RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 C8orf87E5RJ46 101 aa6.12□□□□□ -1.43
PABPC1-224ENST00000610907 KRTAP10-1P60331 282 aa6.12□□□□□ -1.43
PABPC1-224ENST00000610907 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
PABPC1-224ENST00000610907 IGLV7-46A0A075B6I9 117 aa6.11□□□□□ -1.43
PABPC1-224ENST00000610907 Q1T7F1 81 aa6.11□□□□□ -1.43
PABPC1-224ENST00000610907 NDUFS5O43920 106 aa6.1□□□□□ -1.43
PABPC1-224ENST00000610907 PRR4Q16378 134 aa6.1□□□□□ -1.43
PABPC1-224ENST00000610907 MPLKIPQ8TAP9 179 aa6.1□□□□□ -1.43
PABPC1-224ENST00000610907 DNAH5Q8TE73 4624 aa6.09□□□□□ -1.43
PABPC1-224ENST00000610907 V9GYY9 64 aa6.09□□□□□ -1.43
PABPC1-224ENST00000610907 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
PABPC1-224ENST00000610907 KMT2CQ8NEZ4 4911 aaKnown RBP6.08□□□□□ -1.44
PABPC1-224ENST00000610907 SPINK6Q6UWN8 80 aa6.08□□□□□ -1.44
PABPC1-224ENST00000610907 A0A087X002 238 aa6.07□□□□□ -1.44
PABPC1-224ENST00000610907 NOTCH2NLQ7Z3S9 236 aa6.07□□□□□ -1.44
PABPC1-224ENST00000610907 FRAS1Q86XX4 4008 aa6.07□□□□□ -1.44
PABPC1-224ENST00000610907 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
PABPC1-224ENST00000610907 KRTAP13-2Q52LG2 175 aa6.06□□□□□ -1.44
PABPC1-224ENST00000610907 C1orf195Q5TG92 126 aa6.05□□□□□ -1.44
PABPC1-224ENST00000610907 LINC00336Q6ZUF6 198 aa6.05□□□□□ -1.44
PABPC1-224ENST00000610907 LIMD2Q9BT23 127 aa6.05□□□□□ -1.44
PABPC1-224ENST00000610907 KRTAP1-4P0C5Y4 121 aa6.04□□□□□ -1.44
PABPC1-224ENST00000610907 LINC00313P59037 77 aa6.04□□□□□ -1.44
PABPC1-224ENST00000610907 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
PABPC1-224ENST00000610907 RYR3Q15413 4870 aa6.03□□□□□ -1.44
PABPC1-224ENST00000610907 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.45
PABPC1-224ENST00000610907 PCOTHQ58A44 107 aa6.02□□□□□ -1.45
PABPC1-224ENST00000610907 PKD1P98161 4303 aa6.02□□□□□ -1.45
PABPC1-224ENST00000610907 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
PABPC1-224ENST00000610907 FAT2Q9NYQ8 4349 aa6□□□□□ -1.45
PABPC1-224ENST00000610907 FAM229AH3BQW9 127 aa6□□□□□ -1.45
PABPC1-224ENST00000610907 COA5Q86WW8 74 aa6□□□□□ -1.45
PABPC1-224ENST00000610907 SPINK1P00995 79 aa5.99□□□□□ -1.45
PABPC1-224ENST00000610907 PLA2G1BP04054 148 aaKnown RBP5.99□□□□□ -1.45
PABPC1-224ENST00000610907 Q5W150 140 aa5.99□□□□□ -1.45
PABPC1-224ENST00000610907 LRP1BQ9NZR2 4599 aa5.99□□□□□ -1.45
PABPC1-224ENST00000610907 TYMSOSQ8TAI1 123 aa5.97□□□□□ -1.45
PABPC1-224ENST00000610907 RPS29P62273 56 aaKnown RBP5.97□□□□□ -1.45
PABPC1-224ENST00000610907 RYR2Q92736 4967 aa5.96□□□□□ -1.46
PABPC1-224ENST00000610907 BRK1Q8WUW1 75 aa5.96□□□□□ -1.46
PABPC1-224ENST00000610907 HYDINQ4G0P3 5121 aa5.95□□□□□ -1.46
PABPC1-224ENST00000610907 KRTAP16-1A8MUX0 517 aa5.94□□□□□ -1.46
PABPC1-224ENST00000610907 SPAG11AQ6PDA7 123 aa5.94□□□□□ -1.46
PABPC1-224ENST00000610907 SACSQ9NZJ4 4579 aa5.94□□□□□ -1.46
PABPC1-224ENST00000610907 PSPHP1O15172 72 aa5.93□□□□□ -1.46
PABPC1-224ENST00000610907 HRES1P13985 223 aa5.93□□□□□ -1.46
PABPC1-224ENST00000610907 A8MUN3 132 aa5.92□□□□□ -1.46
PABPC1-224ENST00000610907 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
PABPC1-224ENST00000610907 IGKV2-30P06310 120 aa5.91□□□□□ -1.46
PABPC1-224ENST00000610907 ACYP2P14621 99 aa5.9□□□□□ -1.46
PABPC1-224ENST00000610907 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.47
PABPC1-224ENST00000610907 Q5VV11 94 aa5.89□□□□□ -1.47
PABPC1-224ENST00000610907 LINC00304Q8N9R0 145 aa5.89□□□□□ -1.47
PABPC1-224ENST00000610907 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
PABPC1-224ENST00000610907 A0A1B0GVY2 172 aa5.89□□□□□ -1.47
PABPC1-224ENST00000610907 Q75L30 129 aa5.87□□□□□ -1.47
PABPC1-224ENST00000610907 DMAC1Q96GE9 116 aa5.87□□□□□ -1.47
PABPC1-224ENST00000610907 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
PABPC1-224ENST00000610907 PRR26Q8N8Z3 221 aa5.86□□□□□ -1.47
PABPC1-224ENST00000610907 EPPK1P58107 5090 aaKnown RBP5.85□□□□□ -1.47
PABPC1-224ENST00000610907 CHKB-CPT1BH3BT56 60 aa5.84□□□□□ -1.47
PABPC1-224ENST00000610907 J3QL48 77 aa5.82□□□□□ -1.48
PABPC1-224ENST00000610907 SMR3BP02814 79 aaPredicted RBP5.82□□□□□ -1.48
PABPC1-224ENST00000610907 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
PABPC1-224ENST00000610907 RETNLBQ9BQ08 111 aa5.82□□□□□ -1.48
PABPC1-224ENST00000610907 DYNC1H1Q14204 4646 aaKnown RBP5.8□□□□□ -1.48
PABPC1-224ENST00000610907 IGKV2D-30A0A075B6S6 120 aa5.78□□□□□ -1.48
PABPC1-224ENST00000610907 PKHD1P08F94 4074 aa5.78□□□□□ -1.48
PABPC1-224ENST00000610907 A6NED7 52 aa5.76□□□□□ -1.49
PABPC1-224ENST00000610907 LCE2CQ5TA81 110 aa5.76□□□□□ -1.49
PABPC1-224ENST00000610907 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
PABPC1-224ENST00000610907 A8MUU9 505 aa5.75□□□□□ -1.49
PABPC1-224ENST00000610907 C20orf166-AS1Q96NR2 134 aa5.75□□□□□ -1.49
PABPC1-224ENST00000610907 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
PABPC1-224ENST00000610907 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
PABPC1-224ENST00000610907 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
PABPC1-224ENST00000610907 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
PABPC1-224ENST00000610907 LCA10Q71F78 164 aa5.72□□□□□ -1.49
PABPC1-224ENST00000610907 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
PABPC1-224ENST00000610907 A0A1B0GU69 56 aa5.67□□□□□ -1.5
PABPC1-224ENST00000610907 SPINK7P58062 85 aa5.67□□□□□ -1.5
PABPC1-224ENST00000610907 FAT1Q14517 4588 aa5.67□□□□□ -1.5
PABPC1-224ENST00000610907 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
PABPC1-224ENST00000610907 A8MU10 97 aa5.67□□□□□ -1.5
PABPC1-224ENST00000610907 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
PABPC1-224ENST00000610907 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
PABPC1-224ENST00000610907 SPTSSBQ8NFR3 76 aa5.64□□□□□ -1.51
PABPC1-224ENST00000610907 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
PABPC1-224ENST00000610907 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
PABPC1-224ENST00000610907 Q8N1X5 172 aa5.61□□□□□ -1.51
PABPC1-224ENST00000610907 Q5VSD8 79 aa5.59□□□□□ -1.51
PABPC1-224ENST00000610907 FLG2Q5D862 2391 aaPredicted RBP5.59□□□□□ -1.51
PABPC1-224ENST00000610907 KIAA1109Q2LD37 5005 aa5.59□□□□□ -1.51
PABPC1-224ENST00000610907 UQCR11O14957 56 aa5.59□□□□□ -1.52
PABPC1-224ENST00000610907 SPATA8Q6RVD6 105 aa5.59□□□□□ -1.52
PABPC1-224ENST00000610907 A6NN06 94 aa5.58□□□□□ -1.52
PABPC1-224ENST00000610907 SEC61GP60059 68 aa5.57□□□□□ -1.52
PABPC1-224ENST00000610907 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
PABPC1-224ENST00000610907 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
PABPC1-224ENST00000610907 HERC2O95714 4834 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms