RNA–Protein interactions for RNA: ENST00000613647.4

FGFR3-210, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 5 BASIC

Gene FGFR3, Length 4,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-210ENST00000613647 SMG1Q96Q15 3661 aaKnown RBP11.64□□□□□ -0.55
FGFR3-210ENST00000613647 RBM12B-AS1Q9P1G2 102 aa11.63□□□□□ -0.55
FGFR3-210ENST00000613647 A0A087X002 238 aa11.63□□□□□ -0.55
FGFR3-210ENST00000613647 CSMD1Q96PZ7 3565 aa11.63□□□□□ -0.55
FGFR3-210ENST00000613647 LCE6AA0A183 80 aa11.62□□□□□ -0.55
FGFR3-210ENST00000613647 PDZD2O15018 2839 aa11.59□□□□□ -0.55
FGFR3-210ENST00000613647 VWFP04275 2813 aa11.59□□□□□ -0.55
FGFR3-210ENST00000613647 LINC01558Q9Y6Z2 57 aa11.59□□□□□ -0.55
FGFR3-210ENST00000613647 A0A0D9SG42 100 aa11.58□□□□□ -0.56
FGFR3-210ENST00000613647 Q75L30 129 aa11.56□□□□□ -0.56
FGFR3-210ENST00000613647 KTN1-AS1Q86SY8 53 aa11.56□□□□□ -0.56
FGFR3-210ENST00000613647 OTOGQ6ZRI0 2925 aa11.56□□□□□ -0.56
FGFR3-210ENST00000613647 NOTCH2NLQ7Z3S9 236 aa11.55□□□□□ -0.56
FGFR3-210ENST00000613647 Q6ZSA8 131 aa11.54□□□□□ -0.56
FGFR3-210ENST00000613647 SPINK7P58062 85 aa11.54□□□□□ -0.56
FGFR3-210ENST00000613647 Q5VV11 94 aa11.51□□□□□ -0.57
FGFR3-210ENST00000613647 LINC01554Q52M75 96 aa11.5□□□□□ -0.57
FGFR3-210ENST00000613647 A0A1B0GU33 70 aa11.48□□□□□ -0.57
FGFR3-210ENST00000613647 KRTAP13-1Q8IUC0 172 aa11.46□□□□□ -0.57
FGFR3-210ENST00000613647 Q5VSD8 79 aa11.46□□□□□ -0.58
FGFR3-210ENST00000613647 SPINT4Q6UDR6 99 aa11.46□□□□□ -0.58
FGFR3-210ENST00000613647 CUBNO60494 3623 aa11.45□□□□□ -0.58
FGFR3-210ENST00000613647 SVEP1Q4LDE5 3571 aa11.45□□□□□ -0.58
FGFR3-210ENST00000613647 CRIPTQ9P021 101 aa11.42□□□□□ -0.58
FGFR3-210ENST00000613647 TGP01266 2768 aa11.42□□□□□ -0.58
FGFR3-210ENST00000613647 LCA10Q71F78 164 aa11.39□□□□□ -0.59
FGFR3-210ENST00000613647 TENM2Q9NT68 2774 aa11.38□□□□□ -0.59
FGFR3-210ENST00000613647 DMAC1Q96GE9 116 aa11.38□□□□□ -0.59
FGFR3-210ENST00000613647 ZFHX3Q15911 3703 aa11.34□□□□□ -0.59
FGFR3-210ENST00000613647 KRTAP13-2Q52LG2 175 aa11.32□□□□□ -0.6
FGFR3-210ENST00000613647 NBPF19A0A087WUL8 3843 aa11.31□□□□□ -0.6
FGFR3-210ENST00000613647 ASB16-AS1Q495Z4 193 aa11.3□□□□□ -0.6
FGFR3-210ENST00000613647 CSAG1Q6PB30 78 aa11.26□□□□□ -0.61
FGFR3-210ENST00000613647 CSMD2Q7Z408 3487 aa11.24□□□□□ -0.61
FGFR3-210ENST00000613647 S4R3F8 94 aa11.23□□□□□ -0.61
FGFR3-210ENST00000613647 PRAC1Q96KF2 57 aa11.17□□□□□ -0.62
FGFR3-210ENST00000613647 SPENQ96T58 3664 aaKnown RBP11.15□□□□□ -0.62
FGFR3-210ENST00000613647 SEC61BP60468 96 aaKnown RBP11.09□□□□□ -0.63
FGFR3-210ENST00000613647 RPS29P62273 56 aaKnown RBP11.09□□□□□ -0.63
FGFR3-210ENST00000613647 CAMK2N1Q7Z7J9 78 aa11.06□□□□□ -0.64
FGFR3-210ENST00000613647 SRRM2Q9UQ35 2752 aaKnown RBP11.05□□□□□ -0.64
FGFR3-210ENST00000613647 KRTAP21-3Q3LHN1 58 aa11.04□□□□□ -0.64
FGFR3-210ENST00000613647 M0R2T5 61 aa11.01□□□□□ -0.65
FGFR3-210ENST00000613647 R4GN34 69 aa11.01□□□□□ -0.65
FGFR3-210ENST00000613647 H1FX-AS1Q4G0G2 97 aa10.99□□□□□ -0.65
FGFR3-210ENST00000613647 SPATA8Q6RVD6 105 aa10.96□□□□□ -0.65
FGFR3-210ENST00000613647 RPL37P61927 97 aaKnown RBP10.96□□□□□ -0.65
FGFR3-210ENST00000613647 KRTAP1-4P0C5Y4 121 aa10.92□□□□□ -0.66
FGFR3-210ENST00000613647 A8MU10 97 aa10.88□□□□□ -0.67
FGFR3-210ENST00000613647 BSNQ9UPA5 3926 aa10.84□□□□□ -0.67
FGFR3-210ENST00000613647 M0QZ58 72 aa10.83□□□□□ -0.68
FGFR3-210ENST00000613647 ADM2Q7Z4H4 148 aa10.83□□□□□ -0.68
FGFR3-210ENST00000613647 TRRAPQ9Y4A5 3859 aa10.81□□□□□ -0.68
FGFR3-210ENST00000613647 FBN3Q75N90 2809 aa10.81□□□□□ -0.68
FGFR3-210ENST00000613647 A8MUU9 505 aa10.78□□□□□ -0.68
FGFR3-210ENST00000613647 ROMO1P60602 79 aa10.75□□□□□ -0.69
FGFR3-210ENST00000613647 C20orf166-AS1Q96NR2 134 aa10.75□□□□□ -0.69
FGFR3-210ENST00000613647 A6NN06 94 aa10.69□□□□□ -0.7
FGFR3-210ENST00000613647 ANK3Q12955 4377 aaKnown RBP10.65□□□□□ -0.7
FGFR3-210ENST00000613647 LUZP6Q538Z0 58 aa10.65□□□□□ -0.71
FGFR3-210ENST00000613647 COL7A1Q02388 2944 aa10.59□□□□□ -0.71
FGFR3-210ENST00000613647 KRTAP16-1A8MUX0 517 aa10.57□□□□□ -0.72
FGFR3-210ENST00000613647 MEGF8Q7Z7M0 2845 aa10.54□□□□□ -0.72
FGFR3-210ENST00000613647 XP32Q5T750 250 aa10.5□□□□□ -0.73
FGFR3-210ENST00000613647 KRTAP25-1Q3LHN0 102 aa10.37□□□□□ -0.75
FGFR3-210ENST00000613647 VPS13CQ709C8 3753 aa10.35□□□□□ -0.75
FGFR3-210ENST00000613647 KRTAP13-3Q3SY46 172 aa10.34□□□□□ -0.75
FGFR3-210ENST00000613647 PLAC4Q8WY50 150 aa10.32□□□□□ -0.76
FGFR3-210ENST00000613647 A0A1B0GVY2 172 aa10.3□□□□□ -0.76
FGFR3-210ENST00000613647 H3BS24 57 aa10.24□□□□□ -0.77
FGFR3-210ENST00000613647 H0YAA0 97 aa10.23□□□□□ -0.77
FGFR3-210ENST00000613647 TPRXLQ17RH7 258 aa10.23□□□□□ -0.77
FGFR3-210ENST00000613647 KRTAP10-8P60410 259 aa10.22□□□□□ -0.77
FGFR3-210ENST00000613647 ZNF469Q96JG9 3925 aaPredicted RBP10.17□□□□□ -0.78
FGFR3-210ENST00000613647 P0C880 135 aa10.08□□□□□ -0.8
FGFR3-210ENST00000613647 C10orf95Q9H7T3 257 aa9.99□□□□□ -0.81
FGFR3-210ENST00000613647 A0A0A0MQY5 61 aa9.96□□□□□ -0.81
FGFR3-210ENST00000613647 TNP1P09430 55 aa9.94□□□□□ -0.82
FGFR3-210ENST00000613647 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.82
FGFR3-210ENST00000613647 KRTAP3-1Q9BYR8 98 aa9.86□□□□□ -0.83
FGFR3-210ENST00000613647 HUWE1Q7Z6Z7 4374 aaKnown RBP9.86□□□□□ -0.83
FGFR3-210ENST00000613647 NDUFAF8A1L188 74 aa9.84□□□□□ -0.83
FGFR3-210ENST00000613647 KRTAP10-10P60014 251 aa9.68□□□□□ -0.86
FGFR3-210ENST00000613647 AKAP9Q99996 3911 aa9.68□□□□□ -0.86
FGFR3-210ENST00000613647 PP632Q6XCG6 107 aa9.66□□□□□ -0.86
FGFR3-210ENST00000613647 KRTAP12-2P59991 146 aa9.6□□□□□ -0.87
FGFR3-210ENST00000613647 MT1HL1P0DM35 61 aa9.56□□□□□ -0.88
FGFR3-210ENST00000613647 KRTAP10-4P60372 401 aaPredicted RBP9.55□□□□□ -0.88
FGFR3-210ENST00000613647 DNAH9Q9NYC9 4486 aa9.53□□□□□ -0.88
FGFR3-210ENST00000613647 KRTAP12-1P59990 96 aa9.49□□□□□ -0.89
FGFR3-210ENST00000613647 KRTAP10-6P60371 365 aaPredicted RBP9.49□□□□□ -0.89
FGFR3-210ENST00000613647 DNHD1Q96M86 4753 aa9.47□□□□□ -0.89
FGFR3-210ENST00000613647 KRTAP13-4Q3LI77 160 aa9.45□□□□□ -0.9
FGFR3-210ENST00000613647 PLECQ15149 4684 aaKnown RBP9.4□□□□□ -0.9
FGFR3-210ENST00000613647 DNAH5Q8TE73 4624 aa9.35□□□□□ -0.91
FGFR3-210ENST00000613647 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
FGFR3-210ENST00000613647 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
FGFR3-210ENST00000613647 KRTAP3-3Q9BYR6 98 aa9.28□□□□□ -0.92
FGFR3-210ENST00000613647 DNAH1Q9P2D7 4330 aa9.26□□□□□ -0.93
FGFR3-210ENST00000613647 PRO2289Q9P1D8 64 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms