RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 Q6ZR54 194 aa4.22□□□□□ -1.73
ALMS1-207ENST00000614410 A8MU10 97 aa4.22□□□□□ -1.73
ALMS1-207ENST00000614410 UBR5O95071 2799 aaPredicted RBP4.22□□□□□ -1.73
ALMS1-207ENST00000614410 SPRR1AP35321 89 aa4.21□□□□□ -1.74
ALMS1-207ENST00000614410 ITPR1Q14643 2758 aa4.21□□□□□ -1.74
ALMS1-207ENST00000614410 SPENQ96T58 3664 aaKnown RBP4.21□□□□□ -1.74
ALMS1-207ENST00000614410 TEP1Q99973 2627 aaKnown RBP4.2□□□□□ -1.74
ALMS1-207ENST00000614410 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
ALMS1-207ENST00000614410 KRTAP10-2P60368 255 aa4.19□□□□□ -1.74
ALMS1-207ENST00000614410 ITPR2Q14571 2701 aa4.18□□□□□ -1.74
ALMS1-207ENST00000614410 KRTAP1-1Q07627 177 aa4.18□□□□□ -1.74
ALMS1-207ENST00000614410 A8MUU9 505 aa4.18□□□□□ -1.74
ALMS1-207ENST00000614410 DMDP11532 3685 aa4.17□□□□□ -1.74
ALMS1-207ENST00000614410 A0A087X002 238 aa4.17□□□□□ -1.74
ALMS1-207ENST00000614410 SETXQ7Z333 2677 aaKnown RBP4.16□□□□□ -1.74
ALMS1-207ENST00000614410 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
ALMS1-207ENST00000614410 NOTCH2NLQ7Z3S9 236 aa4.16□□□□□ -1.74
ALMS1-207ENST00000614410 KRTAP1-5Q9BYS1 174 aa4.16□□□□□ -1.74
ALMS1-207ENST00000614410 SMG1Q96Q15 3661 aaKnown RBP4.16□□□□□ -1.74
ALMS1-207ENST00000614410 KMT2BQ9UMN6 2715 aaPredicted RBP4.15□□□□□ -1.74
ALMS1-207ENST00000614410 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.74
ALMS1-207ENST00000614410 PANO1I0J062 215 aa4.14□□□□□ -1.75
ALMS1-207ENST00000614410 SPRR1BP22528 89 aa4.12□□□□□ -1.75
ALMS1-207ENST00000614410 IGSF10Q6WRI0 2623 aa4.12□□□□□ -1.75
ALMS1-207ENST00000614410 CELSR2Q9HCU4 2923 aa4.11□□□□□ -1.75
ALMS1-207ENST00000614410 ZNF292O60281 2723 aa4.11□□□□□ -1.75
ALMS1-207ENST00000614410 CSMD2Q7Z408 3487 aa4.1□□□□□ -1.75
ALMS1-207ENST00000614410 SVEP1Q4LDE5 3571 aa4.09□□□□□ -1.75
ALMS1-207ENST00000614410 DCHS2Q6V1P9 2916 aa4.08□□□□□ -1.76
ALMS1-207ENST00000614410 TNP1P09430 55 aa4.07□□□□□ -1.76
ALMS1-207ENST00000614410 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
ALMS1-207ENST00000614410 HIVEP1P15822 2718 aa4.05□□□□□ -1.76
ALMS1-207ENST00000614410 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
ALMS1-207ENST00000614410 A6NN06 94 aa4.05□□□□□ -1.76
ALMS1-207ENST00000614410 KRTAP11-1Q8IUC1 163 aa4.03□□□□□ -1.76
ALMS1-207ENST00000614410 MUC3AQ02505 3323 aa4.02□□□□□ -1.77
ALMS1-207ENST00000614410 LCE6AA0A183 80 aa4.02□□□□□ -1.77
ALMS1-207ENST00000614410 KRTAP10-8P60410 259 aa4.02□□□□□ -1.77
ALMS1-207ENST00000614410 KRTAP4-16G5E9R7 235 aaPredicted RBP4.02□□□□□ -1.77
ALMS1-207ENST00000614410 A0A1B0GVY2 172 aa4□□□□□ -1.77
ALMS1-207ENST00000614410 ZFHX3Q15911 3703 aa3.99□□□□□ -1.77
ALMS1-207ENST00000614410 NIPBLQ6KC79 2804 aaeCLIP3.94□□□□□ -1.78
ALMS1-207ENST00000614410 TENM1Q9UKZ4 2725 aa3.93□□□□□ -1.78
ALMS1-207ENST00000614410 FBN2P35556 2912 aa3.93□□□□□ -1.78
ALMS1-207ENST00000614410 NF1P21359 2839 aa3.92□□□□□ -1.78
ALMS1-207ENST00000614410 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
ALMS1-207ENST00000614410 PDZD2O15018 2839 aa3.89□□□□□ -1.79
ALMS1-207ENST00000614410 KRTAP7-1Q8IUC3 87 aa3.88□□□□□ -1.79
ALMS1-207ENST00000614410 Q6ZRN7 208 aaPredicted RBP3.85□□□□□ -1.79
ALMS1-207ENST00000614410 CSMD3Q7Z407 3707 aa3.84□□□□□ -1.79
ALMS1-207ENST00000614410 P0C880 135 aa3.84□□□□□ -1.8
ALMS1-207ENST00000614410 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
ALMS1-207ENST00000614410 FLNCQ14315 2725 aa3.82□□□□□ -1.8
ALMS1-207ENST00000614410 H0YAA0 97 aa3.82□□□□□ -1.8
ALMS1-207ENST00000614410 KRTAP10-10P60014 251 aa3.82□□□□□ -1.8
ALMS1-207ENST00000614410 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
ALMS1-207ENST00000614410 TGP01266 2768 aa3.8□□□□□ -1.8
ALMS1-207ENST00000614410 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
ALMS1-207ENST00000614410 SRRM2Q9UQ35 2752 aaKnown RBP3.8□□□□□ -1.8
ALMS1-207ENST00000614410 TENM3Q9P273 2699 aa3.79□□□□□ -1.8
ALMS1-207ENST00000614410 ZANQ9Y493 2812 aa3.79□□□□□ -1.8
ALMS1-207ENST00000614410 VWFP04275 2813 aa3.77□□□□□ -1.81
ALMS1-207ENST00000614410 KRTAP13-1Q8IUC0 172 aa3.76□□□□□ -1.81
ALMS1-207ENST00000614410 VPS13CQ709C8 3753 aa3.76□□□□□ -1.81
ALMS1-207ENST00000614410 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
ALMS1-207ENST00000614410 XP32Q5T750 250 aa3.72□□□□□ -1.81
ALMS1-207ENST00000614410 MXRA5Q9NR99 2828 aa3.7□□□□□ -1.82
ALMS1-207ENST00000614410 BSNQ9UPA5 3926 aa3.69□□□□□ -1.82
ALMS1-207ENST00000614410 COL7A1Q02388 2944 aa3.69□□□□□ -1.82
ALMS1-207ENST00000614410 TENM4Q6N022 2769 aa3.67□□□□□ -1.82
ALMS1-207ENST00000614410 MEGF8Q7Z7M0 2845 aa3.66□□□□□ -1.82
ALMS1-207ENST00000614410 TRRAPQ9Y4A5 3859 aa3.65□□□□□ -1.82
ALMS1-207ENST00000614410 OTOGQ6ZRI0 2925 aa3.65□□□□□ -1.83
ALMS1-207ENST00000614410 TENM2Q9NT68 2774 aa3.62□□□□□ -1.83
ALMS1-207ENST00000614410 KRTAP12-2P59991 146 aa3.62□□□□□ -1.83
ALMS1-207ENST00000614410 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
ALMS1-207ENST00000614410 HRNRQ86YZ3 2850 aaPredicted RBP3.59□□□□□ -1.84
ALMS1-207ENST00000614410 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
ALMS1-207ENST00000614410 AKAP9Q99996 3911 aa3.56□□□□□ -1.84
ALMS1-207ENST00000614410 KRTAP15-1Q3LI76 137 aa3.53□□□□□ -1.84
ALMS1-207ENST00000614410 FBN1P35555 2871 aaKnown RBP3.52□□□□□ -1.85
ALMS1-207ENST00000614410 KRTAP13-3Q3SY46 172 aa3.52□□□□□ -1.85
ALMS1-207ENST00000614410 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
ALMS1-207ENST00000614410 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
ALMS1-207ENST00000614410 FBN3Q75N90 2809 aa3.49□□□□□ -1.85
ALMS1-207ENST00000614410 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
ALMS1-207ENST00000614410 ZNF469Q96JG9 3925 aaPredicted RBP3.45□□□□□ -1.86
ALMS1-207ENST00000614410 FRAS1Q86XX4 4008 aa3.41□□□□□ -1.86
ALMS1-207ENST00000614410 ANK3Q12955 4377 aaKnown RBP3.36□□□□□ -1.87
ALMS1-207ENST00000614410 KRTAP21-3Q3LHN1 58 aa3.36□□□□□ -1.87
ALMS1-207ENST00000614410 HUWE1Q7Z6Z7 4374 aaKnown RBP3.32□□□□□ -1.88
ALMS1-207ENST00000614410 KRTAP3-1Q9BYR8 98 aa3.32□□□□□ -1.88
ALMS1-207ENST00000614410 INE1O15225 51 aa3.29□□□□□ -1.88
ALMS1-207ENST00000614410 KRTAP10-6P60371 365 aaPredicted RBP3.24□□□□□ -1.89
ALMS1-207ENST00000614410 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
ALMS1-207ENST00000614410 DNAH2Q9P225 4427 aa3.22□□□□□ -1.89
ALMS1-207ENST00000614410 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
ALMS1-207ENST00000614410 KMT2AQ03164 3969 aa3.16□□□□□ -1.9
ALMS1-207ENST00000614410 CMYA5Q8N3K9 4069 aa3.14□□□□□ -1.91
ALMS1-207ENST00000614410 ALMS1Q8TCU4 4167 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms