RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 NDUFS5O43920 106 aa11.61□□□□□ -0.55
SMARCD2-212ENST00000613943 CDK2AP2O75956 126 aa11.61□□□□□ -0.55
SMARCD2-212ENST00000613943 ASB16-AS1Q495Z4 193 aa11.59□□□□□ -0.55
SMARCD2-212ENST00000613943 Q6ZSA8 131 aa11.59□□□□□ -0.55
SMARCD2-212ENST00000613943 KRTAP13-2Q52LG2 175 aa11.54□□□□□ -0.56
SMARCD2-212ENST00000613943 SACSQ9NZJ4 4579 aa11.54□□□□□ -0.56
SMARCD2-212ENST00000613943 PCOTHQ58A44 107 aa11.52□□□□□ -0.57
SMARCD2-212ENST00000613943 MRPL34Q9BQ48 92 aaKnown RBP11.52□□□□□ -0.57
SMARCD2-212ENST00000613943 CYP4F30PQ9H0H9 118 aa11.5□□□□□ -0.57
SMARCD2-212ENST00000613943 H3BPC8 53 aa11.49□□□□□ -0.57
SMARCD2-212ENST00000613943 SSBP3-AS1Q7Z2R9 100 aa11.48□□□□□ -0.57
SMARCD2-212ENST00000613943 TP53AIP1Q9HCN2 124 aa11.46□□□□□ -0.57
SMARCD2-212ENST00000613943 LINC00336Q6ZUF6 198 aa11.45□□□□□ -0.58
SMARCD2-212ENST00000613943 KRTAP1-4P0C5Y4 121 aa11.43□□□□□ -0.58
SMARCD2-212ENST00000613943 CD164Q04900 197 aa11.43□□□□□ -0.58
SMARCD2-212ENST00000613943 Q5W150 140 aa11.41□□□□□ -0.58
SMARCD2-212ENST00000613943 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
SMARCD2-212ENST00000613943 KRTAP21-3Q3LHN1 58 aa11.4□□□□□ -0.59
SMARCD2-212ENST00000613943 C1orf195Q5TG92 126 aa11.37□□□□□ -0.59
SMARCD2-212ENST00000613943 DYNC1H1Q14204 4646 aaKnown RBP11.35□□□□□ -0.59
SMARCD2-212ENST00000613943 PLA2G1BP04054 148 aaKnown RBP11.34□□□□□ -0.59
SMARCD2-212ENST00000613943 RETNLBQ9BQ08 111 aa11.34□□□□□ -0.59
SMARCD2-212ENST00000613943 IGLV7-46A0A075B6I9 117 aa11.33□□□□□ -0.6
SMARCD2-212ENST00000613943 PSPHP1O15172 72 aa11.32□□□□□ -0.6
SMARCD2-212ENST00000613943 SMR3BP02814 79 aaPredicted RBP11.32□□□□□ -0.6
SMARCD2-212ENST00000613943 FAT1Q14517 4588 aa11.31□□□□□ -0.6
SMARCD2-212ENST00000613943 LINC00313P59037 77 aa11.3□□□□□ -0.6
SMARCD2-212ENST00000613943 Q1T7F1 81 aa11.29□□□□□ -0.6
SMARCD2-212ENST00000613943 KRTAP13-3Q3SY46 172 aa11.28□□□□□ -0.6
SMARCD2-212ENST00000613943 COA5Q86WW8 74 aa11.27□□□□□ -0.6
SMARCD2-212ENST00000613943 BRK1Q8WUW1 75 aa11.27□□□□□ -0.6
SMARCD2-212ENST00000613943 TYMSOSQ8TAI1 123 aa11.27□□□□□ -0.61
SMARCD2-212ENST00000613943 Q8N9P0 234 aaPredicted RBP11.26□□□□□ -0.61
SMARCD2-212ENST00000613943 C8orf87E5RJ46 101 aa11.26□□□□□ -0.61
SMARCD2-212ENST00000613943 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
SMARCD2-212ENST00000613943 PRR26Q8N8Z3 221 aa11.23□□□□□ -0.61
SMARCD2-212ENST00000613943 A8MUN3 132 aa11.2□□□□□ -0.62
SMARCD2-212ENST00000613943 C4orf48Q5BLP8 95 aa11.2□□□□□ -0.62
SMARCD2-212ENST00000613943 APOBP04114 4563 aaKnown RBP11.2□□□□□ -0.62
SMARCD2-212ENST00000613943 LOC101927531A0A1B0GV80 90 aa11.2□□□□□ -0.62
SMARCD2-212ENST00000613943 LIMD2Q9BT23 127 aa11.19□□□□□ -0.62
SMARCD2-212ENST00000613943 KRTAP16-1A8MUX0 517 aa11.18□□□□□ -0.62
SMARCD2-212ENST00000613943 RYR2Q92736 4967 aa11.17□□□□□ -0.62
SMARCD2-212ENST00000613943 PRO0628Q9UI54 55 aa11.17□□□□□ -0.62
SMARCD2-212ENST00000613943 HRES1P13985 223 aa11.15□□□□□ -0.62
SMARCD2-212ENST00000613943 A0A1B0GVY2 172 aa11.13□□□□□ -0.63
SMARCD2-212ENST00000613943 SPINK1P00995 79 aa11.12□□□□□ -0.63
SMARCD2-212ENST00000613943 FAM229AH3BQW9 127 aa11.1□□□□□ -0.63
SMARCD2-212ENST00000613943 SEC61GP60059 68 aa11.1□□□□□ -0.63
SMARCD2-212ENST00000613943 Q5VV11 94 aa11.09□□□□□ -0.63
SMARCD2-212ENST00000613943 LINC00304Q8N9R0 145 aa11.09□□□□□ -0.63
SMARCD2-212ENST00000613943 SPAG11AQ6PDA7 123 aa11.09□□□□□ -0.63
SMARCD2-212ENST00000613943 PRR15LQ9BU68 103 aa11.09□□□□□ -0.63
SMARCD2-212ENST00000613943 V9GYY9 64 aa11.07□□□□□ -0.64
SMARCD2-212ENST00000613943 A8MU10 97 aa11.04□□□□□ -0.64
SMARCD2-212ENST00000613943 IGKV2D-30A0A075B6S6 120 aa11.03□□□□□ -0.64
SMARCD2-212ENST00000613943 IGKV2-30P06310 120 aa11.03□□□□□ -0.64
SMARCD2-212ENST00000613943 KRTAP10-4P60372 401 aaPredicted RBP11.03□□□□□ -0.64
SMARCD2-212ENST00000613943 PKHD1L1Q86WI1 4243 aa11□□□□□ -0.65
SMARCD2-212ENST00000613943 CHKB-CPT1BH3BT56 60 aa11□□□□□ -0.65
SMARCD2-212ENST00000613943 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
SMARCD2-212ENST00000613943 DMAC1Q96GE9 116 aa10.93□□□□□ -0.66
SMARCD2-212ENST00000613943 ACYP2P14621 99 aa10.93□□□□□ -0.66
SMARCD2-212ENST00000613943 LINC01558Q9Y6Z2 57 aa10.9□□□□□ -0.67
SMARCD2-212ENST00000613943 LRP1Q07954 4544 aaKnown RBP10.9□□□□□ -0.67
SMARCD2-212ENST00000613943 RPS29P62273 56 aaKnown RBP10.89□□□□□ -0.67
SMARCD2-212ENST00000613943 RYR3Q15413 4870 aa10.87□□□□□ -0.67
SMARCD2-212ENST00000613943 Q75L30 129 aa10.87□□□□□ -0.67
SMARCD2-212ENST00000613943 A6NED7 52 aa10.85□□□□□ -0.67
SMARCD2-212ENST00000613943 C7orf65Q6ZTY9 151 aa10.81□□□□□ -0.68
SMARCD2-212ENST00000613943 HSPG2P98160 4391 aa10.81□□□□□ -0.68
SMARCD2-212ENST00000613943 LCA10Q71F78 164 aa10.8□□□□□ -0.68
SMARCD2-212ENST00000613943 SPINK7P58062 85 aa10.78□□□□□ -0.68
SMARCD2-212ENST00000613943 Q8N1X5 172 aa10.78□□□□□ -0.68
SMARCD2-212ENST00000613943 FLG2Q5D862 2391 aaPredicted RBP10.76□□□□□ -0.69
SMARCD2-212ENST00000613943 TNXBP22105 4242 aa10.75□□□□□ -0.69
SMARCD2-212ENST00000613943 SPTSSBQ8NFR3 76 aa10.71□□□□□ -0.69
SMARCD2-212ENST00000613943 C20orf166-AS1Q96NR2 134 aa10.7□□□□□ -0.7
SMARCD2-212ENST00000613943 A8MUU9 505 aa10.69□□□□□ -0.7
SMARCD2-212ENST00000613943 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
SMARCD2-212ENST00000613943 Q5VSD8 79 aa10.67□□□□□ -0.7
SMARCD2-212ENST00000613943 KRTAP17-1Q9BYP8 105 aa10.67□□□□□ -0.7
SMARCD2-212ENST00000613943 MYCBP2O75592 4640 aa10.64□□□□□ -0.71
SMARCD2-212ENST00000613943 RYR1P21817 5038 aa10.63□□□□□ -0.71
SMARCD2-212ENST00000613943 CDC42SE1Q9NRR8 79 aa10.63□□□□□ -0.71
SMARCD2-212ENST00000613943 DMBT1Q9UGM3 2413 aaPredicted RBP10.62□□□□□ -0.71
SMARCD2-212ENST00000613943 A0A1B0GU69 56 aa10.62□□□□□ -0.71
SMARCD2-212ENST00000613943 KIAA1109Q2LD37 5005 aa10.61□□□□□ -0.71
SMARCD2-212ENST00000613943 PMAIP1Q13794 54 aa10.61□□□□□ -0.71
SMARCD2-212ENST00000613943 KRTAP10-8P60410 259 aa10.55□□□□□ -0.72
SMARCD2-212ENST00000613943 KRTAP3-1Q9BYR8 98 aa10.53□□□□□ -0.72
SMARCD2-212ENST00000613943 ATP11AUNQ6ZP68 121 aa10.52□□□□□ -0.72
SMARCD2-212ENST00000613943 EPPK1P58107 5090 aaKnown RBP10.48□□□□□ -0.73
SMARCD2-212ENST00000613943 A6NN06 94 aa10.41□□□□□ -0.74
SMARCD2-212ENST00000613943 UQCR11O14957 56 aa10.35□□□□□ -0.75
SMARCD2-212ENST00000613943 MIR22HGQ0VDD5 57 aa10.34□□□□□ -0.75
SMARCD2-212ENST00000613943 MT1HL1P0DM35 61 aa10.34□□□□□ -0.75
SMARCD2-212ENST00000613943 XP32Q5T750 250 aa10.34□□□□□ -0.75
SMARCD2-212ENST00000613943 SPATA8Q6RVD6 105 aa10.32□□□□□ -0.76
SMARCD2-212ENST00000613943 LPAP08519 4548 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms