RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 K7ERJ3 54 aa10.23□□□□□ -0.77
TRAPPC3-208ENST00000616074 A0A1B0GVX0 72 aa10.19□□□□□ -0.78
TRAPPC3-208ENST00000616074 C8orf87E5RJ46 101 aa10.19□□□□□ -0.78
TRAPPC3-208ENST00000616074 COX6CP09669 75 aa10.18□□□□□ -0.78
TRAPPC3-208ENST00000616074 HSD52Q0P140 79 aa10.18□□□□□ -0.78
TRAPPC3-208ENST00000616074 UBE2V1Q13404 147 aa10.18□□□□□ -0.78
TRAPPC3-208ENST00000616074 VPS25Q9BRG1 176 aa10.17□□□□□ -0.78
TRAPPC3-208ENST00000616074 MTURNQ8N3F0 131 aa10.15□□□□□ -0.78
TRAPPC3-208ENST00000616074 ZCCHC13Q8WW36 166 aaKnown RBP10.14□□□□□ -0.79
TRAPPC3-208ENST00000616074 SPINK7P58062 85 aa10.11□□□□□ -0.79
TRAPPC3-208ENST00000616074 RBM3P98179 157 aaKnown RBP10.11□□□□□ -0.79
TRAPPC3-208ENST00000616074 MACF1Q9UPN3 7388 aaKnown RBP10.1□□□□□ -0.79
TRAPPC3-208ENST00000616074 DSCR8Q96T75 97 aa10.08□□□□□ -0.8
TRAPPC3-208ENST00000616074 SYNE2Q8WXH0 6885 aaKnown RBP10.07□□□□□ -0.8
TRAPPC3-208ENST00000616074 PYY3Q5JQD4 70 aa10.07□□□□□ -0.8
TRAPPC3-208ENST00000616074 J3KT08 172 aa10.06□□□□□ -0.8
TRAPPC3-208ENST00000616074 Q8N9P0 234 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC3-208ENST00000616074 SCGB1C2P0DMR2 95 aa10.02□□□□□ -0.81
TRAPPC3-208ENST00000616074 Q6ZQT0 140 aa10.02□□□□□ -0.81
TRAPPC3-208ENST00000616074 C9JAW5 83 aa10.01□□□□□ -0.81
TRAPPC3-208ENST00000616074 C21orf62-AS1Q17RA5 79 aa10□□□□□ -0.81
TRAPPC3-208ENST00000616074 WFDC13Q8IUB5 93 aa9.99□□□□□ -0.81
TRAPPC3-208ENST00000616074 NDUFB1O75438 58 aa9.98□□□□□ -0.81
TRAPPC3-208ENST00000616074 BAALC-AS2P0C853 105 aa9.98□□□□□ -0.81
TRAPPC3-208ENST00000616074 KRTAP19-6Q3LI70 58 aa9.98□□□□□ -0.81
TRAPPC3-208ENST00000616074 UQCR10Q9UDW1 63 aa9.98□□□□□ -0.81
TRAPPC3-208ENST00000616074 A8MWP4 228 aa9.97□□□□□ -0.81
TRAPPC3-208ENST00000616074 C8orf17Q9NRJ1 99 aa9.96□□□□□ -0.82
TRAPPC3-208ENST00000616074 LINC00846Q9NV44 126 aa9.95□□□□□ -0.82
TRAPPC3-208ENST00000616074 LYRM7Q5U5X0 104 aa9.94□□□□□ -0.82
TRAPPC3-208ENST00000616074 IGKV3D-7A0A0C4DH55 119 aa9.91□□□□□ -0.82
TRAPPC3-208ENST00000616074 Q6ZVQ6 151 aa9.88□□□□□ -0.83
TRAPPC3-208ENST00000616074 LOC110117498A0A087WWA1 95 aa9.86□□□□□ -0.83
TRAPPC3-208ENST00000616074 JMJD7-PLA2G4BH0Y9G9 81 aa9.86□□□□□ -0.83
TRAPPC3-208ENST00000616074 A0A1B0GW54 56 aa9.85□□□□□ -0.83
TRAPPC3-208ENST00000616074 ATXN8Q156A1 80 aa9.82□□□□□ -0.84
TRAPPC3-208ENST00000616074 PRR15Q8IV56 129 aa9.82□□□□□ -0.84
TRAPPC3-208ENST00000616074 NAA38Q9BRA0 125 aaKnown RBP9.81□□□□□ -0.84
TRAPPC3-208ENST00000616074 PDE6GP18545 87 aa9.79□□□□□ -0.84
TRAPPC3-208ENST00000616074 C14orf132Q9NPU4 83 aa9.79□□□□□ -0.84
TRAPPC3-208ENST00000616074 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
TRAPPC3-208ENST00000616074 H1FX-AS1Q4G0G2 97 aa9.78□□□□□ -0.84
TRAPPC3-208ENST00000616074 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
TRAPPC3-208ENST00000616074 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.85
TRAPPC3-208ENST00000616074 NREPQ16612 68 aa9.75□□□□□ -0.85
TRAPPC3-208ENST00000616074 TMA7Q9Y2S6 64 aaKnown RBP9.73□□□□□ -0.85
TRAPPC3-208ENST00000616074 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
TRAPPC3-208ENST00000616074 NDUFS5O43920 106 aa9.7□□□□□ -0.86
TRAPPC3-208ENST00000616074 K7EQZ3 153 aa9.69□□□□□ -0.86
TRAPPC3-208ENST00000616074 M0R143 59 aa9.69□□□□□ -0.86
TRAPPC3-208ENST00000616074 KRTAP6-3Q3LI67 103 aa9.68□□□□□ -0.86
TRAPPC3-208ENST00000616074 IGKV2D-30A0A075B6S6 120 aa9.65□□□□□ -0.86
TRAPPC3-208ENST00000616074 LOC105371267A0A1B0GV96 52 aa9.65□□□□□ -0.86
TRAPPC3-208ENST00000616074 IGKV2-30P06310 120 aa9.65□□□□□ -0.86
TRAPPC3-208ENST00000616074 Q5W150 140 aa9.62□□□□□ -0.87
TRAPPC3-208ENST00000616074 C7orf65Q6ZTY9 151 aa9.62□□□□□ -0.87
TRAPPC3-208ENST00000616074 BPY2O14599 106 aa9.55□□□□□ -0.88
TRAPPC3-208ENST00000616074 C4orf26Q17RF5 130 aa9.52□□□□□ -0.89
TRAPPC3-208ENST00000616074 H3BT86 120 aa9.5□□□□□ -0.89
TRAPPC3-208ENST00000616074 Q8N9L7 120 aa9.5□□□□□ -0.89
TRAPPC3-208ENST00000616074 HCG22E2RYF7 251 aa9.49□□□□□ -0.89
TRAPPC3-208ENST00000616074 CASC2Q6XLA1 102 aa9.48□□□□□ -0.89
TRAPPC3-208ENST00000616074 NEBP20929 6669 aa9.47□□□□□ -0.89
TRAPPC3-208ENST00000616074 BATFQ16520 125 aa9.46□□□□□ -0.9
TRAPPC3-208ENST00000616074 C5orf47Q569G3 176 aa9.46□□□□□ -0.9
TRAPPC3-208ENST00000616074 FAM236AA0A1B0GUQ0 79 aa9.43□□□□□ -0.9
TRAPPC3-208ENST00000616074 FAM236BA0A1B0GV22 79 aa9.43□□□□□ -0.9
TRAPPC3-208ENST00000616074 MUC12Q9UKN1 5478 aa9.42□□□□□ -0.9
TRAPPC3-208ENST00000616074 MT1BP07438 61 aa9.41□□□□□ -0.9
TRAPPC3-208ENST00000616074 CXCL6P80162 114 aa9.41□□□□□ -0.9
TRAPPC3-208ENST00000616074 C9orf118A6NHY6 69 aa9.4□□□□□ -0.9
TRAPPC3-208ENST00000616074 A6NN06 94 aa9.4□□□□□ -0.9
TRAPPC3-208ENST00000616074 TSTD3H0UI37 97 aa9.4□□□□□ -0.9
TRAPPC3-208ENST00000616074 SMIM6P0DI80 62 aa9.39□□□□□ -0.91
TRAPPC3-208ENST00000616074 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
TRAPPC3-208ENST00000616074 A0A1W2PPM0 123 aa9.37□□□□□ -0.91
TRAPPC3-208ENST00000616074 Q5VV11 94 aa9.36□□□□□ -0.91
TRAPPC3-208ENST00000616074 S4R3F8 94 aa9.36□□□□□ -0.91
TRAPPC3-208ENST00000616074 TAX1BP3O14907 124 aa9.35□□□□□ -0.91
TRAPPC3-208ENST00000616074 KRTAP19-8Q3LI54 63 aa9.33□□□□□ -0.92
TRAPPC3-208ENST00000616074 SPRR2GQ9BYE4 73 aa9.33□□□□□ -0.92
TRAPPC3-208ENST00000616074 CSAG1Q6PB30 78 aa9.31□□□□□ -0.92
TRAPPC3-208ENST00000616074 LCA10Q71F78 164 aa9.31□□□□□ -0.92
TRAPPC3-208ENST00000616074 C1orf64Q8NEQ6 169 aa9.29□□□□□ -0.92
TRAPPC3-208ENST00000616074 SVIPQ8NHG7 77 aa9.26□□□□□ -0.93
TRAPPC3-208ENST00000616074 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC3-208ENST00000616074 KRTAP10-5P60370 271 aa9.25□□□□□ -0.93
TRAPPC3-208ENST00000616074 UBL5Q9BZL1 73 aa9.22□□□□□ -0.93
TRAPPC3-208ENST00000616074 SPCS1Q9Y6A9 102 aa9.22□□□□□ -0.93
TRAPPC3-208ENST00000616074 PCP4L1A6NKN8 68 aa9.21□□□□□ -0.94
TRAPPC3-208ENST00000616074 KLKP1Q107X0 134 aa9.2□□□□□ -0.94
TRAPPC3-208ENST00000616074 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
TRAPPC3-208ENST00000616074 KRTAP5-9P26371 169 aa9.12□□□□□ -0.95
TRAPPC3-208ENST00000616074 KRTAP20-1Q3LI63 56 aa9.12□□□□□ -0.95
TRAPPC3-208ENST00000616074 MDN1Q9NU22 5596 aa9.11□□□□□ -0.95
TRAPPC3-208ENST00000616074 KMT2DO14686 5537 aa9.11□□□□□ -0.95
TRAPPC3-208ENST00000616074 PRO0461Q9UI25 63 aa9.11□□□□□ -0.95
TRAPPC3-208ENST00000616074 A0A087WVE0 104 aa9.05□□□□□ -0.96
TRAPPC3-208ENST00000616074 IMUPQ9GZP8 106 aa9.03□□□□□ -0.96
TRAPPC3-208ENST00000616074 CYP4F30PQ9H0H9 118 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms