RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 LCE2CQ5TA81 110 aa13.67□□□□□ -0.22
VEGFA-226ENST00000611736 H3BT86 120 aa13.66□□□□□ -0.22
VEGFA-226ENST00000611736 KRTAP16-1A8MUX0 517 aa13.63□□□□□ -0.23
VEGFA-226ENST00000611736 SPCS1Q9Y6A9 102 aa13.63□□□□□ -0.23
VEGFA-226ENST00000611736 COL5A1-AS1Q5SY13 56 aa13.62□□□□□ -0.23
VEGFA-226ENST00000611736 A0A1B0GVX0 72 aa13.61□□□□□ -0.23
VEGFA-226ENST00000611736 A0A1B0GW54 56 aa13.61□□□□□ -0.23
VEGFA-226ENST00000611736 J3KT08 172 aa13.61□□□□□ -0.23
VEGFA-226ENST00000611736 C8orf87E5RJ46 101 aa13.56□□□□□ -0.24
VEGFA-226ENST00000611736 COX6B2Q6YFQ2 88 aa13.52□□□□□ -0.25
VEGFA-226ENST00000611736 PCP4L1A6NKN8 68 aa13.51□□□□□ -0.25
VEGFA-226ENST00000611736 NDUFB1O75438 58 aa13.51□□□□□ -0.25
VEGFA-226ENST00000611736 MT1HP80294 61 aa13.49□□□□□ -0.25
VEGFA-226ENST00000611736 NREPQ16612 68 aa13.49□□□□□ -0.25
VEGFA-226ENST00000611736 A8MWP4 228 aa13.47□□□□□ -0.25
VEGFA-226ENST00000611736 SMCPP49901 116 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-226ENST00000611736 FLGP20930 4061 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-226ENST00000611736 IGKV3D-7A0A0C4DH55 119 aa13.43□□□□□ -0.26
VEGFA-226ENST00000611736 K7EP34 96 aa13.43□□□□□ -0.26
VEGFA-226ENST00000611736 C8orf17Q9NRJ1 99 aa13.4□□□□□ -0.26
VEGFA-226ENST00000611736 PRO0461Q9UI25 63 aa13.39□□□□□ -0.27
VEGFA-226ENST00000611736 PRR15Q8IV56 129 aa13.36□□□□□ -0.27
VEGFA-226ENST00000611736 M0R2T5 61 aa13.31□□□□□ -0.28
VEGFA-226ENST00000611736 Q8N9P0 234 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-226ENST00000611736 GTF2H5Q6ZYL4 71 aa13.3□□□□□ -0.28
VEGFA-226ENST00000611736 ZCCHC13Q8WW36 166 aaKnown RBP13.3□□□□□ -0.28
VEGFA-226ENST00000611736 Q6ZVQ6 151 aa13.29□□□□□ -0.28
VEGFA-226ENST00000611736 BPY2O14599 106 aa13.28□□□□□ -0.28
VEGFA-226ENST00000611736 K7EQZ3 153 aa13.27□□□□□ -0.29
VEGFA-226ENST00000611736 LCE2DQ5TA82 110 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-226ENST00000611736 MMP24-AS1A0A0U1RRL7 71 aa13.25□□□□□ -0.29
VEGFA-226ENST00000611736 KRTAP9-6A0A140TA67 174 aa13.24□□□□□ -0.29
VEGFA-226ENST00000611736 KRTAP10-6P60371 365 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-226ENST00000611736 TMEM254Q8TBM7 123 aa13.2□□□□□ -0.3
VEGFA-226ENST00000611736 HRES1P13985 223 aa13.19□□□□□ -0.3
VEGFA-226ENST00000611736 MRPL34Q9BQ48 92 aaKnown RBP13.18□□□□□ -0.3
VEGFA-226ENST00000611736 hDV103S1A0JD37 113 aa13.17□□□□□ -0.3
VEGFA-226ENST00000611736 LINC00846Q9NV44 126 aa13.17□□□□□ -0.3
VEGFA-226ENST00000611736 FAM236DA0A1B0GTK5 79 aa13.16□□□□□ -0.3
VEGFA-226ENST00000611736 F8W1H4 67 aa13.16□□□□□ -0.3
VEGFA-226ENST00000611736 FAM236CP0DP71 79 aa13.16□□□□□ -0.3
VEGFA-226ENST00000611736 LORP23490 312 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-226ENST00000611736 Q8N9L7 120 aa13.15□□□□□ -0.3
VEGFA-226ENST00000611736 RBM12B-AS1Q9P1G2 102 aa13.14□□□□□ -0.31
VEGFA-226ENST00000611736 UBL5Q9BZL1 73 aa13.13□□□□□ -0.31
VEGFA-226ENST00000611736 SPINK7P58062 85 aa13.12□□□□□ -0.31
VEGFA-226ENST00000611736 MPLKIPQ8TAP9 179 aa13.12□□□□□ -0.31
VEGFA-226ENST00000611736 ETDBQ3ZM63 59 aa13.11□□□□□ -0.31
VEGFA-226ENST00000611736 NDUFS5O43920 106 aa13.1□□□□□ -0.31
VEGFA-226ENST00000611736 WFDC13Q8IUB5 93 aa13.07□□□□□ -0.32
VEGFA-226ENST00000611736 CASC2Q6XLA1 102 aa13.03□□□□□ -0.32
VEGFA-226ENST00000611736 HCG22E2RYF7 251 aa12.94□□□□□ -0.34
VEGFA-226ENST00000611736 CRCT1Q9UGL9 99 aa12.93□□□□□ -0.34
VEGFA-226ENST00000611736 Q5W150 140 aa12.9□□□□□ -0.34
VEGFA-226ENST00000611736 IGKV2D-30A0A075B6S6 120 aa12.85□□□□□ -0.35
VEGFA-226ENST00000611736 IGKV2-30P06310 120 aa12.85□□□□□ -0.35
VEGFA-226ENST00000611736 CXCL6P80162 114 aa12.85□□□□□ -0.35
VEGFA-226ENST00000611736 FSIP2Q5CZC0 6907 aa12.8□□□□□ -0.36
VEGFA-226ENST00000611736 C7orf65Q6ZTY9 151 aa12.79□□□□□ -0.36
VEGFA-226ENST00000611736 KRTAP9-8Q9BYQ0 159 aa12.79□□□□□ -0.36
VEGFA-226ENST00000611736 A0A1B0GV90 55 aa12.76□□□□□ -0.37
VEGFA-226ENST00000611736 ACYP1P07311 99 aa12.76□□□□□ -0.37
VEGFA-226ENST00000611736 FAM240AA0A1B0GVK7 77 aa12.72□□□□□ -0.37
VEGFA-226ENST00000611736 MT2AP02795 61 aa12.66□□□□□ -0.38
VEGFA-226ENST00000611736 TP53AIP1Q9HCN2 124 aa12.64□□□□□ -0.39
VEGFA-226ENST00000611736 H1FX-AS1Q4G0G2 97 aa12.63□□□□□ -0.39
VEGFA-226ENST00000611736 ATP5EP2Q5VTU8 51 aa12.61□□□□□ -0.39
VEGFA-226ENST00000611736 C4orf26Q17RF5 130 aa12.59□□□□□ -0.39
VEGFA-226ENST00000611736 MT1FP04733 61 aa12.57□□□□□ -0.4
VEGFA-226ENST00000611736 HIST1H4AP62805 103 aaKnown RBP12.56□□□□□ -0.4
VEGFA-226ENST00000611736 KRTAP10-10P60014 251 aa12.53□□□□□ -0.4
VEGFA-226ENST00000611736 LINC00643Q86TS7 51 aa12.49□□□□□ -0.41
VEGFA-226ENST00000611736 A0A087WVE0 104 aa12.41□□□□□ -0.42
VEGFA-226ENST00000611736 TRAV22A0A0B4J277 110 aa12.41□□□□□ -0.42
VEGFA-226ENST00000611736 USH2AO75445 5202 aa12.39□□□□□ -0.43
VEGFA-226ENST00000611736 KRTAP9-3Q9BYQ3 159 aa12.39□□□□□ -0.43
VEGFA-226ENST00000611736 C1orf64Q8NEQ6 169 aa12.38□□□□□ -0.43
VEGFA-226ENST00000611736 KRTAP3-1Q9BYR8 98 aa12.38□□□□□ -0.43
VEGFA-226ENST00000611736 CYP4F30PQ9H0H9 118 aa12.36□□□□□ -0.43
VEGFA-226ENST00000611736 J3QR89 54 aa12.34□□□□□ -0.43
VEGFA-226ENST00000611736 UQCRQO14949 82 aa12.33□□□□□ -0.44
VEGFA-226ENST00000611736 LOC101927531A0A1B0GV80 90 aa12.3□□□□□ -0.44
VEGFA-226ENST00000611736 LCE2BO14633 110 aa12.29□□□□□ -0.44
VEGFA-226ENST00000611736 H0Y9P7 68 aa12.28□□□□□ -0.44
VEGFA-226ENST00000611736 S4R3F8 94 aa12.27□□□□□ -0.45
VEGFA-226ENST00000611736 C5orf47Q569G3 176 aa12.25□□□□□ -0.45
VEGFA-226ENST00000611736 SSPOA2VEC9 5147 aa12.24□□□□□ -0.45
VEGFA-226ENST00000611736 ATOX1O00244 68 aa12.23□□□□□ -0.45
VEGFA-226ENST00000611736 LCA10Q71F78 164 aa12.18□□□□□ -0.46
VEGFA-226ENST00000611736 OCR1Q9BZK8 76 aa12.14□□□□□ -0.47
VEGFA-226ENST00000611736 CSAG1Q6PB30 78 aa12.12□□□□□ -0.47
VEGFA-226ENST00000611736 LINC00208Q96KT6 92 aa12.1□□□□□ -0.47
VEGFA-226ENST00000611736 MP68P56378 58 aa12.06□□□□□ -0.48
VEGFA-226ENST00000611736 FAM236AA0A1B0GUQ0 79 aa12.03□□□□□ -0.48
VEGFA-226ENST00000611736 FAM236BA0A1B0GV22 79 aa12.03□□□□□ -0.48
VEGFA-226ENST00000611736 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-226ENST00000611736 KLKP1Q107X0 134 aa12.01□□□□□ -0.49
VEGFA-226ENST00000611736 KRTAP19-1Q8IUB9 90 aa12.01□□□□□ -0.49
VEGFA-226ENST00000611736 KRTAP3-3Q9BYR6 98 aa12.01□□□□□ -0.49
VEGFA-226ENST00000611736 SCGB1A1P11684 91 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms