RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 PCOTHQ58A44 107 aa4.42□□□□□ -1.7
PPARGC1A-217ENST00000613098 MGAM2Q2M2H8 2515 aa4.42□□□□□ -1.7
PPARGC1A-217ENST00000613098 DNAH11Q96DT5 4516 aa4.41□□□□□ -1.7
PPARGC1A-217ENST00000613098 PMAIP1Q13794 54 aa4.4□□□□□ -1.7
PPARGC1A-217ENST00000613098 Q75L30 129 aa4.4□□□□□ -1.7
PPARGC1A-217ENST00000613098 LIMD2Q9BT23 127 aa4.4□□□□□ -1.7
PPARGC1A-217ENST00000613098 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
PPARGC1A-217ENST00000613098 A0A1B0GVX0 72 aa4.4□□□□□ -1.71
PPARGC1A-217ENST00000613098 Q5W150 140 aa4.4□□□□□ -1.71
PPARGC1A-217ENST00000613098 UBE2DNLQ8IWF7 75 aa4.4□□□□□ -1.71
PPARGC1A-217ENST00000613098 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.71
PPARGC1A-217ENST00000613098 HRES1P13985 223 aa4.39□□□□□ -1.71
PPARGC1A-217ENST00000613098 DNAH5Q8TE73 4624 aa4.39□□□□□ -1.71
PPARGC1A-217ENST00000613098 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
PPARGC1A-217ENST00000613098 PSORS1C2Q9UIG4 136 aa4.38□□□□□ -1.71
PPARGC1A-217ENST00000613098 TP53AIP1Q9HCN2 124 aa4.38□□□□□ -1.71
PPARGC1A-217ENST00000613098 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
PPARGC1A-217ENST00000613098 IGHV6-1A0A0B4J1U7 121 aa4.38□□□□□ -1.71
PPARGC1A-217ENST00000613098 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
PPARGC1A-217ENST00000613098 MRPL34Q9BQ48 92 aaKnown RBP4.36□□□□□ -1.71
PPARGC1A-217ENST00000613098 A0A087WTM6 91 aa4.36□□□□□ -1.71
PPARGC1A-217ENST00000613098 LRP1BQ9NZR2 4599 aa4.35□□□□□ -1.71
PPARGC1A-217ENST00000613098 SPAG11AQ6PDA7 123 aa4.35□□□□□ -1.71
PPARGC1A-217ENST00000613098 A6NN06 94 aa4.35□□□□□ -1.71
PPARGC1A-217ENST00000613098 ZNF861PO60384 105 aa4.34□□□□□ -1.71
PPARGC1A-217ENST00000613098 SPINK7P58062 85 aa4.34□□□□□ -1.71
PPARGC1A-217ENST00000613098 RYR3Q15413 4870 aa4.34□□□□□ -1.72
PPARGC1A-217ENST00000613098 PKD1P98161 4303 aa4.33□□□□□ -1.72
PPARGC1A-217ENST00000613098 HERC2O95714 4834 aa4.33□□□□□ -1.72
PPARGC1A-217ENST00000613098 RTL8CO15255 209 aa4.32□□□□□ -1.72
PPARGC1A-217ENST00000613098 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
PPARGC1A-217ENST00000613098 MEGF8Q7Z7M0 2845 aa4.32□□□□□ -1.72
PPARGC1A-217ENST00000613098 NDUFS5O43920 106 aa4.32□□□□□ -1.72
PPARGC1A-217ENST00000613098 ATP11AUNQ6ZP68 121 aa4.32□□□□□ -1.72
PPARGC1A-217ENST00000613098 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
PPARGC1A-217ENST00000613098 A6NED7 52 aa4.31□□□□□ -1.72
PPARGC1A-217ENST00000613098 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
PPARGC1A-217ENST00000613098 ZNF706Q9Y5V0 76 aaPredicted RBP4.3□□□□□ -1.72
PPARGC1A-217ENST00000613098 NUPR2A6NF83 97 aa4.29□□□□□ -1.72
PPARGC1A-217ENST00000613098 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
PPARGC1A-217ENST00000613098 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
PPARGC1A-217ENST00000613098 SPTSSBQ8NFR3 76 aa4.29□□□□□ -1.72
PPARGC1A-217ENST00000613098 RYR2Q92736 4967 aa4.28□□□□□ -1.72
PPARGC1A-217ENST00000613098 H3BS24 57 aa4.28□□□□□ -1.72
PPARGC1A-217ENST00000613098 IGLV7-43P04211 117 aa4.28□□□□□ -1.72
PPARGC1A-217ENST00000613098 SPINK6Q6UWN8 80 aa4.28□□□□□ -1.72
PPARGC1A-217ENST00000613098 TGP01266 2768 aa4.27□□□□□ -1.73
PPARGC1A-217ENST00000613098 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
PPARGC1A-217ENST00000613098 KRTAP16-1A8MUX0 517 aa4.27□□□□□ -1.73
PPARGC1A-217ENST00000613098 KRTAP13-2Q52LG2 175 aa4.26□□□□□ -1.73
PPARGC1A-217ENST00000613098 DMAC1Q96GE9 116 aa4.25□□□□□ -1.73
PPARGC1A-217ENST00000613098 CIRBP-AS1Q8TBR5 109 aa4.25□□□□□ -1.73
PPARGC1A-217ENST00000613098 CDK2AP2O75956 126 aa4.25□□□□□ -1.73
PPARGC1A-217ENST00000613098 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
PPARGC1A-217ENST00000613098 KRTAP10-2P60368 255 aa4.23□□□□□ -1.73
PPARGC1A-217ENST00000613098 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
PPARGC1A-217ENST00000613098 SSBP3-AS1Q7Z2R9 100 aa4.21□□□□□ -1.73
PPARGC1A-217ENST00000613098 ACYP2P14621 99 aa4.21□□□□□ -1.74
PPARGC1A-217ENST00000613098 RETNLBQ9BQ08 111 aa4.21□□□□□ -1.74
PPARGC1A-217ENST00000613098 C8orf87E5RJ46 101 aa4.21□□□□□ -1.74
PPARGC1A-217ENST00000613098 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
PPARGC1A-217ENST00000613098 LINC00313P59037 77 aa4.2□□□□□ -1.74
PPARGC1A-217ENST00000613098 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
PPARGC1A-217ENST00000613098 J3QL48 77 aa4.18□□□□□ -1.74
PPARGC1A-217ENST00000613098 Q6ZSA8 131 aa4.18□□□□□ -1.74
PPARGC1A-217ENST00000613098 C1orf134Q5TEV5 83 aa4.17□□□□□ -1.74
PPARGC1A-217ENST00000613098 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
PPARGC1A-217ENST00000613098 FAM229AH3BQW9 127 aa4.17□□□□□ -1.74
PPARGC1A-217ENST00000613098 SPATA8Q6RVD6 105 aa4.16□□□□□ -1.74
PPARGC1A-217ENST00000613098 PKHD1P08F94 4074 aa4.16□□□□□ -1.74
PPARGC1A-217ENST00000613098 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
PPARGC1A-217ENST00000613098 SACSQ9NZJ4 4579 aa4.15□□□□□ -1.74
PPARGC1A-217ENST00000613098 PCLOQ9Y6V0 5065 aa4.14□□□□□ -1.75
PPARGC1A-217ENST00000613098 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
PPARGC1A-217ENST00000613098 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
PPARGC1A-217ENST00000613098 A0A1B0GU69 56 aa4.12□□□□□ -1.75
PPARGC1A-217ENST00000613098 PKHD1L1Q86WI1 4243 aa4.12□□□□□ -1.75
PPARGC1A-217ENST00000613098 PLA2G1BP04054 148 aaKnown RBP4.12□□□□□ -1.75
PPARGC1A-217ENST00000613098 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
PPARGC1A-217ENST00000613098 LY6G6CO95867 125 aa4.11□□□□□ -1.75
PPARGC1A-217ENST00000613098 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
PPARGC1A-217ENST00000613098 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
PPARGC1A-217ENST00000613098 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
PPARGC1A-217ENST00000613098 UQCR11O14957 56 aa4.06□□□□□ -1.76
PPARGC1A-217ENST00000613098 FAT1Q14517 4588 aa4.06□□□□□ -1.76
PPARGC1A-217ENST00000613098 Q8N1X5 172 aa4.06□□□□□ -1.76
PPARGC1A-217ENST00000613098 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
PPARGC1A-217ENST00000613098 DYNC1H1Q14204 4646 aaKnown RBP4.05□□□□□ -1.76
PPARGC1A-217ENST00000613098 SPINK1P00995 79 aa4.03□□□□□ -1.76
PPARGC1A-217ENST00000613098 H0YAA0 97 aa4.02□□□□□ -1.77
PPARGC1A-217ENST00000613098 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
PPARGC1A-217ENST00000613098 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
PPARGC1A-217ENST00000613098 A8MUU9 505 aa3.99□□□□□ -1.77
PPARGC1A-217ENST00000613098 RPS29P62273 56 aaKnown RBP3.99□□□□□ -1.77
PPARGC1A-217ENST00000613098 C20orf166-AS1Q96NR2 134 aa3.99□□□□□ -1.77
PPARGC1A-217ENST00000613098 LINC01554Q52M75 96 aa3.98□□□□□ -1.77
PPARGC1A-217ENST00000613098 CSAG1Q6PB30 78 aa3.98□□□□□ -1.77
PPARGC1A-217ENST00000613098 LINC00304Q8N9R0 145 aa3.97□□□□□ -1.77
PPARGC1A-217ENST00000613098 A0A1B0GVY2 172 aa3.97□□□□□ -1.77
PPARGC1A-217ENST00000613098 FAT3Q8TDW7 4589 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms