RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 PRR15Q8IV56 129 aa11.39□□□□□ -0.59
CPNE9-205ENST00000613455 PCLOQ9Y6V0 5065 aa11.37□□□□□ -0.59
CPNE9-205ENST00000613455 A0A1B0GVX0 72 aa11.35□□□□□ -0.59
CPNE9-205ENST00000613455 NDUFB1O75438 58 aa11.35□□□□□ -0.59
CPNE9-205ENST00000613455 J3QL48 77 aa11.35□□□□□ -0.59
CPNE9-205ENST00000613455 IGHV6-1A0A0B4J1U7 121 aa11.32□□□□□ -0.6
CPNE9-205ENST00000613455 NOTCH2NLQ7Z3S9 236 aa11.29□□□□□ -0.6
CPNE9-205ENST00000613455 MMP24-AS1A0A0U1RRL7 71 aa11.28□□□□□ -0.6
CPNE9-205ENST00000613455 C8orf17Q9NRJ1 99 aa11.27□□□□□ -0.61
CPNE9-205ENST00000613455 HCG22E2RYF7 251 aa11.26□□□□□ -0.61
CPNE9-205ENST00000613455 FP248Q71RG6 208 aaPredicted RBP11.24□□□□□ -0.61
CPNE9-205ENST00000613455 FAM236AA0A1B0GUQ0 79 aa11.23□□□□□ -0.61
CPNE9-205ENST00000613455 FAM236BA0A1B0GV22 79 aa11.23□□□□□ -0.61
CPNE9-205ENST00000613455 C8orf87E5RJ46 101 aa11.23□□□□□ -0.61
CPNE9-205ENST00000613455 WFDC13Q8IUB5 93 aa11.22□□□□□ -0.61
CPNE9-205ENST00000613455 LINC00313P59037 77 aa11.2□□□□□ -0.62
CPNE9-205ENST00000613455 hDV103S1A0JD37 113 aa11.19□□□□□ -0.62
CPNE9-205ENST00000613455 CASC2Q6XLA1 102 aa11.19□□□□□ -0.62
CPNE9-205ENST00000613455 IGLV7-46A0A075B6I9 117 aa11.17□□□□□ -0.62
CPNE9-205ENST00000613455 KRTAP16-1A8MUX0 517 aa11.15□□□□□ -0.62
CPNE9-205ENST00000613455 C9orf92A6NGG3 77 aa11.15□□□□□ -0.63
CPNE9-205ENST00000613455 SCGB1A1P11684 91 aa11.15□□□□□ -0.63
CPNE9-205ENST00000613455 PRR4Q16378 134 aa11.15□□□□□ -0.63
CPNE9-205ENST00000613455 TMEM254Q8TBM7 123 aa11.13□□□□□ -0.63
CPNE9-205ENST00000613455 MRPL34Q9BQ48 92 aaKnown RBP11.12□□□□□ -0.63
CPNE9-205ENST00000613455 KRTAP13-3Q3SY46 172 aa11.09□□□□□ -0.63
CPNE9-205ENST00000613455 ATOX1O00244 68 aa11.07□□□□□ -0.64
CPNE9-205ENST00000613455 HERC1Q15751 4861 aa11.05□□□□□ -0.64
CPNE9-205ENST00000613455 Q8N9P0 234 aaPredicted RBP11.05□□□□□ -0.64
CPNE9-205ENST00000613455 OCR1Q9BZK8 76 aa11.04□□□□□ -0.64
CPNE9-205ENST00000613455 TPRXLQ17RH7 258 aa11.03□□□□□ -0.64
CPNE9-205ENST00000613455 NDUFS5O43920 106 aa11.01□□□□□ -0.65
CPNE9-205ENST00000613455 C20orf166-AS1Q96NR2 134 aa11□□□□□ -0.65
CPNE9-205ENST00000613455 LPAP08519 4548 aa10.98□□□□□ -0.65
CPNE9-205ENST00000613455 A8MUU9 505 aa10.97□□□□□ -0.65
CPNE9-205ENST00000613455 XP32Q5T750 250 aa10.97□□□□□ -0.65
CPNE9-205ENST00000613455 SMIM20Q8N5G0 67 aa10.96□□□□□ -0.65
CPNE9-205ENST00000613455 TRAV7A0A075B6U4 112 aa10.95□□□□□ -0.66
CPNE9-205ENST00000613455 ANAPC13Q9BS18 74 aa10.95□□□□□ -0.66
CPNE9-205ENST00000613455 TP53AIP1Q9HCN2 124 aa10.94□□□□□ -0.66
CPNE9-205ENST00000613455 Q75L30 129 aa10.92□□□□□ -0.66
CPNE9-205ENST00000613455 SERP2Q8N6R1 65 aa10.92□□□□□ -0.66
CPNE9-205ENST00000613455 UQCRQO14949 82 aa10.92□□□□□ -0.66
CPNE9-205ENST00000613455 HMCN2Q8NDA2 5059 aa10.89□□□□□ -0.67
CPNE9-205ENST00000613455 Q5W150 140 aa10.88□□□□□ -0.67
CPNE9-205ENST00000613455 LRP2P98164 4655 aa10.87□□□□□ -0.67
CPNE9-205ENST00000613455 RPL37P61927 97 aaKnown RBP10.87□□□□□ -0.67
CPNE9-205ENST00000613455 TRAV22A0A0B4J277 110 aa10.84□□□□□ -0.67
CPNE9-205ENST00000613455 COX7CP15954 63 aa10.84□□□□□ -0.67
CPNE9-205ENST00000613455 ZCCHC13Q8WW36 166 aaKnown RBP10.83□□□□□ -0.68
CPNE9-205ENST00000613455 H0Y9P7 68 aa10.81□□□□□ -0.68
CPNE9-205ENST00000613455 C5orf47Q569G3 176 aa10.81□□□□□ -0.68
CPNE9-205ENST00000613455 PCP4P48539 62 aa10.76□□□□□ -0.69
CPNE9-205ENST00000613455 MP68P56378 58 aa10.75□□□□□ -0.69
CPNE9-205ENST00000613455 ATP11AUNQ6ZP68 121 aa10.75□□□□□ -0.69
CPNE9-205ENST00000613455 CCDC179H3BU77 68 aa10.74□□□□□ -0.69
CPNE9-205ENST00000613455 C20orf197Q8N268 126 aa10.74□□□□□ -0.69
CPNE9-205ENST00000613455 A0A0U1RQV1 116 aa10.72□□□□□ -0.69
CPNE9-205ENST00000613455 LINC00208Q96KT6 92 aa10.72□□□□□ -0.69
CPNE9-205ENST00000613455 H3BPC8 53 aa10.7□□□□□ -0.7
CPNE9-205ENST00000613455 C1orf64Q8NEQ6 169 aa10.7□□□□□ -0.7
CPNE9-205ENST00000613455 SNURFQ9Y675 71 aa10.7□□□□□ -0.7
CPNE9-205ENST00000613455 PCOTHQ58A44 107 aa10.69□□□□□ -0.7
CPNE9-205ENST00000613455 KLKP1Q107X0 134 aa10.67□□□□□ -0.7
CPNE9-205ENST00000613455 IGKV2-30P06310 120 aa10.66□□□□□ -0.7
CPNE9-205ENST00000613455 LOC101927531A0A1B0GV80 90 aa10.65□□□□□ -0.7
CPNE9-205ENST00000613455 CYSTM1Q9H1C7 97 aa10.64□□□□□ -0.71
CPNE9-205ENST00000613455 IGKV2D-30A0A075B6S6 120 aa10.63□□□□□ -0.71
CPNE9-205ENST00000613455 MUC17Q685J3 4493 aa10.63□□□□□ -0.71
CPNE9-205ENST00000613455 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
CPNE9-205ENST00000613455 CYP4F30PQ9H0H9 118 aa10.61□□□□□ -0.71
CPNE9-205ENST00000613455 C7orf65Q6ZTY9 151 aa10.59□□□□□ -0.71
CPNE9-205ENST00000613455 SPINK7P58062 85 aa10.57□□□□□ -0.72
CPNE9-205ENST00000613455 H7BZZ5 65 aa10.52□□□□□ -0.73
CPNE9-205ENST00000613455 NDUFC1O43677 76 aa10.49□□□□□ -0.73
CPNE9-205ENST00000613455 KRTAP4-1Q9BYQ7 146 aa10.47□□□□□ -0.73
CPNE9-205ENST00000613455 HRES1P13985 223 aa10.44□□□□□ -0.74
CPNE9-205ENST00000613455 UBR4Q5T4S7 5183 aa10.43□□□□□ -0.74
CPNE9-205ENST00000613455 C4orf26Q17RF5 130 aa10.37□□□□□ -0.75
CPNE9-205ENST00000613455 SPANXA2-OT1Q8N9U9 137 aa10.36□□□□□ -0.75
CPNE9-205ENST00000613455 MUC2Q02817 5179 aa10.35□□□□□ -0.75
CPNE9-205ENST00000613455 MPLKIPQ8TAP9 179 aa10.33□□□□□ -0.76
CPNE9-205ENST00000613455 TMEM258P61165 79 aa10.33□□□□□ -0.76
CPNE9-205ENST00000613455 RNF213Q63HN8 5207 aa10.3□□□□□ -0.76
CPNE9-205ENST00000613455 FAM236DA0A1B0GTK5 79 aa10.27□□□□□ -0.77
CPNE9-205ENST00000613455 FAM236CP0DP71 79 aa10.27□□□□□ -0.77
CPNE9-205ENST00000613455 COX6B2Q6YFQ2 88 aa10.27□□□□□ -0.77
CPNE9-205ENST00000613455 KRTAP3-1Q9BYR8 98 aa10.27□□□□□ -0.77
CPNE9-205ENST00000613455 DMAC1Q96GE9 116 aa10.25□□□□□ -0.77
CPNE9-205ENST00000613455 ATP5EP56381 51 aaPredicted RBP10.22□□□□□ -0.77
CPNE9-205ENST00000613455 RBM12B-AS1Q9P1G2 102 aa10.21□□□□□ -0.77
CPNE9-205ENST00000613455 A8MUN3 132 aa10.18□□□□□ -0.78
CPNE9-205ENST00000613455 KRTAP19-2Q3LHN2 52 aa10.18□□□□□ -0.78
CPNE9-205ENST00000613455 ACYP2P14621 99 aa10.12□□□□□ -0.79
CPNE9-205ENST00000613455 H1FX-AS1Q4G0G2 97 aa10.08□□□□□ -0.8
CPNE9-205ENST00000613455 COA5Q86WW8 74 aa10.05□□□□□ -0.8
CPNE9-205ENST00000613455 LCE2CQ5TA81 110 aa10□□□□□ -0.81
CPNE9-205ENST00000613455 SERP1Q9Y6X1 66 aa10□□□□□ -0.81
CPNE9-205ENST00000613455 FLGP20930 4061 aaPredicted RBP9.99□□□□□ -0.81
CPNE9-205ENST00000613455 S4R3F8 94 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms