RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 Q75L30 129 aa8.87□□□□□ -0.99
IRF1-211ENST00000613424 IGHV6-1A0A0B4J1U7 121 aa8.86□□□□□ -0.99
IRF1-211ENST00000613424 F8W1H4 67 aa8.86□□□□□ -0.99
IRF1-211ENST00000613424 NOTCH2NLQ7Z3S9 236 aa8.86□□□□□ -0.99
IRF1-211ENST00000613424 A0A1B0GVX0 72 aa8.85□□□□□ -0.99
IRF1-211ENST00000613424 C20orf166-AS1Q96NR2 134 aa8.85□□□□□ -0.99
IRF1-211ENST00000613424 A8MUU9 505 aa8.83□□□□□ -1
IRF1-211ENST00000613424 A0A0U1RQV1 116 aa8.82□□□□□ -1
IRF1-211ENST00000613424 KRTAP16-1A8MUX0 517 aa8.82□□□□□ -1
IRF1-211ENST00000613424 FAT4Q6V0I7 4981 aa8.81□□□□□ -1
IRF1-211ENST00000613424 NDUFB1O75438 58 aa8.81□□□□□ -1
IRF1-211ENST00000613424 ATP11AUNQ6ZP68 121 aa8.81□□□□□ -1
IRF1-211ENST00000613424 C8orf87E5RJ46 101 aa8.8□□□□□ -1
IRF1-211ENST00000613424 A8MWP4 228 aa8.79□□□□□ -1
IRF1-211ENST00000613424 ETDBQ3ZM63 59 aa8.78□□□□□ -1
IRF1-211ENST00000613424 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1.01
IRF1-211ENST00000613424 Q6ZVQ6 151 aa8.75□□□□□ -1.01
IRF1-211ENST00000613424 PRR15Q8IV56 129 aa8.74□□□□□ -1.01
IRF1-211ENST00000613424 C8orf17Q9NRJ1 99 aa8.73□□□□□ -1.01
IRF1-211ENST00000613424 LINC00846Q9NV44 126 aa8.73□□□□□ -1.01
IRF1-211ENST00000613424 BPY2O14599 106 aa8.72□□□□□ -1.01
IRF1-211ENST00000613424 A0A1B0GV90 55 aa8.7□□□□□ -1.02
IRF1-211ENST00000613424 K7EQZ3 153 aa8.69□□□□□ -1.02
IRF1-211ENST00000613424 UBL5Q9BZL1 73 aa8.68□□□□□ -1.02
IRF1-211ENST00000613424 MMP24-AS1A0A0U1RRL7 71 aa8.65□□□□□ -1.02
IRF1-211ENST00000613424 Q8N9P0 234 aaPredicted RBP8.65□□□□□ -1.02
IRF1-211ENST00000613424 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
IRF1-211ENST00000613424 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
IRF1-211ENST00000613424 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
IRF1-211ENST00000613424 Q8N9L7 120 aa8.62□□□□□ -1.03
IRF1-211ENST00000613424 hDV103S1A0JD37 113 aa8.6□□□□□ -1.03
IRF1-211ENST00000613424 TMEM254Q8TBM7 123 aa8.6□□□□□ -1.03
IRF1-211ENST00000613424 MRPL34Q9BQ48 92 aaKnown RBP8.6□□□□□ -1.03
IRF1-211ENST00000613424 ZCCHC13Q8WW36 166 aaKnown RBP8.59□□□□□ -1.03
IRF1-211ENST00000613424 ACYP1P07311 99 aa8.56□□□□□ -1.04
IRF1-211ENST00000613424 WFDC13Q8IUB5 93 aa8.54□□□□□ -1.04
IRF1-211ENST00000613424 FAM240AA0A1B0GVK7 77 aa8.52□□□□□ -1.05
IRF1-211ENST00000613424 CXCL6P80162 114 aa8.52□□□□□ -1.05
IRF1-211ENST00000613424 CASC2Q6XLA1 102 aa8.52□□□□□ -1.05
IRF1-211ENST00000613424 COX6B2Q6YFQ2 88 aa8.52□□□□□ -1.05
IRF1-211ENST00000613424 NDUFS5O43920 106 aa8.51□□□□□ -1.05
IRF1-211ENST00000613424 HCG22E2RYF7 251 aa8.48□□□□□ -1.05
IRF1-211ENST00000613424 MT1HP80294 61 aa8.48□□□□□ -1.05
IRF1-211ENST00000613424 FLGP20930 4061 aaPredicted RBP8.46□□□□□ -1.06
IRF1-211ENST00000613424 HRES1P13985 223 aa8.46□□□□□ -1.06
IRF1-211ENST00000613424 SPINK7P58062 85 aa8.46□□□□□ -1.06
IRF1-211ENST00000613424 MPLKIPQ8TAP9 179 aa8.43□□□□□ -1.06
IRF1-211ENST00000613424 Q5W150 140 aa8.42□□□□□ -1.06
IRF1-211ENST00000613424 ATP5EP2Q5VTU8 51 aa8.39□□□□□ -1.07
IRF1-211ENST00000613424 RBM12B-AS1Q9P1G2 102 aa8.39□□□□□ -1.07
IRF1-211ENST00000613424 LINC00643Q86TS7 51 aa8.37□□□□□ -1.07
IRF1-211ENST00000613424 FAM236DA0A1B0GTK5 79 aa8.36□□□□□ -1.07
IRF1-211ENST00000613424 FAM236CP0DP71 79 aa8.36□□□□□ -1.07
IRF1-211ENST00000613424 J3QR89 54 aa8.35□□□□□ -1.07
IRF1-211ENST00000613424 M0R2T5 61 aa8.35□□□□□ -1.07
IRF1-211ENST00000613424 HIST1H4AP62805 103 aaKnown RBP8.33□□□□□ -1.08
IRF1-211ENST00000613424 IGKV2D-30A0A075B6S6 120 aa8.31□□□□□ -1.08
IRF1-211ENST00000613424 IGKV2-30P06310 120 aa8.31□□□□□ -1.08
IRF1-211ENST00000613424 TP53AIP1Q9HCN2 124 aa8.31□□□□□ -1.08
IRF1-211ENST00000613424 C7orf65Q6ZTY9 151 aa8.29□□□□□ -1.08
IRF1-211ENST00000613424 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
IRF1-211ENST00000613424 A0A087WVE0 104 aa8.26□□□□□ -1.09
IRF1-211ENST00000613424 LORP23490 312 aaPredicted RBP8.25□□□□□ -1.09
IRF1-211ENST00000613424 K7ERU9 68 aa8.17□□□□□ -1.1
IRF1-211ENST00000613424 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
IRF1-211ENST00000613424 UQCRQO14949 82 aa8.15□□□□□ -1.1
IRF1-211ENST00000613424 C4orf26Q17RF5 130 aa8.15□□□□□ -1.1
IRF1-211ENST00000613424 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
IRF1-211ENST00000613424 H1FX-AS1Q4G0G2 97 aa8.13□□□□□ -1.11
IRF1-211ENST00000613424 CYP4F30PQ9H0H9 118 aa8.1□□□□□ -1.11
IRF1-211ENST00000613424 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
IRF1-211ENST00000613424 LOC101927531A0A1B0GV80 90 aa8.08□□□□□ -1.12
IRF1-211ENST00000613424 H0Y9P7 68 aa8.08□□□□□ -1.12
IRF1-211ENST00000613424 LCE2DQ5TA82 110 aaPredicted RBP8.08□□□□□ -1.12
IRF1-211ENST00000613424 OCR1Q9BZK8 76 aa8.07□□□□□ -1.12
IRF1-211ENST00000613424 ATOX1O00244 68 aa8.06□□□□□ -1.12
IRF1-211ENST00000613424 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
IRF1-211ENST00000613424 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
IRF1-211ENST00000613424 IMUPQ9GZP8 106 aa8.05□□□□□ -1.12
IRF1-211ENST00000613424 C1orf64Q8NEQ6 169 aa8.04□□□□□ -1.12
IRF1-211ENST00000613424 SCGB1A1P11684 91 aa8.02□□□□□ -1.13
IRF1-211ENST00000613424 MT2AP02795 61 aa7.98□□□□□ -1.13
IRF1-211ENST00000613424 C5orf47Q569G3 176 aa7.98□□□□□ -1.13
IRF1-211ENST00000613424 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
IRF1-211ENST00000613424 MP68P56378 58 aa7.97□□□□□ -1.13
IRF1-211ENST00000613424 MT1FP04733 61 aa7.93□□□□□ -1.14
IRF1-211ENST00000613424 KLKP1Q107X0 134 aa7.91□□□□□ -1.14
IRF1-211ENST00000613424 S4R3F8 94 aa7.91□□□□□ -1.14
IRF1-211ENST00000613424 FAM236AA0A1B0GUQ0 79 aa7.9□□□□□ -1.14
IRF1-211ENST00000613424 FAM236BA0A1B0GV22 79 aa7.9□□□□□ -1.14
IRF1-211ENST00000613424 H3BPC8 53 aa7.9□□□□□ -1.14
IRF1-211ENST00000613424 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
IRF1-211ENST00000613424 LCA10Q71F78 164 aa7.87□□□□□ -1.15
IRF1-211ENST00000613424 SMIM20Q8N5G0 67 aa7.85□□□□□ -1.15
IRF1-211ENST00000613424 TRAV7A0A075B6U4 112 aa7.84□□□□□ -1.15
IRF1-211ENST00000613424 CSAG1Q6PB30 78 aa7.82□□□□□ -1.16
IRF1-211ENST00000613424 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
IRF1-211ENST00000613424 KRTAP3-3Q9BYR6 98 aa7.81□□□□□ -1.16
IRF1-211ENST00000613424 A8MUN3 132 aa7.79□□□□□ -1.16
IRF1-211ENST00000613424 FSIP2Q5CZC0 6907 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms