RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
CDC42EP3-206ENST00000611976 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
CDC42EP3-206ENST00000611976 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
CDC42EP3-206ENST00000611976 VPS13CQ709C8 3753 aa6.51□□□□□ -1.37
CDC42EP3-206ENST00000611976 NBEAL1Q6ZS30 2694 aa6.5□□□□□ -1.37
CDC42EP3-206ENST00000611976 A0A1B0GU33 70 aa6.5□□□□□ -1.37
CDC42EP3-206ENST00000611976 PANO1I0J062 215 aa6.48□□□□□ -1.37
CDC42EP3-206ENST00000611976 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
CDC42EP3-206ENST00000611976 KMT2BQ9UMN6 2715 aaPredicted RBP6.46□□□□□ -1.37
CDC42EP3-206ENST00000611976 ZFHX3Q15911 3703 aa6.45□□□□□ -1.38
CDC42EP3-206ENST00000611976 PRAC1Q96KF2 57 aa6.45□□□□□ -1.38
CDC42EP3-206ENST00000611976 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
CDC42EP3-206ENST00000611976 A0A0D9SG42 100 aa6.41□□□□□ -1.38
CDC42EP3-206ENST00000611976 ASB16-AS1Q495Z4 193 aa6.41□□□□□ -1.38
CDC42EP3-206ENST00000611976 PDZD2O15018 2839 aa6.4□□□□□ -1.38
CDC42EP3-206ENST00000611976 KRTAP13-1Q8IUC0 172 aa6.4□□□□□ -1.39
CDC42EP3-206ENST00000611976 A0A087X002 238 aa6.38□□□□□ -1.39
CDC42EP3-206ENST00000611976 NOTCH2NLQ7Z3S9 236 aa6.38□□□□□ -1.39
CDC42EP3-206ENST00000611976 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
CDC42EP3-206ENST00000611976 OTOGQ6ZRI0 2925 aa6.36□□□□□ -1.39
CDC42EP3-206ENST00000611976 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
CDC42EP3-206ENST00000611976 A6NN06 94 aa6.35□□□□□ -1.39
CDC42EP3-206ENST00000611976 KRTAP10-1P60331 282 aa6.34□□□□□ -1.39
CDC42EP3-206ENST00000611976 KRTAP10-2P60368 255 aa6.34□□□□□ -1.39
CDC42EP3-206ENST00000611976 SPATA8Q6RVD6 105 aa6.33□□□□□ -1.4
CDC42EP3-206ENST00000611976 TENM1Q9UKZ4 2725 aa6.33□□□□□ -1.4
CDC42EP3-206ENST00000611976 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
CDC42EP3-206ENST00000611976 S4R3F8 94 aa6.28□□□□□ -1.4
CDC42EP3-206ENST00000611976 ZNF469Q96JG9 3925 aaPredicted RBP6.27□□□□□ -1.41
CDC42EP3-206ENST00000611976 VWFP04275 2813 aa6.26□□□□□ -1.41
CDC42EP3-206ENST00000611976 J3QL48 77 aa6.26□□□□□ -1.41
CDC42EP3-206ENST00000611976 COX6B2Q6YFQ2 88 aa6.25□□□□□ -1.41
CDC42EP3-206ENST00000611976 Q6ZSA8 131 aa6.25□□□□□ -1.41
CDC42EP3-206ENST00000611976 RPS29P62273 56 aaKnown RBP6.24□□□□□ -1.41
CDC42EP3-206ENST00000611976 A8MU10 97 aa6.24□□□□□ -1.41
CDC42EP3-206ENST00000611976 FBN1P35555 2871 aaKnown RBP6.23□□□□□ -1.41
CDC42EP3-206ENST00000611976 RPL37P61927 97 aaKnown RBP6.22□□□□□ -1.41
CDC42EP3-206ENST00000611976 ROMO1P60602 79 aa6.21□□□□□ -1.42
CDC42EP3-206ENST00000611976 ANK3Q12955 4377 aaKnown RBP6.2□□□□□ -1.42
CDC42EP3-206ENST00000611976 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
CDC42EP3-206ENST00000611976 H3BS24 57 aa6.19□□□□□ -1.42
CDC42EP3-206ENST00000611976 STAB2Q8WWQ8 2551 aa6.18□□□□□ -1.42
CDC42EP3-206ENST00000611976 TRRAPQ9Y4A5 3859 aa6.18□□□□□ -1.42
CDC42EP3-206ENST00000611976 TENM3Q9P273 2699 aa6.13□□□□□ -1.43
CDC42EP3-206ENST00000611976 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
CDC42EP3-206ENST00000611976 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
CDC42EP3-206ENST00000611976 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
CDC42EP3-206ENST00000611976 Q5VSD8 79 aa6.09□□□□□ -1.43
CDC42EP3-206ENST00000611976 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
CDC42EP3-206ENST00000611976 AKAP9Q99996 3911 aa6.07□□□□□ -1.44
CDC42EP3-206ENST00000611976 R4GN34 69 aa6.06□□□□□ -1.44
CDC42EP3-206ENST00000611976 PKD1L1Q8TDX9 2849 aa6.05□□□□□ -1.44
CDC42EP3-206ENST00000611976 A8MUU9 505 aa6.01□□□□□ -1.45
CDC42EP3-206ENST00000611976 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
CDC42EP3-206ENST00000611976 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
CDC42EP3-206ENST00000611976 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
CDC42EP3-206ENST00000611976 M0QZ58 72 aa5.99□□□□□ -1.45
CDC42EP3-206ENST00000611976 KRTAP1-4P0C5Y4 121 aa5.97□□□□□ -1.45
CDC42EP3-206ENST00000611976 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
CDC42EP3-206ENST00000611976 KRTAP13-3Q3SY46 172 aa5.91□□□□□ -1.46
CDC42EP3-206ENST00000611976 TGP01266 2768 aa5.89□□□□□ -1.47
CDC42EP3-206ENST00000611976 TENM2Q9NT68 2774 aa5.89□□□□□ -1.47
CDC42EP3-206ENST00000611976 A0A0A0MQY5 61 aa5.87□□□□□ -1.47
CDC42EP3-206ENST00000611976 H0YAA0 97 aa5.86□□□□□ -1.47
CDC42EP3-206ENST00000611976 M0R2T5 61 aa5.81□□□□□ -1.48
CDC42EP3-206ENST00000611976 KRTAP21-3Q3LHN1 58 aa5.75□□□□□ -1.49
CDC42EP3-206ENST00000611976 XP32Q5T750 250 aa5.73□□□□□ -1.49
CDC42EP3-206ENST00000611976 NDUFAF8A1L188 74 aa5.72□□□□□ -1.49
CDC42EP3-206ENST00000611976 FLG2Q5D862 2391 aaPredicted RBP5.72□□□□□ -1.49
CDC42EP3-206ENST00000611976 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
CDC42EP3-206ENST00000611976 CSMD3Q7Z407 3707 aa5.67□□□□□ -1.5
CDC42EP3-206ENST00000611976 HUWE1Q7Z6Z7 4374 aaKnown RBP5.65□□□□□ -1.5
CDC42EP3-206ENST00000611976 C10orf95Q9H7T3 257 aa5.64□□□□□ -1.51
CDC42EP3-206ENST00000611976 FBN3Q75N90 2809 aa5.63□□□□□ -1.51
CDC42EP3-206ENST00000611976 PP632Q6XCG6 107 aa5.59□□□□□ -1.52
CDC42EP3-206ENST00000611976 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
CDC42EP3-206ENST00000611976 MEGF8Q7Z7M0 2845 aa5.58□□□□□ -1.52
CDC42EP3-206ENST00000611976 P0C880 135 aa5.57□□□□□ -1.52
CDC42EP3-206ENST00000611976 TNP1P09430 55 aa5.57□□□□□ -1.52
CDC42EP3-206ENST00000611976 COL7A1Q02388 2944 aa5.53□□□□□ -1.52
CDC42EP3-206ENST00000611976 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
CDC42EP3-206ENST00000611976 ANK2Q01484 3957 aa5.51□□□□□ -1.53
CDC42EP3-206ENST00000611976 KRTAP10-8P60410 259 aa5.51□□□□□ -1.53
CDC42EP3-206ENST00000611976 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
CDC42EP3-206ENST00000611976 DNAH9Q9NYC9 4486 aa5.51□□□□□ -1.53
CDC42EP3-206ENST00000611976 SRRM2Q9UQ35 2752 aaKnown RBP5.48□□□□□ -1.53
CDC42EP3-206ENST00000611976 DNHD1Q96M86 4753 aa5.46□□□□□ -1.54
CDC42EP3-206ENST00000611976 CMYA5Q8N3K9 4069 aa5.43□□□□□ -1.54
CDC42EP3-206ENST00000611976 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
CDC42EP3-206ENST00000611976 PLECQ15149 4684 aaKnown RBP5.42□□□□□ -1.54
CDC42EP3-206ENST00000611976 PRKDCP78527 4128 aaKnown RBP5.41□□□□□ -1.54
CDC42EP3-206ENST00000611976 DNAH10Q8IVF4 4471 aa5.39□□□□□ -1.55
CDC42EP3-206ENST00000611976 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
CDC42EP3-206ENST00000611976 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
CDC42EP3-206ENST00000611976 LYSTQ99698 3801 aa5.35□□□□□ -1.55
CDC42EP3-206ENST00000611976 STARD9Q9P2P6 4700 aa5.34□□□□□ -1.55
CDC42EP3-206ENST00000611976 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
CDC42EP3-206ENST00000611976 DNAH3Q8TD57 4116 aa5.29□□□□□ -1.56
CDC42EP3-206ENST00000611976 DNAH1Q9P2D7 4330 aa5.28□□□□□ -1.56
CDC42EP3-206ENST00000611976 KMT2AQ03164 3969 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms