RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 FAM236DA0A1B0GTK5 79 aa11.48□□□□□ -0.57
FAM228B-208ENST00000613899 C9JAW5 83 aa11.48□□□□□ -0.57
FAM228B-208ENST00000613899 FAM236CP0DP71 79 aa11.48□□□□□ -0.57
FAM228B-208ENST00000613899 J3KT08 172 aa11.46□□□□□ -0.57
FAM228B-208ENST00000613899 RBM12B-AS1Q9P1G2 102 aa11.46□□□□□ -0.57
FAM228B-208ENST00000613899 M0R143 59 aa11.45□□□□□ -0.58
FAM228B-208ENST00000613899 HRES1P13985 223 aa11.42□□□□□ -0.58
FAM228B-208ENST00000613899 ATXN8Q156A1 80 aa11.42□□□□□ -0.58
FAM228B-208ENST00000613899 MPLKIPQ8TAP9 179 aa11.42□□□□□ -0.58
FAM228B-208ENST00000613899 Q6ZQT0 140 aa11.41□□□□□ -0.58
FAM228B-208ENST00000613899 KRTAP9-8Q9BYQ0 159 aa11.41□□□□□ -0.58
FAM228B-208ENST00000613899 JMJD7-PLA2G4BH0Y9G9 81 aa11.39□□□□□ -0.59
FAM228B-208ENST00000613899 NDUFB1O75438 58 aa11.37□□□□□ -0.59
FAM228B-208ENST00000613899 A0A1B0GW54 56 aa11.36□□□□□ -0.59
FAM228B-208ENST00000613899 NAA38Q9BRA0 125 aaKnown RBP11.36□□□□□ -0.59
FAM228B-208ENST00000613899 ZCCHC13Q8WW36 166 aaKnown RBP11.35□□□□□ -0.59
FAM228B-208ENST00000613899 LOC110117498A0A087WWA1 95 aa11.34□□□□□ -0.59
FAM228B-208ENST00000613899 PDE6GP18545 87 aa11.33□□□□□ -0.6
FAM228B-208ENST00000613899 LYRM7Q5U5X0 104 aa11.3□□□□□ -0.6
FAM228B-208ENST00000613899 MTURNQ8N3F0 131 aa11.3□□□□□ -0.6
FAM228B-208ENST00000613899 A8MWP4 228 aa11.29□□□□□ -0.6
FAM228B-208ENST00000613899 Q8N9P0 234 aaPredicted RBP11.29□□□□□ -0.6
FAM228B-208ENST00000613899 SMIM6P0DI80 62 aa11.28□□□□□ -0.6
FAM228B-208ENST00000613899 C14orf132Q9NPU4 83 aa11.26□□□□□ -0.61
FAM228B-208ENST00000613899 C8orf17Q9NRJ1 99 aa11.26□□□□□ -0.61
FAM228B-208ENST00000613899 MT2AP02795 61 aa11.25□□□□□ -0.61
FAM228B-208ENST00000613899 SPINK7P58062 85 aa11.25□□□□□ -0.61
FAM228B-208ENST00000613899 IGKV3D-7A0A0C4DH55 119 aa11.22□□□□□ -0.61
FAM228B-208ENST00000613899 USH2AO75445 5202 aa11.18□□□□□ -0.62
FAM228B-208ENST00000613899 TSTD3H0UI37 97 aa11.18□□□□□ -0.62
FAM228B-208ENST00000613899 NREPQ16612 68 aa11.18□□□□□ -0.62
FAM228B-208ENST00000613899 Q6ZVQ6 151 aa11.18□□□□□ -0.62
FAM228B-208ENST00000613899 MT1FP04733 61 aa11.16□□□□□ -0.62
FAM228B-208ENST00000613899 BATFQ16520 125 aa11.16□□□□□ -0.62
FAM228B-208ENST00000613899 PRR15Q8IV56 129 aa11.16□□□□□ -0.62
FAM228B-208ENST00000613899 KRTAP10-10P60014 251 aa11.12□□□□□ -0.63
FAM228B-208ENST00000613899 WFDC13Q8IUB5 93 aa11.12□□□□□ -0.63
FAM228B-208ENST00000613899 H3BT86 120 aa11.1□□□□□ -0.63
FAM228B-208ENST00000613899 MMP24-AS1A0A0U1RRL7 71 aa11.09□□□□□ -0.63
FAM228B-208ENST00000613899 TMEM254Q8TBM7 123 aa11.09□□□□□ -0.63
FAM228B-208ENST00000613899 MRPL34Q9BQ48 92 aaKnown RBP11.08□□□□□ -0.64
FAM228B-208ENST00000613899 SSPOA2VEC9 5147 aa11.08□□□□□ -0.64
FAM228B-208ENST00000613899 C9orf118A6NHY6 69 aa11.05□□□□□ -0.64
FAM228B-208ENST00000613899 KRTAP9-3Q9BYQ3 159 aa11.05□□□□□ -0.64
FAM228B-208ENST00000613899 K7EQZ3 153 aa11.03□□□□□ -0.64
FAM228B-208ENST00000613899 A0A1W2PPM0 123 aa11.02□□□□□ -0.65
FAM228B-208ENST00000613899 hDV103S1A0JD37 113 aa11.02□□□□□ -0.65
FAM228B-208ENST00000613899 TAX1BP3O14907 124 aa10.99□□□□□ -0.65
FAM228B-208ENST00000613899 NDUFS5O43920 106 aa10.98□□□□□ -0.65
FAM228B-208ENST00000613899 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.97□□□□□ -0.65
FAM228B-208ENST00000613899 BPY2O14599 106 aa10.96□□□□□ -0.65
FAM228B-208ENST00000613899 KRTAP19-1Q8IUB9 90 aa10.9□□□□□ -0.66
FAM228B-208ENST00000613899 LOC105371267A0A1B0GV96 52 aa10.88□□□□□ -0.67
FAM228B-208ENST00000613899 H1FX-AS1Q4G0G2 97 aa10.88□□□□□ -0.67
FAM228B-208ENST00000613899 FCGBPQ9Y6R7 5405 aaPredicted RBP10.88□□□□□ -0.67
FAM228B-208ENST00000613899 KRTAP9-7A8MTY7 169 aa10.87□□□□□ -0.67
FAM228B-208ENST00000613899 C7orf65Q6ZTY9 151 aa10.86□□□□□ -0.67
FAM228B-208ENST00000613899 SPCS1Q9Y6A9 102 aa10.86□□□□□ -0.67
FAM228B-208ENST00000613899 IGKV2D-30A0A075B6S6 120 aa10.85□□□□□ -0.67
FAM228B-208ENST00000613899 IGKV2-30P06310 120 aa10.85□□□□□ -0.67
FAM228B-208ENST00000613899 CASC2Q6XLA1 102 aa10.83□□□□□ -0.68
FAM228B-208ENST00000613899 Q8N9L7 120 aa10.82□□□□□ -0.68
FAM228B-208ENST00000613899 Q5W150 140 aa10.81□□□□□ -0.68
FAM228B-208ENST00000613899 HCG22E2RYF7 251 aa10.79□□□□□ -0.68
FAM228B-208ENST00000613899 LINC00846Q9NV44 126 aa10.76□□□□□ -0.69
FAM228B-208ENST00000613899 CXCL6P80162 114 aa10.74□□□□□ -0.69
FAM228B-208ENST00000613899 UBL5Q9BZL1 73 aa10.73□□□□□ -0.69
FAM228B-208ENST00000613899 COL5A1-AS1Q5SY13 56 aa10.7□□□□□ -0.7
FAM228B-208ENST00000613899 KRTAP19-6Q3LI70 58 aa10.69□□□□□ -0.7
FAM228B-208ENST00000613899 PRO0461Q9UI25 63 aa10.68□□□□□ -0.7
FAM228B-208ENST00000613899 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
FAM228B-208ENST00000613899 K7EP34 96 aa10.65□□□□□ -0.7
FAM228B-208ENST00000613899 GTF2H5Q6ZYL4 71 aa10.52□□□□□ -0.73
FAM228B-208ENST00000613899 TP53AIP1Q9HCN2 124 aa10.51□□□□□ -0.73
FAM228B-208ENST00000613899 C5orf47Q569G3 176 aa10.5□□□□□ -0.73
FAM228B-208ENST00000613899 MACF1Q9UPN3 7388 aaKnown RBP10.49□□□□□ -0.73
FAM228B-208ENST00000613899 S4R3F8 94 aa10.48□□□□□ -0.73
FAM228B-208ENST00000613899 KRTAP3-1Q9BYR8 98 aa10.47□□□□□ -0.73
FAM228B-208ENST00000613899 F8W1H4 67 aa10.46□□□□□ -0.73
FAM228B-208ENST00000613899 C1orf64Q8NEQ6 169 aa10.46□□□□□ -0.73
FAM228B-208ENST00000613899 FAM236AA0A1B0GUQ0 79 aa10.44□□□□□ -0.74
FAM228B-208ENST00000613899 FAM236BA0A1B0GV22 79 aa10.44□□□□□ -0.74
FAM228B-208ENST00000613899 SYNE2Q8WXH0 6885 aaKnown RBP10.42□□□□□ -0.74
FAM228B-208ENST00000613899 ETDBQ3ZM63 59 aa10.42□□□□□ -0.74
FAM228B-208ENST00000613899 CSAG1Q6PB30 78 aa10.41□□□□□ -0.74
FAM228B-208ENST00000613899 LCA10Q71F78 164 aa10.38□□□□□ -0.75
FAM228B-208ENST00000613899 PCP4L1A6NKN8 68 aa10.29□□□□□ -0.76
FAM228B-208ENST00000613899 CYP4F30PQ9H0H9 118 aa10.28□□□□□ -0.76
FAM228B-208ENST00000613899 TRAV22A0A0B4J277 110 aa10.27□□□□□ -0.77
FAM228B-208ENST00000613899 LOC100996750A0A140TA64 210 aa10.25□□□□□ -0.77
FAM228B-208ENST00000613899 SPRR2GQ9BYE4 73 aa10.25□□□□□ -0.77
FAM228B-208ENST00000613899 KRTAP4-6Q9BYQ5 205 aa10.25□□□□□ -0.77
FAM228B-208ENST00000613899 LOC101927531A0A1B0GV80 90 aa10.24□□□□□ -0.77
FAM228B-208ENST00000613899 ACYP1P07311 99 aa10.24□□□□□ -0.77
FAM228B-208ENST00000613899 Q5VV11 94 aa10.24□□□□□ -0.77
FAM228B-208ENST00000613899 KRTAP6-3Q3LI67 103 aa10.23□□□□□ -0.77
FAM228B-208ENST00000613899 MT1BP07438 61 aa10.21□□□□□ -0.77
FAM228B-208ENST00000613899 ATP5EP2Q5VTU8 51 aa10.21□□□□□ -0.77
FAM228B-208ENST00000613899 KLKP1Q107X0 134 aa10.2□□□□□ -0.78
FAM228B-208ENST00000613899 KRTAP19-8Q3LI54 63 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms