RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 A8MUU9 505 aa8.78□□□□□ -1
CBWD3-211ENST00000615061 IGHV6-1A0A0B4J1U7 121 aa8.77□□□□□ -1.01
CBWD3-211ENST00000615061 KRTAP16-1A8MUX0 517 aa8.76□□□□□ -1.01
CBWD3-211ENST00000615061 H3BT86 120 aa8.75□□□□□ -1.01
CBWD3-211ENST00000615061 PDE6GP18545 87 aa8.74□□□□□ -1.01
CBWD3-211ENST00000615061 SPCS1Q9Y6A9 102 aa8.74□□□□□ -1.01
CBWD3-211ENST00000615061 C21orf62-AS1Q17RA5 79 aa8.73□□□□□ -1.01
CBWD3-211ENST00000615061 COL5A1-AS1Q5SY13 56 aa8.73□□□□□ -1.01
CBWD3-211ENST00000615061 A0A1B0GVX0 72 aa8.72□□□□□ -1.01
CBWD3-211ENST00000615061 A0A1B0GW54 56 aa8.7□□□□□ -1.02
CBWD3-211ENST00000615061 PCP4L1A6NKN8 68 aa8.7□□□□□ -1.02
CBWD3-211ENST00000615061 FLGP20930 4061 aaPredicted RBP8.69□□□□□ -1.02
CBWD3-211ENST00000615061 J3KT08 172 aa8.69□□□□□ -1.02
CBWD3-211ENST00000615061 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
CBWD3-211ENST00000615061 MT1HP80294 61 aa8.68□□□□□ -1.02
CBWD3-211ENST00000615061 C8orf87E5RJ46 101 aa8.66□□□□□ -1.02
CBWD3-211ENST00000615061 NREPQ16612 68 aa8.64□□□□□ -1.03
CBWD3-211ENST00000615061 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
CBWD3-211ENST00000615061 IGKV3D-7A0A0C4DH55 119 aa8.63□□□□□ -1.03
CBWD3-211ENST00000615061 A8MWP4 228 aa8.63□□□□□ -1.03
CBWD3-211ENST00000615061 NDUFB1O75438 58 aa8.63□□□□□ -1.03
CBWD3-211ENST00000615061 K7EP34 96 aa8.62□□□□□ -1.03
CBWD3-211ENST00000615061 PRO0461Q9UI25 63 aa8.62□□□□□ -1.03
CBWD3-211ENST00000615061 C8orf17Q9NRJ1 99 aa8.59□□□□□ -1.03
CBWD3-211ENST00000615061 PRR15Q8IV56 129 aa8.56□□□□□ -1.04
CBWD3-211ENST00000615061 KRTAP9-2Q9BYQ4 174 aa8.56□□□□□ -1.04
CBWD3-211ENST00000615061 K7EQZ3 153 aa8.53□□□□□ -1.04
CBWD3-211ENST00000615061 Q8N9P0 234 aaPredicted RBP8.53□□□□□ -1.04
CBWD3-211ENST00000615061 M0R2T5 61 aa8.52□□□□□ -1.05
CBWD3-211ENST00000615061 Q6ZVQ6 151 aa8.52□□□□□ -1.05
CBWD3-211ENST00000615061 ZCCHC13Q8WW36 166 aaKnown RBP8.51□□□□□ -1.05
CBWD3-211ENST00000615061 MMP24-AS1A0A0U1RRL7 71 aa8.5□□□□□ -1.05
CBWD3-211ENST00000615061 GTF2H5Q6ZYL4 71 aa8.5□□□□□ -1.05
CBWD3-211ENST00000615061 BPY2O14599 106 aa8.49□□□□□ -1.05
CBWD3-211ENST00000615061 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
CBWD3-211ENST00000615061 HRES1P13985 223 aa8.48□□□□□ -1.05
CBWD3-211ENST00000615061 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
CBWD3-211ENST00000615061 Q8N9L7 120 aa8.47□□□□□ -1.05
CBWD3-211ENST00000615061 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
CBWD3-211ENST00000615061 MRPL34Q9BQ48 92 aaKnown RBP8.45□□□□□ -1.06
CBWD3-211ENST00000615061 F8W1H4 67 aa8.44□□□□□ -1.06
CBWD3-211ENST00000615061 MPLKIPQ8TAP9 179 aa8.44□□□□□ -1.06
CBWD3-211ENST00000615061 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
CBWD3-211ENST00000615061 hDV103S1A0JD37 113 aa8.43□□□□□ -1.06
CBWD3-211ENST00000615061 ETDBQ3ZM63 59 aa8.43□□□□□ -1.06
CBWD3-211ENST00000615061 SPINK7P58062 85 aa8.42□□□□□ -1.06
CBWD3-211ENST00000615061 FAM236DA0A1B0GTK5 79 aa8.4□□□□□ -1.06
CBWD3-211ENST00000615061 FAM236CP0DP71 79 aa8.4□□□□□ -1.06
CBWD3-211ENST00000615061 UBL5Q9BZL1 73 aa8.4□□□□□ -1.07
CBWD3-211ENST00000615061 WFDC13Q8IUB5 93 aa8.39□□□□□ -1.07
CBWD3-211ENST00000615061 NDUFS5O43920 106 aa8.38□□□□□ -1.07
CBWD3-211ENST00000615061 RBM12B-AS1Q9P1G2 102 aa8.38□□□□□ -1.07
CBWD3-211ENST00000615061 FSIP2Q5CZC0 6907 aa8.36□□□□□ -1.07
CBWD3-211ENST00000615061 CASC2Q6XLA1 102 aa8.34□□□□□ -1.07
CBWD3-211ENST00000615061 LOC100996750A0A140TA64 210 aa8.31□□□□□ -1.08
CBWD3-211ENST00000615061 Q5W150 140 aa8.31□□□□□ -1.08
CBWD3-211ENST00000615061 KRTAP4-6Q9BYQ5 205 aa8.31□□□□□ -1.08
CBWD3-211ENST00000615061 HCG22E2RYF7 251 aa8.29□□□□□ -1.08
CBWD3-211ENST00000615061 KRTAP9-8Q9BYQ0 159 aa8.24□□□□□ -1.09
CBWD3-211ENST00000615061 IGKV2D-30A0A075B6S6 120 aa8.23□□□□□ -1.09
CBWD3-211ENST00000615061 IGKV2-30P06310 120 aa8.23□□□□□ -1.09
CBWD3-211ENST00000615061 CXCL6P80162 114 aa8.22□□□□□ -1.09
CBWD3-211ENST00000615061 A0A1B0GV90 55 aa8.22□□□□□ -1.09
CBWD3-211ENST00000615061 KRTAP9-6A0A140TA67 174 aa8.2□□□□□ -1.1
CBWD3-211ENST00000615061 C7orf65Q6ZTY9 151 aa8.18□□□□□ -1.1
CBWD3-211ENST00000615061 ACYP1P07311 99 aa8.16□□□□□ -1.1
CBWD3-211ENST00000615061 FAM240AA0A1B0GVK7 77 aa8.15□□□□□ -1.11
CBWD3-211ENST00000615061 MT2AP02795 61 aa8.15□□□□□ -1.11
CBWD3-211ENST00000615061 CRCT1Q9UGL9 99 aa8.1□□□□□ -1.11
CBWD3-211ENST00000615061 MT1FP04733 61 aa8.1□□□□□ -1.11
CBWD3-211ENST00000615061 C4orf26Q17RF5 130 aa8.09□□□□□ -1.11
CBWD3-211ENST00000615061 H1FX-AS1Q4G0G2 97 aa8.08□□□□□ -1.12
CBWD3-211ENST00000615061 USH2AO75445 5202 aa8.08□□□□□ -1.12
CBWD3-211ENST00000615061 TP53AIP1Q9HCN2 124 aa8.07□□□□□ -1.12
CBWD3-211ENST00000615061 ATP5EP2Q5VTU8 51 aa8.05□□□□□ -1.12
CBWD3-211ENST00000615061 HIST1H4AP62805 103 aaKnown RBP8.05□□□□□ -1.12
CBWD3-211ENST00000615061 KRTAP10-10P60014 251 aa8.03□□□□□ -1.12
CBWD3-211ENST00000615061 SSPOA2VEC9 5147 aa8□□□□□ -1.13
CBWD3-211ENST00000615061 A0A087WVE0 104 aa7.99□□□□□ -1.13
CBWD3-211ENST00000615061 LINC00643Q86TS7 51 aa7.99□□□□□ -1.13
CBWD3-211ENST00000615061 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
CBWD3-211ENST00000615061 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
CBWD3-211ENST00000615061 TRAV22A0A0B4J277 110 aa7.94□□□□□ -1.14
CBWD3-211ENST00000615061 C1orf64Q8NEQ6 169 aa7.93□□□□□ -1.14
CBWD3-211ENST00000615061 LCE2BO14633 110 aa7.92□□□□□ -1.14
CBWD3-211ENST00000615061 CYP4F30PQ9H0H9 118 aa7.92□□□□□ -1.14
CBWD3-211ENST00000615061 J3QR89 54 aa7.88□□□□□ -1.15
CBWD3-211ENST00000615061 LOC101927531A0A1B0GV80 90 aa7.87□□□□□ -1.15
CBWD3-211ENST00000615061 UQCRQO14949 82 aa7.87□□□□□ -1.15
CBWD3-211ENST00000615061 H0Y9P7 68 aa7.86□□□□□ -1.15
CBWD3-211ENST00000615061 C5orf47Q569G3 176 aa7.86□□□□□ -1.15
CBWD3-211ENST00000615061 S4R3F8 94 aa7.84□□□□□ -1.15
CBWD3-211ENST00000615061 LCA10Q71F78 164 aa7.82□□□□□ -1.16
CBWD3-211ENST00000615061 ATOX1O00244 68 aa7.8□□□□□ -1.16
CBWD3-211ENST00000615061 OCR1Q9BZK8 76 aa7.8□□□□□ -1.16
CBWD3-211ENST00000615061 LINC00208Q96KT6 92 aa7.76□□□□□ -1.17
CBWD3-211ENST00000615061 CSAG1Q6PB30 78 aa7.74□□□□□ -1.17
CBWD3-211ENST00000615061 FCGBPQ9Y6R7 5405 aaPredicted RBP7.74□□□□□ -1.17
CBWD3-211ENST00000615061 KLKP1Q107X0 134 aa7.71□□□□□ -1.17
CBWD3-211ENST00000615061 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms