -0.64
ARHGEF1-223ENST00000617585 SPINK7P58062 85 aa11.06□□□□□ -0.64
ARHGEF1-223ENST00000617585 MT2AP02795 61 aa11.04□□□□□ -0.64
ARHGEF1-223ENST00000617585 PRR15Q8IV56 129 aa11.03□□□□□ -0.64
ARHGEF1-223ENST00000617585 MTURNQ8N3F0 131 aa11.03□□□□□ -0.64
ARHGEF1-223ENST00000617585 USH2AO75445 5202 aa11.02□□□□□ -0.64
ARHGEF1-223ENST00000617585 NREPQ16612 68 aa11.01□□□□□ -0.65
ARHGEF1-223ENST00000617585 C9orf118A6NHY6 69 aa11□□□□□ -0.65
ARHGEF1-223ENST00000617585 H3BT86 120 aa11□□□□□ -0.65
ARHGEF1-223ENST00000617585 BATFQ16520 125 aa11□□□□□ -0.65
ARHGEF1-223ENST00000617585 Q6ZVQ6 151 aa11□□□□□ -0.65
ARHGEF1-223ENST00000617585 TAX1BP3O14907 124 aa10.96□□□□□ -0.65
ARHGEF1-223ENST00000617585 MMP24-AS1A0A0U1RRL7 71 aa10.95□□□□□ -0.66
ARHGEF1-223ENST00000617585 MT1FP04733 61 aa10.95□□□□□ -0.66
ARHGEF1-223ENST00000617585 LOC105371267A0A1B0GV96 52 aa10.94□□□□□ -0.66
ARHGEF1-223ENST00000617585 A0A1W2PPM0 123 aa10.94□□□□□ -0.66
ARHGEF1-223ENST00000617585 TMEM254Q8TBM7 123 aa10.94□□□□□ -0.66
ARHGEF1-223ENST00000617585 SSPOA2VEC9 5147 aa10.94□□□□□ -0.66
ARHGEF1-223ENST00000617585 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
ARHGEF1-223ENST00000617585 KRTAP9-3Q9BYQ3 159 aa10.9□□□□□ -0.66
ARHGEF1-223ENST00000617585 K7EQZ3 153 aa10.87□□□□□ -0.67
ARHGEF1-223ENST00000617585 WFDC13Q8IUB5 93 aa10.87□□□□□ -0.67
ARHGEF1-223ENST00000617585 hDV103S1A0JD37 113 aa10.86□□□□□ -0.67
ARHGEF1-223ENST00000617585 KRTAP10-10P60014 251 aa10.86□□□□□ -0.67
ARHGEF1-223ENST00000617585 LCE2BO14633 110 aa10.84□□□□□ -0.67
ARHGEF1-223ENST00000617585 BPY2O14599 106 aa10.8□□□□□ -0.68
ARHGEF1-223ENST00000617585 SPCS1Q9Y6A9 102 aa10.76□□□□□ -0.69
ARHGEF1-223ENST00000617585 SMCPP49901 116 aaPredicted RBP10.74□□□□□ -0.69
ARHGEF1-223ENST00000617585 NDUFS5O43920 106 aa10.73□□□□□ -0.69
ARHGEF1-223ENST00000617585 Q5W150 140 aa10.7□□□□□ -0.7
ARHGEF1-223ENST00000617585 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF1-223ENST00000617585 H1FX-AS1Q4G0G2 97 aa10.69□□□□□ -0.7
ARHGEF1-223ENST00000617585 FCGBPQ9Y6R7 5405 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF1-223ENST00000617585 CASC2Q6XLA1 102 aa10.66□□□□□ -0.7
ARHGEF1-223ENST00000617585 C7orf65Q6ZTY9 151 aa10.66□□□□□ -0.7
ARHGEF1-223ENST00000617585 Q8N9L7 120 aa10.66□□□□□ -0.7
ARHGEF1-223ENST00000617585 PRO0461Q9UI25 63 aa10.66□□□□□ -0.7
ARHGEF1-223ENST00000617585 KRTAP19-1Q8IUB9 90 aa10.65□□□□□ -0.7
ARHGEF1-223ENST00000617585 COL5A1-AS1Q5SY13 56 aa10.64□□□□□ -0.71
ARHGEF1-223ENST00000617585 IGKV2D-30A0A075B6S6 120 aa10.62□□□□□ -0.71
ARHGEF1-223ENST00000617585 IGKV2-30P06310 120 aa10.62□□□□□ -0.71
ARHGEF1-223ENST00000617585 HCG22E2RYF7 251 aa10.61□□□□□ -0.71
ARHGEF1-223ENST00000617585 LINC00846Q9NV44 126 aa10.61□□□□□ -0.71
ARHGEF1-223ENST00000617585 K7EP34 96 aa10.58□□□□□ -0.72
ARHGEF1-223ENST00000617585 CXCL6P80162 114 aa10.58□□□□□ -0.72
ARHGEF1-223ENST00000617585 UBL5Q9BZL1 73 aa10.58□□□□□ -0.72
ARHGEF1-223ENST00000617585 KRTAP9-7A8MTY7 169 aa10.56□□□□□ -0.72
ARHGEF1-223ENST00000617585 KRTAP19-6Q3LI70 58 aa10.5□□□□□ -0.73
ARHGEF1-223ENST00000617585 C4orf26Q17RF5 130 aa10.47□□□□□ -0.73
ARHGEF1-223ENST00000617585 GTF2H5Q6ZYL4 71 aa10.43□□□□□ -0.74
ARHGEF1-223ENST00000617585 F8W1H4 67 aa10.42□□□□□ -0.74
ARHGEF1-223ENST00000617585 KRTAP3-1Q9BYR8 98 aa10.39□□□□□ -0.75
ARHGEF1-223ENST00000617585 TP53AIP1Q9HCN2 124 aa10.38□□□□□ -0.75
ARHGEF1-223ENST00000617585 MACF1Q9UPN3 7388 aaKnown RBP10.36□□□□□ -0.75
ARHGEF1-223ENST00000617585 ETDBQ3ZM63 59 aa10.34□□□□□ -0.75
ARHGEF1-223ENST00000617585 C1orf64Q8NEQ6 169 aa10.29□□□□□ -0.76
ARHGEF1-223ENST00000617585 C5orf47Q569G3 176 aa10.27□□□□□ -0.77
ARHGEF1-223ENST00000617585 S4R3F8 94 aa10.26□□□□□ -0.77
ARHGEF1-223ENST00000617585 SYNE2Q8WXH0 6885 aaKnown RBP10.22□□□□□ -0.77
ARHGEF1-223ENST00000617585 CSAG1Q6PB30 78 aa10.22□□□□□ -0.77
ARHGEF1-223ENST00000617585 PCP4L1A6NKN8 68 aa10.21□□□□□ -0.77
ARHGEF1-223ENST00000617585 LCA10Q71F78 164 aa10.21□□□□□ -0.77
ARHGEF1-223ENST00000617585 ACYP1P07311 99 aa10.17□□□□□ -0.78
ARHGEF1-223ENST00000617585 CYP4F30PQ9H0H9 118 aa10.17□□□□□ -0.78
ARHGEF1-223ENST00000617585 FAM236AA0A1B0GUQ0 79 aa10.13□□□□□ -0.79
ARHGEF1-223ENST00000617585 FAM236BA0A1B0GV22 79 aa10.13□□□□□ -0.79
ARHGEF1-223ENST00000617585 FAM240AA0A1B0GVK7 77 aa10.13□□□□□ -0.79
ARHGEF1-223ENST00000617585 SPRR2GQ9BYE4 73 aa10.12□□□□□ -0.79
ARHGEF1-223ENST00000617585 TRAV22A0A0B4J277 110 aa10.11□□□□□ -0.79
ARHGEF1-223ENST00000617585 KRTAP3-3Q9BYR6 98 aa10.11□□□□□ -0.79
ARHGEF1-223ENST00000617585 LOC101927531A0A1B0GV80 90 aa10.09□□□□□ -0.79
ARHGEF1-223ENST00000617585 ATP5EP2Q5VTU8 51 aa10.09□□□□□ -0.79
ARHGEF1-223ENST00000617585 KRTAP19-8Q3LI54 63 aa10.07□□□□□ -0.8
ARHGEF1-223ENST00000617585 MT1BP07438 61 aa10.06□□□□□ -0.8
ARHGEF1-223ENST00000617585 KLKP1Q107X0 134 aa10.02□□□□□ -0.81
ARHGEF1-223ENST00000617585 KRTAP6-3Q3LI67 103 aa10.01□□□□□ -0.81
ARHGEF1-223ENST00000617585 Q5VV11 94 aa10.01□□□□□ -0.81
ARHGEF1-223ENST00000617585 UQCRQO14949 82 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms