RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 HCG22E2RYF7 251 aa11.86□□□□□ -0.51
SDHA-220ENST00000617470 J3KT08 172 aa11.86□□□□□ -0.51
SDHA-220ENST00000617470 J3QL48 77 aa11.86□□□□□ -0.51
SDHA-220ENST00000617470 KRTAP10-8P60410 259 aa11.86□□□□□ -0.51
SDHA-220ENST00000617470 OCR1Q9BZK8 76 aa11.86□□□□□ -0.51
SDHA-220ENST00000617470 C20orf197Q8N268 126 aa11.85□□□□□ -0.51
SDHA-220ENST00000617470 MT1HL1P0DM35 61 aa11.84□□□□□ -0.51
SDHA-220ENST00000617470 TMEM258P61165 79 aa11.84□□□□□ -0.51
SDHA-220ENST00000617470 TNXBP22105 4242 aa11.8□□□□□ -0.52
SDHA-220ENST00000617470 WFDC13Q8IUB5 93 aa11.79□□□□□ -0.52
SDHA-220ENST00000617470 KLKP1Q107X0 134 aa11.78□□□□□ -0.52
SDHA-220ENST00000617470 LINC00304Q8N9R0 145 aa11.77□□□□□ -0.53
SDHA-220ENST00000617470 MMP24-AS1A0A0U1RRL7 71 aa11.76□□□□□ -0.53
SDHA-220ENST00000617470 ASB16-AS1Q495Z4 193 aa11.76□□□□□ -0.53
SDHA-220ENST00000617470 NDUFB1O75438 58 aa11.75□□□□□ -0.53
SDHA-220ENST00000617470 C4orf48Q5BLP8 95 aa11.75□□□□□ -0.53
SDHA-220ENST00000617470 CASC2Q6XLA1 102 aa11.74□□□□□ -0.53
SDHA-220ENST00000617470 Q5XG85 94 aa11.72□□□□□ -0.53
SDHA-220ENST00000617470 A0A1B0GVX0 72 aa11.72□□□□□ -0.53
SDHA-220ENST00000617470 SNURFQ9Y675 71 aa11.72□□□□□ -0.53
SDHA-220ENST00000617470 H7BZZ5 65 aa11.71□□□□□ -0.53
SDHA-220ENST00000617470 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
SDHA-220ENST00000617470 IGHV6-1A0A0B4J1U7 121 aa11.68□□□□□ -0.54
SDHA-220ENST00000617470 RPS28P62857 69 aaKnown RBP11.68□□□□□ -0.54
SDHA-220ENST00000617470 SPAG11AQ6PDA7 123 aa11.68□□□□□ -0.54
SDHA-220ENST00000617470 C8orf17Q9NRJ1 99 aa11.68□□□□□ -0.54
SDHA-220ENST00000617470 NOTCH2NLQ7Z3S9 236 aa11.67□□□□□ -0.54
SDHA-220ENST00000617470 TMEM254Q8TBM7 123 aa11.67□□□□□ -0.54
SDHA-220ENST00000617470 C1orf195Q5TG92 126 aa11.66□□□□□ -0.54
SDHA-220ENST00000617470 hDV103S1A0JD37 113 aa11.65□□□□□ -0.54
SDHA-220ENST00000617470 SPINK1P00995 79 aa11.65□□□□□ -0.55
SDHA-220ENST00000617470 A0A0U1RQV1 116 aa11.63□□□□□ -0.55
SDHA-220ENST00000617470 NDUFC1O43677 76 aa11.63□□□□□ -0.55
SDHA-220ENST00000617470 FAM236DA0A1B0GTK5 79 aa11.62□□□□□ -0.55
SDHA-220ENST00000617470 FAM236CP0DP71 79 aa11.62□□□□□ -0.55
SDHA-220ENST00000617470 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
SDHA-220ENST00000617470 C5orf47Q569G3 176 aa11.56□□□□□ -0.56
SDHA-220ENST00000617470 RPS29P62273 56 aaKnown RBP11.55□□□□□ -0.56
SDHA-220ENST00000617470 ZCCHC13Q8WW36 166 aaKnown RBP11.53□□□□□ -0.56
SDHA-220ENST00000617470 MRPL34Q9BQ48 92 aaKnown RBP11.53□□□□□ -0.56
SDHA-220ENST00000617470 RETNLBQ9BQ08 111 aa11.52□□□□□ -0.56
SDHA-220ENST00000617470 C8orf87E5RJ46 101 aa11.49□□□□□ -0.57
SDHA-220ENST00000617470 ATP5EP56381 51 aaPredicted RBP11.48□□□□□ -0.57
SDHA-220ENST00000617470 HERC1Q15751 4861 aa11.47□□□□□ -0.57
SDHA-220ENST00000617470 SERP1Q9Y6X1 66 aa11.47□□□□□ -0.57
SDHA-220ENST00000617470 H0Y9P7 68 aa11.47□□□□□ -0.57
SDHA-220ENST00000617470 LINC00313P59037 77 aa11.45□□□□□ -0.58
SDHA-220ENST00000617470 TP53AIP1Q9HCN2 124 aa11.45□□□□□ -0.58
SDHA-220ENST00000617470 MP68P56378 58 aa11.44□□□□□ -0.58
SDHA-220ENST00000617470 NDUFS5O43920 106 aa11.43□□□□□ -0.58
SDHA-220ENST00000617470 PRR4Q16378 134 aa11.43□□□□□ -0.58
SDHA-220ENST00000617470 LINC00208Q96KT6 92 aa11.43□□□□□ -0.58
SDHA-220ENST00000617470 TRAV22A0A0B4J277 110 aa11.42□□□□□ -0.58
SDHA-220ENST00000617470 KRTAP16-1A8MUX0 517 aa11.41□□□□□ -0.58
SDHA-220ENST00000617470 H3BPC8 53 aa11.37□□□□□ -0.59
SDHA-220ENST00000617470 Q8N9P0 234 aaPredicted RBP11.36□□□□□ -0.59
SDHA-220ENST00000617470 C1orf64Q8NEQ6 169 aa11.36□□□□□ -0.59
SDHA-220ENST00000617470 Q5W150 140 aa11.35□□□□□ -0.59
SDHA-220ENST00000617470 KRTAP13-3Q3SY46 172 aa11.34□□□□□ -0.59
SDHA-220ENST00000617470 IGLV7-46A0A075B6I9 117 aa11.33□□□□□ -0.6
SDHA-220ENST00000617470 FP248Q71RG6 208 aaPredicted RBP11.33□□□□□ -0.6
SDHA-220ENST00000617470 SMIM26A0A096LP01 95 aa11.25□□□□□ -0.61
SDHA-220ENST00000617470 HMCN2Q8NDA2 5059 aa11.21□□□□□ -0.61
SDHA-220ENST00000617470 C4orf26Q17RF5 130 aa11.21□□□□□ -0.62
SDHA-220ENST00000617470 C9orf92A6NGG3 77 aa11.19□□□□□ -0.62
SDHA-220ENST00000617470 CYP4F30PQ9H0H9 118 aa11.18□□□□□ -0.62
SDHA-220ENST00000617470 PCOTHQ58A44 107 aa11.17□□□□□ -0.62
SDHA-220ENST00000617470 TPRXLQ17RH7 258 aa11.16□□□□□ -0.62
SDHA-220ENST00000617470 LOC101927531A0A1B0GV80 90 aa11.15□□□□□ -0.62
SDHA-220ENST00000617470 SPANXA2-OT1Q8N9U9 137 aa11.15□□□□□ -0.62
SDHA-220ENST00000617470 LPAP08519 4548 aa11.15□□□□□ -0.62
SDHA-220ENST00000617470 SVIPQ8NHG7 77 aa11.1□□□□□ -0.63
SDHA-220ENST00000617470 C20orf166-AS1Q96NR2 134 aa11.08□□□□□ -0.64
SDHA-220ENST00000617470 A8MUU9 505 aa11.07□□□□□ -0.64
SDHA-220ENST00000617470 IGKV2-30P06310 120 aa11.07□□□□□ -0.64
SDHA-220ENST00000617470 LRP2P98164 4655 aa11.04□□□□□ -0.64
SDHA-220ENST00000617470 XP32Q5T750 250 aa11.03□□□□□ -0.64
SDHA-220ENST00000617470 MPLKIPQ8TAP9 179 aa11□□□□□ -0.65
SDHA-220ENST00000617470 IGKV2D-30A0A075B6S6 120 aa10.97□□□□□ -0.65
SDHA-220ENST00000617470 HRES1P13985 223 aa10.96□□□□□ -0.65
SDHA-220ENST00000617470 Q75L30 129 aa10.93□□□□□ -0.66
SDHA-220ENST00000617470 Q1T7F1 81 aa10.91□□□□□ -0.66
SDHA-220ENST00000617470 RPL37P61927 97 aaKnown RBP10.87□□□□□ -0.67
SDHA-220ENST00000617470 C7orf65Q6ZTY9 151 aa10.86□□□□□ -0.67
SDHA-220ENST00000617470 COA5Q86WW8 74 aa10.86□□□□□ -0.67
SDHA-220ENST00000617470 SEC61BP60468 96 aaKnown RBP10.83□□□□□ -0.68
SDHA-220ENST00000617470 DMAC1Q96GE9 116 aa10.82□□□□□ -0.68
SDHA-220ENST00000617470 UBR4Q5T4S7 5183 aa10.81□□□□□ -0.68
SDHA-220ENST00000617470 ATP11AUNQ6ZP68 121 aa10.79□□□□□ -0.68
SDHA-220ENST00000617470 V9GYY9 64 aa10.77□□□□□ -0.68
SDHA-220ENST00000617470 SPINK7P58062 85 aa10.75□□□□□ -0.69
SDHA-220ENST00000617470 ACYP2P14621 99 aa10.74□□□□□ -0.69
SDHA-220ENST00000617470 MUC17Q685J3 4493 aa10.72□□□□□ -0.69
SDHA-220ENST00000617470 PSPHP1O15172 72 aa10.72□□□□□ -0.69
SDHA-220ENST00000617470 PRO0628Q9UI54 55 aa10.7□□□□□ -0.7
SDHA-220ENST00000617470 BRK1Q8WUW1 75 aa10.68□□□□□ -0.7
SDHA-220ENST00000617470 A8MUN3 132 aa10.67□□□□□ -0.7
SDHA-220ENST00000617470 Q5VV11 94 aa10.62□□□□□ -0.71
SDHA-220ENST00000617470 KRTAP3-1Q9BYR8 98 aa10.62□□□□□ -0.71
SDHA-220ENST00000617470 RNF213Q63HN8 5207 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms