RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 KRTAP1-4P0C5Y4 121 aa10.72□□□□□ -0.69
SNAPC3-207ENST00000610884 MP68P56378 58 aa10.72□□□□□ -0.69
SNAPC3-207ENST00000610884 PLA2G1BP04054 148 aaKnown RBP10.7□□□□□ -0.7
SNAPC3-207ENST00000610884 LINC00208Q96KT6 92 aa10.7□□□□□ -0.7
SNAPC3-207ENST00000610884 KRTAP17-1Q9BYP8 105 aa10.7□□□□□ -0.7
SNAPC3-207ENST00000610884 HSPG2P98160 4391 aa10.69□□□□□ -0.7
SNAPC3-207ENST00000610884 CYP4F30PQ9H0H9 118 aa10.69□□□□□ -0.7
SNAPC3-207ENST00000610884 TRAV22A0A0B4J277 110 aa10.68□□□□□ -0.7
SNAPC3-207ENST00000610884 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
SNAPC3-207ENST00000610884 NDUFB1O75438 58 aa10.68□□□□□ -0.7
SNAPC3-207ENST00000610884 CASC2Q6XLA1 102 aa10.68□□□□□ -0.7
SNAPC3-207ENST00000610884 Q1T7F1 81 aa10.66□□□□□ -0.7
SNAPC3-207ENST00000610884 KRTAP10-4P60372 401 aaPredicted RBP10.66□□□□□ -0.7
SNAPC3-207ENST00000610884 PRR15Q8IV56 129 aa10.66□□□□□ -0.7
SNAPC3-207ENST00000610884 H0Y9P7 68 aa10.65□□□□□ -0.7
SNAPC3-207ENST00000610884 PRR26Q8N8Z3 221 aa10.65□□□□□ -0.7
SNAPC3-207ENST00000610884 PSPHP1O15172 72 aa10.64□□□□□ -0.71
SNAPC3-207ENST00000610884 LRP1Q07954 4544 aaKnown RBP10.63□□□□□ -0.71
SNAPC3-207ENST00000610884 A8MWP4 228 aa10.63□□□□□ -0.71
SNAPC3-207ENST00000610884 SPINK6Q6UWN8 80 aa10.63□□□□□ -0.71
SNAPC3-207ENST00000610884 LINC00472Q9H8W2 130 aa10.62□□□□□ -0.71
SNAPC3-207ENST00000610884 RYR1P21817 5038 aa10.62□□□□□ -0.71
SNAPC3-207ENST00000610884 FLG2Q5D862 2391 aaPredicted RBP10.61□□□□□ -0.71
SNAPC3-207ENST00000610884 Q96NJ1 140 aa10.59□□□□□ -0.71
SNAPC3-207ENST00000610884 C1orf195Q5TG92 126 aa10.57□□□□□ -0.72
SNAPC3-207ENST00000610884 TYMSOSQ8TAI1 123 aa10.56□□□□□ -0.72
SNAPC3-207ENST00000610884 MMP24-AS1A0A0U1RRL7 71 aa10.54□□□□□ -0.72
SNAPC3-207ENST00000610884 H3BPC8 53 aa10.54□□□□□ -0.72
SNAPC3-207ENST00000610884 SSBP3-AS1Q7Z2R9 100 aa10.53□□□□□ -0.72
SNAPC3-207ENST00000610884 MYCBP2O75592 4640 aa10.53□□□□□ -0.72
SNAPC3-207ENST00000610884 SPANXA2-OT1Q8N9U9 137 aa10.53□□□□□ -0.72
SNAPC3-207ENST00000610884 A8MUN3 132 aa10.52□□□□□ -0.72
SNAPC3-207ENST00000610884 PKHD1L1Q86WI1 4243 aa10.52□□□□□ -0.73
SNAPC3-207ENST00000610884 Q5VSD8 79 aa10.52□□□□□ -0.73
SNAPC3-207ENST00000610884 NOTCH2NLQ7Z3S9 236 aa10.5□□□□□ -0.73
SNAPC3-207ENST00000610884 IGHV6-1A0A0B4J1U7 121 aa10.48□□□□□ -0.73
SNAPC3-207ENST00000610884 FAM229AH3BQW9 127 aa10.48□□□□□ -0.73
SNAPC3-207ENST00000610884 V9GYY9 64 aa10.47□□□□□ -0.73
SNAPC3-207ENST00000610884 Q5VV11 94 aa10.44□□□□□ -0.74
SNAPC3-207ENST00000610884 PCOTHQ58A44 107 aa10.43□□□□□ -0.74
SNAPC3-207ENST00000610884 Q8N9P0 234 aaPredicted RBP10.43□□□□□ -0.74
SNAPC3-207ENST00000610884 CDK2AP2O75956 126 aa10.42□□□□□ -0.74
SNAPC3-207ENST00000610884 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
SNAPC3-207ENST00000610884 A8MU10 97 aa10.4□□□□□ -0.74
SNAPC3-207ENST00000610884 COA5Q86WW8 74 aa10.4□□□□□ -0.75
SNAPC3-207ENST00000610884 PRR15LQ9BU68 103 aa10.39□□□□□ -0.75
SNAPC3-207ENST00000610884 C8orf17Q9NRJ1 99 aa10.39□□□□□ -0.75
SNAPC3-207ENST00000610884 DMBT1Q9UGM3 2413 aaPredicted RBP10.39□□□□□ -0.75
SNAPC3-207ENST00000610884 CD164Q04900 197 aa10.38□□□□□ -0.75
SNAPC3-207ENST00000610884 LINC00304Q8N9R0 145 aa10.38□□□□□ -0.75
SNAPC3-207ENST00000610884 IGLV7-46A0A075B6I9 117 aa10.38□□□□□ -0.75
SNAPC3-207ENST00000610884 NDUFS5O43920 106 aa10.38□□□□□ -0.75
SNAPC3-207ENST00000610884 RETNLBQ9BQ08 111 aa10.37□□□□□ -0.75
SNAPC3-207ENST00000610884 LIMD2Q9BT23 127 aa10.37□□□□□ -0.75
SNAPC3-207ENST00000610884 CHKB-CPT1BH3BT56 60 aa10.36□□□□□ -0.75
SNAPC3-207ENST00000610884 ASB16-AS1Q495Z4 193 aa10.36□□□□□ -0.75
SNAPC3-207ENST00000610884 KRTAP4-5Q9BYR2 181 aa10.35□□□□□ -0.75
SNAPC3-207ENST00000610884 TP53AIP1Q9HCN2 124 aa10.35□□□□□ -0.75
SNAPC3-207ENST00000610884 A0A1B0GVX0 72 aa10.35□□□□□ -0.75
SNAPC3-207ENST00000610884 TNXBP22105 4242 aa10.33□□□□□ -0.76
SNAPC3-207ENST00000610884 Q8N1X5 172 aa10.31□□□□□ -0.76
SNAPC3-207ENST00000610884 SPINK1P00995 79 aa10.3□□□□□ -0.76
SNAPC3-207ENST00000610884 PMAIP1Q13794 54 aa10.28□□□□□ -0.76
SNAPC3-207ENST00000610884 MRPL34Q9BQ48 92 aaKnown RBP10.27□□□□□ -0.77
SNAPC3-207ENST00000610884 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
SNAPC3-207ENST00000610884 Q75L30 129 aa10.24□□□□□ -0.77
SNAPC3-207ENST00000610884 SPAG11AQ6PDA7 123 aa10.24□□□□□ -0.77
SNAPC3-207ENST00000610884 ABCA13Q86UQ4 5058 aa10.23□□□□□ -0.77
SNAPC3-207ENST00000610884 A6NED7 52 aa10.23□□□□□ -0.77
SNAPC3-207ENST00000610884 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
SNAPC3-207ENST00000610884 SPTSSBQ8NFR3 76 aa10.2□□□□□ -0.78
SNAPC3-207ENST00000610884 LINC00313P59037 77 aa10.19□□□□□ -0.78
SNAPC3-207ENST00000610884 C9orf92A6NGG3 77 aa10.19□□□□□ -0.78
SNAPC3-207ENST00000610884 HRES1P13985 223 aa10.19□□□□□ -0.78
SNAPC3-207ENST00000610884 LCA10Q71F78 164 aa10.19□□□□□ -0.78
SNAPC3-207ENST00000610884 KRTAP10-8P60410 259 aa10.18□□□□□ -0.78
SNAPC3-207ENST00000610884 SEC61GP60059 68 aa10.16□□□□□ -0.78
SNAPC3-207ENST00000610884 LINC01558Q9Y6Z2 57 aa10.15□□□□□ -0.78
SNAPC3-207ENST00000610884 Q5W150 140 aa10.14□□□□□ -0.79
SNAPC3-207ENST00000610884 MT1HL1P0DM35 61 aa10.11□□□□□ -0.79
SNAPC3-207ENST00000610884 ATP11AUNQ6ZP68 121 aa10.09□□□□□ -0.79
SNAPC3-207ENST00000610884 KRTAP16-1A8MUX0 517 aa10.08□□□□□ -0.8
SNAPC3-207ENST00000610884 CDC42SE1Q9NRR8 79 aa10.08□□□□□ -0.8
SNAPC3-207ENST00000610884 KRTAP13-3Q3SY46 172 aa10.08□□□□□ -0.8
SNAPC3-207ENST00000610884 BIRC6Q9NR09 4857 aa10.06□□□□□ -0.8
SNAPC3-207ENST00000610884 HERC2O95714 4834 aa10.06□□□□□ -0.8
SNAPC3-207ENST00000610884 SPINK7P58062 85 aa10.06□□□□□ -0.8
SNAPC3-207ENST00000610884 RPS29P62273 56 aaKnown RBP10.05□□□□□ -0.8
SNAPC3-207ENST00000610884 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
SNAPC3-207ENST00000610884 KTN1-AS1Q86SY8 53 aa10.01□□□□□ -0.81
SNAPC3-207ENST00000610884 PCLOQ9Y6V0 5065 aa10.01□□□□□ -0.81
SNAPC3-207ENST00000610884 A6NN06 94 aa9.99□□□□□ -0.81
SNAPC3-207ENST00000610884 ACYP2P14621 99 aa9.96□□□□□ -0.81
SNAPC3-207ENST00000610884 LPAP08519 4548 aa9.96□□□□□ -0.81
SNAPC3-207ENST00000610884 DMAC1Q96GE9 116 aa9.91□□□□□ -0.82
SNAPC3-207ENST00000610884 IGKV2D-30A0A075B6S6 120 aa9.86□□□□□ -0.83
SNAPC3-207ENST00000610884 IGKV2-30P06310 120 aa9.86□□□□□ -0.83
SNAPC3-207ENST00000610884 LRP2P98164 4655 aa9.84□□□□□ -0.83
SNAPC3-207ENST00000610884 RBM12B-AS1Q9P1G2 102 aa9.84□□□□□ -0.83
SNAPC3-207ENST00000610884 C7orf65Q6ZTY9 151 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms